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Lj1g3v2942070.2

Overview

Field Value
Gene ID Lj1g3v2942070
Transcript ID Lj1g3v2942070.2
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: probable receptor-like protein kinase At5g15080-like isoform X2 [Cicer arietinum] gi|502090238|ref|XP_004489165.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR27001
21 54 34 2.80E-182 –
PANTHER
PTHR27001:SF142
21 54 34 2.80E-182 –
MobiDBLite
mobidb-lite
48 94 47 – –
PANTHER
PTHR27001
88 318 231 2.80E-182 –
PANTHER
PTHR27001:SF142
88 318 231 2.80E-182 –
Gene3D
G3DSA:2.60.120.200
97 134 38 1.60E-07
IPR013320
SUPERFAMILY
SSF56112
107 318 212 2.46E-67
IPR011009
ProSiteProfiles
PS50011
121 318 198 34.365
IPR000719
Pfam
PF07714
125 318 194 2.80E-38
IPR001245
ProSitePatterns
PS00107
127 159 33 –
IPR017441
Gene3D
G3DSA:3.30.200.20
135 196 62 1.50E-23 –
Gene3D
G3DSA:1.10.510.10
197 318 122 3.20E-35 –
ProSitePatterns
PS00108
250 262 13 –
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 15

Expression data

Expression pattern

Expression pattern of Lj1g3v2942070.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v2942070.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.