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Lj0g3v0205339.1

Overview

Field Value
Gene ID Lj0g3v0205339
Transcript ID Lj0g3v0205339.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: wall-associated receptor kinase-like 8-like [Glycine max] gi|356532449|ref|XP_003534785.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius
CYTOPLASMIC_DOMAIN
1 68 68 – –
PANTHER
PTHR27005
3 372 370 2.90E-240 –
PANTHER
PTHR27005:SF7
3 372 370 2.90E-240 –
Gene3D
G3DSA:2.60.120.200
67 153 87 3.80E-08
IPR013320
TMHMM
TMhelix
69 91 23 – –
Phobius
TRANSMEMBRANE
69 94 26 – –
Phobius
NON_CYTOPLASMIC_DOMAIN
95 372 278 – –
SUPERFAMILY
SSF56112
130 354 225 7.96E-77
IPR011009
SMART
SM00220
147 361 215 2.20E-29
IPR000719
ProSiteProfiles
PS50011
147 372 226 37.729
IPR000719
Pfam
PF07714
149 354 206 3.00E-45
IPR001245
Gene3D
G3DSA:3.30.200.20
154 206 53 8.40E-25 –
Gene3D
G3DSA:1.10.510.10
207 353 147 8.30E-44 –
ProSitePatterns
PS00108
266 278 13 –
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 3

Expression data

Expression pattern

Expression pattern of Lj0g3v0205339.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0205339.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.