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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0196229 |
| Transcript ID | Lj0g3v0196229.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g48740-like [Glycine max] gi|356559015|ref|XP_003547797.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 22 | 22 | – | – | |
| Phobius | 1 | 5 | 5 | – | – | |
| Phobius | 1 | 22 | 22 | – | – | |
| PANTHER | 5 | 404 | 400 | 0 | – | |
| PANTHER | 5 | 404 | 400 | 0 | – | |
| Phobius | 6 | 17 | 12 | – | – | |
| TMHMM | 7 | 29 | 23 | – | – | |
| Phobius | 18 | 22 | 5 | – | – | |
| Phobius | 23 | 275 | 253 | – | – | |
| Pfam | 31 | 346 | 316 | 6.40E-55 | ||
| Phobius | 276 | 296 | 21 | – | – | |
| TMHMM | 276 | 298 | 23 | – | – | |
| Phobius | 297 | 554 | 258 | – | – | |
| SUPERFAMILY | 362 | 507 | 146 | 7.18E-27 | ||
| Gene3D | 364 | 506 | 143 | 5.10E-28 | ||
| ProSiteProfiles | 416 | 438 | 23 | 6.318 | ||
| PANTHER | 428 | 505 | 78 | 0 | – | |
| PANTHER | 428 | 505 | 78 | 0 | – | |
| SMART | 437 | 459 | 23 | 2 | ||
| ProSiteProfiles | 439 | 461 | 23 | 7.627 | ||
| Pfam | 439 | 497 | 59 | 4.30E-09 | ||
| SMART | 460 | 483 | 24 | 12 | ||
| ProSiteProfiles | 462 | 483 | 22 | 5.833 | ||
| SMART | 484 | 507 | 24 | 210 | ||
| ProSiteProfiles | 486 | 507 | 22 | 5.648 | ||
| Gene3D | 534 | 629 | 96 | 1.90E-12 | ||
| PANTHER | 547 | 790 | 244 | 0 | – | |
| PANTHER | 547 | 790 | 244 | 0 | – | |
| TMHMM | 555 | 577 | 23 | – | – | |
| Phobius | 555 | 579 | 25 | – | – | |
| Phobius | 580 | 804 | 225 | – | – | |
| SUPERFAMILY | 596 | 794 | 199 | 1.11E-58 | ||
| SMART | 616 | 803 | 188 | 5.60E-11 | ||
| ProSiteProfiles | 616 | 804 | 189 | 31.411 | ||
| Pfam | 618 | 791 | 174 | 9.80E-35 | ||
| ProSitePatterns | 622 | 644 | 23 | – | ||
| Gene3D | 630 | 680 | 51 | 1.20E-22 | – | |
| Gene3D | 681 | 793 | 113 | 6.00E-29 | – | |
| ProSitePatterns | 738 | 750 | 13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj0g3v0196229.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0196229.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.