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| Field | Value |
|---|---|
| Gene ID | Lj1g3v2312950 |
| Transcript ID | Lj1g3v2312950.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Glycine max] gi|356523290|ref|XP_003530273.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 658 | 658 | – | – | |
| PANTHER | 50 | 322 | 273 | 0 | – | |
| PANTHER | 50 | 322 | 273 | 0 | – | |
| Gene3D | 62 | 348 | 287 | 3.20E-58 | ||
| Pfam | 63 | 102 | 40 | 2.90E-11 | ||
| SUPERFAMILY | 110 | 439 | 330 | 3.84E-51 | – | |
| SMART | 129 | 153 | 25 | 350 | ||
| SMART | 225 | 249 | 25 | 150 | ||
| Gene3D | 349 | 633 | 285 | 1.40E-71 | ||
| SUPERFAMILY | 349 | 633 | 285 | 1.29E-61 | ||
| PANTHER | 367 | 967 | 601 | 0 | – | |
| PANTHER | 367 | 967 | 601 | 0 | – | |
| SMART | 401 | 424 | 24 | 97 | ||
| SMART | 425 | 449 | 25 | 52 | ||
| SMART | 522 | 546 | 25 | 47 | ||
| Pfam | 548 | 606 | 59 | 6.60E-07 | ||
| SMART | 594 | 619 | 26 | 100 | ||
| Gene3D | 650 | 722 | 73 | 1.80E-10 | ||
| Phobius | 659 | 683 | 25 | – | – | |
| TMHMM | 661 | 683 | 23 | – | – | |
| Phobius | 684 | 1043 | 360 | – | – | |
| SUPERFAMILY | 691 | 1029 | 339 | 1.89E-63 | ||
| SMART | 713 | 1033 | 321 | 9.70E-24 | ||
| ProSiteProfiles | 713 | 1033 | 321 | 33.644 | ||
| Pfam | 714 | 932 | 219 | 1.90E-39 | ||
| ProSitePatterns | 719 | 742 | 24 | – | ||
| Gene3D | 723 | 794 | 72 | 5.30E-17 | – | |
| Gene3D | 795 | 958 | 164 | 1.00E-33 | – | |
| ProSitePatterns | 844 | 856 | 13 | – | ||
| PANTHER | 998 | 1029 | 32 | 0 | – | |
| PANTHER | 998 | 1029 | 32 | 0 | – | |
| Gene3D | 1003 | 1034 | 32 | 1.00E-33 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj1g3v2312950.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v2312950.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.