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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR000719
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 3339 results. Now displaying 11 of 67 with 50 rows per page. This search has taken 5.900s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v2312930.1
n.a. n.a. chr1 27184595 27206641 -
4 domain predictions
3 GO terms
Lj1g3v2312950.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Glycine max] gi|356523290|ref|XP_003530273.1| chr1 27196031 27207565 +
4 domain predictions
3 GO terms
Lj1g3v2313000.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840-like isoform X2 [Cicer arietinum] gi|502104059|ref|XP_004492426.1| chr1 27232813 27236764 -
3 domain predictions
3 GO terms
Lj1g3v2372440.1
n.a. PREDICTED: lectin-domain containing receptor kinase VI.3-like [Glycine max] gi|356566703|ref|XP_003551569.1| chr1 27925423 27927990 -
4 domain predictions
3 GO terms
Lj1g3v2372440.2
n.a. PREDICTED: lectin-domain containing receptor kinase VI.3-like [Glycine max] gi|356566703|ref|XP_003551569.1| chr1 27925423 27927990 -
4 domain predictions
3 GO terms
Lj1g3v2377960.1
n.a. PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830-like [Glycine max] gi|356521068|ref|XP_003529180.1| chr1 28075457 28079707 +
4 domain predictions
3 GO terms
Lj1g3v2377960.2
n.a. Receptor protein kinase-like protein [Medicago truncatula] gi|357506189|ref|XP_003623383.1| chr1 28075457 28082926 +
4 domain predictions
3 GO terms
Lj1g3v2404330.1
n.a. PREDICTED: dual specificity protein kinase pyk1-like [Glycine max] gi|356497930|ref|XP_003517809.1| chr1 28252845 28256855 -
2 domain predictions
3 GO terms
Lj1g3v2449150.1
n.a. PREDICTED: CBL-interacting protein kinase 2-like [Glycine max] gi|356568210|ref|XP_003552306.1| chr1 28636322 28639200 +
4 domain predictions
3 GO terms
Lj1g3v2482360.1
n.a. PREDICTED: probable receptor-like protein kinase At5g15080-like [Cicer arietinum] gi|502104485|ref|XP_004492555.1| chr1 28741106 28745158 +
2 domain predictions
3 GO terms
Lj1g3v2482450.1
n.a. PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At3g28040-like [Glycine max] gi|356530171|ref|XP_003533657.1| chr1 28788792 28793022 -
3 domain predictions
3 GO terms
Lj1g3v2482470.1
n.a. LysM type receptor kinase [Lotus japonicus] gi|290490590|dbj|BAI79282.1| chr1 28801247 28803493 +
2 domain predictions
3 GO terms
Lj1g3v2512570.1
n.a. PREDICTED: serine/threonine-protein kinase HT1-like [Glycine max] gi|356532165|ref|XP_003534644.1| chr1 28907232 28911758 -
3 domain predictions
3 GO terms
Lj1g3v2512570.2
n.a. PREDICTED: serine/threonine-protein kinase HT1-like [Glycine max] gi|356532165|ref|XP_003534644.1| chr1 28907232 28911758 -
3 domain predictions
3 GO terms
Lj1g3v2512720.1
n.a. PREDICTED: probable serine/threonine-protein kinase WNK5 [Glycine max] gi|356566796|ref|XP_003551613.1| chr1 28980445 28986434 +
4 domain predictions
3 GO terms
Lj1g3v2512720.2
n.a. with no lysine kinase 10 [Glycine max] gi|351723577|ref|NP_001236004.1| chr1 28980445 28986434 +
4 domain predictions
3 GO terms
Lj1g3v2533770.1
n.a. FERONIA receptor-like kinase precursor [Glycine max] gi|351726958|ref|NP_001237656.1| chr1 29029722 29034240 +
3 domain predictions
3 GO terms
Lj1g3v2534820.1
n.a. PREDICTED: serine/threonine-protein kinase STN8, chloroplastic-like [Glycine max] gi|356506624|ref|XP_003522077.1| chr1 29056883 29061685 +
4 domain predictions
3 GO terms
Lj1g3v2536060.1
n.a. PREDICTED: probable inactive receptor kinase At5g58300-like [Glycine max] gi|356566806|ref|XP_003551618.1| chr1 29149727 29155785 -
3 domain predictions
3 GO terms
Lj1g3v2536140.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g06840-like isoform 1 [Glycine max] gi|356568252|ref|XP_003552327.1| chr1 29206704 29216049 +
4 domain predictions
3 GO terms
Lj1g3v2556400.1
n.a. Kinase-like protein [Medicago truncatula] gi|357497875|ref|XP_003619226.1| chr1 29409181 29409829 +
2 domain predictions
3 GO terms
Lj1g3v2580580.1
n.a. PREDICTED: serine/threonine-protein kinase At5g01020-like [Glycine max] gi|356532117|ref|XP_003534620.1| chr1 29498855 29502735 +
2 domain predictions
3 GO terms
Lj1g3v2611330.1
n.a. PREDICTED: shaggy-related protein kinase theta-like [Glycine max] gi|356568314|ref|XP_003552357.1| chr1 30157184 30162713 -
4 domain predictions
3 GO terms
Lj1g3v2611530.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330-like [Glycine max] gi|356524497|ref|XP_003530865.1| chr1 30273486 30276880 -
4 domain predictions
3 GO terms
Lj1g3v2612680.1
n.a. PREDICTED: TP53-regulating kinase-like isoform X1 [Cicer arietinum] gi|502129523|ref|XP_004500333.1| chr1 30322942 30328402 -
4 domain predictions
3 GO terms
Lj1g3v2612680.2
n.a. PREDICTED: TP53-regulating kinase-like isoform X1 [Cicer arietinum] gi|502129523|ref|XP_004500333.1| chr1 30322942 30328402 -
3 domain predictions
3 GO terms
Lj1g3v2627670.1
n.a. PREDICTED: serine/threonine-protein kinase RIO1-like [Glycine max] gi|356568362|ref|XP_003552380.1| chr1 30713034 30718538 -
2 domain predictions
3 GO terms
Lj1g3v2628760.1
n.a. PREDICTED: serine/threonine-protein kinase Aurora-3-like [Glycine max] gi|356545969|ref|XP_003541405.1| chr1 30765146 30766888 +
4 domain predictions
3 GO terms
Lj1g3v2634060.1
n.a. PREDICTED: probable serine/threonine-protein kinase At5g41260-like [Cicer arietinum] gi|502105092|ref|XP_004492722.1| chr1 30853233 30861338 +
2 domain predictions
3 GO terms
Lj1g3v2634060.2
n.a. PREDICTED: probable serine/threonine-protein kinase At5g41260-like [Cicer arietinum] gi|502105092|ref|XP_004492722.1| chr1 30853233 30861325 +
2 domain predictions
3 GO terms
Lj1g3v2656170.1
n.a. PREDICTED: probable serine/threonine-protein kinase At5g41260-like [Cicer arietinum] gi|502157222|ref|XP_004510799.1| chr1 30933039 30938860 +
2 domain predictions
3 GO terms
Lj1g3v2661410.1
n.a. Protein kinase; U box [Medicago truncatula] gi|87240964|gb|ABD32822.1| chr1 31094091 31100069 +
4 domain predictions
3 GO terms
Lj1g3v2661410.2
n.a. Protein kinase; U box [Medicago truncatula] gi|87240964|gb|ABD32822.1| chr1 31094340 31100069 +
4 domain predictions
3 GO terms
Lj1g3v2713910.1
n.a. calmodulin-binding receptor-like cytoplasmic kinase [Glycine max] gi|351727172|ref|NP_001235360.1| chr1 31319281 31321167 +
3 domain predictions
3 GO terms
Lj1g3v2742300.1
n.a. MAP kinase 4 [Theobroma cacao] gi|508703991|gb|EOX95887.1| chr1 31546791 31554729 -
4 domain predictions
3 GO terms
Lj1g3v2752350.1
n.a. PREDICTED: probable serine/threonine-protein kinase At1g01540-like [Cicer arietinum] gi|502105347|ref|XP_004492785.1| chr1 31575151 31578960 -
4 domain predictions
3 GO terms
Lj1g3v2752350.2
n.a. PREDICTED: probable serine/threonine-protein kinase At1g01540-like [Cicer arietinum] gi|502105347|ref|XP_004492785.1| chr1 31577253 31581251 -
4 domain predictions
3 GO terms
Lj1g3v2808030.1
n.a. LysM type receptor kinase [Lotus japonicus] gi|290490602|dbj|BAI79288.1| chr1 31839713 31844136 +
4 domain predictions
3 GO terms
Lj1g3v2809520.1
n.a. PREDICTED: probable serine/threonine-protein kinase DDB_G0282963-like isoform X1 [Cicer arietinum] gi|502150836|ref|XP_004508148.1| chr1 32076990 32081128 -
3 domain predictions
3 GO terms
Lj1g3v2809520.2
n.a. PREDICTED: probable serine/threonine-protein kinase DDB_G0282963-like isoform X1 [Cicer arietinum] gi|502150836|ref|XP_004508148.1| chr1 32076990 32081128 -
3 domain predictions
3 GO terms
Lj1g3v2840240.1
n.a. PREDICTED: probable receptor-like protein kinase At5g20050-like [Glycine max] gi|356510540|ref|XP_003523995.1| chr1 32333366 32335078 -
3 domain predictions
3 GO terms
Lj1g3v2883920.1
n.a. PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g48380-like isoform X1 [Cicer arietinum] gi|502106207|ref|XP_004492888.1| chr1 32542899 32545980 -
3 domain predictions
3 GO terms
Lj1g3v2924200.1
n.a. PREDICTED: protein kinase G11A-like [Glycine max] gi|356529977|ref|XP_003533562.1| chr1 32937225 32944268 -
4 domain predictions
3 GO terms
Lj1g3v2942070.1
n.a. PREDICTED: probable receptor-like protein kinase At5g15080-like isoform X1 [Cicer arietinum] gi|502090235|ref|XP_004489164.1| chr1 33415869 33420399 +
2 domain predictions
3 GO terms
Lj1g3v2942070.2
n.a. PREDICTED: probable receptor-like protein kinase At5g15080-like isoform X2 [Cicer arietinum] gi|502090238|ref|XP_004489165.1| chr1 33415869 33420399 +
2 domain predictions
3 GO terms
Lj1g3v2982400.1
n.a. PREDICTED: probable serine/threonine-protein kinase At1g54610-like [Glycine max] gi|356523580|ref|XP_003530415.1| chr1 33995909 34002265 -
4 domain predictions
3 GO terms
Lj1g3v2982400.2
n.a. PREDICTED: probable serine/threonine-protein kinase At1g54610-like isoform X2 [Cicer arietinum] gi|502101718|ref|XP_004491857.1| chr1 33995909 34002265 -
4 domain predictions
3 GO terms
Lj1g3v3018840.1
n.a. PREDICTED: serine/threonine-protein kinase CTR1-like [Glycine max] gi|356551777|ref|XP_003544250.1| chr1 34219167 34226280 +
3 domain predictions
3 GO terms
Lj1g3v3027230.1
n.a. FERONIA receptor-like kinase [Glycine max] gi|351724969|ref|NP_001237588.1| chr1 34673420 34674986 -
4 domain predictions
3 GO terms
Lj1g3v3028240.1
n.a. n.a. chr1 34677334 34678365 +
2 domain predictions
3 GO terms