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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR000719
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 3339 results. Now displaying 8 of 67 with 50 rows per page. This search has taken 6.195s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0321299.1
n.a. PREDICTED: mitogen-activated protein kinase kinase kinase ANP1-like [Glycine max] gi|356560123|ref|XP_003548345.1| chr0 167745111 167746810 -
4 domain predictions
3 GO terms
Lj0g3v0321389.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130-like [Cicer arietinum] gi|502083045|ref|XP_004487351.1| chr0 167813554 167814424 +
2 domain predictions
3 GO terms
Lj0g3v0321399.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130-like [Glycine max] gi|356543766|ref|XP_003540331.1| chr0 167814386 167814616 +
3 domain predictions
3 GO terms
Lj0g3v0321409.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130-like [Glycine max] gi|356517594|ref|XP_003527472.1| chr0 167814610 167815371 +
3 domain predictions
3 GO terms
Lj0g3v0321429.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130-like [Cicer arietinum] gi|502083045|ref|XP_004487351.1| chr0 167819044 167822055 +
4 domain predictions
3 GO terms
Lj0g3v0321459.1
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|357490335|ref|XP_003615455.1| chr0 167846404 167849163 -
4 domain predictions
3 GO terms
Lj0g3v0321749.1
n.a. PREDICTED: casein kinase I isoform delta-like isoform 2 [Glycine max] gi|356548073|ref|XP_003542428.1| chr0 167964768 167972994 +
3 domain predictions
3 GO terms
Lj0g3v0322119.1
n.a. PREDICTED: probable receptor-like protein kinase At5g39030-like isoform X2 [Cicer arietinum] gi|502123882|ref|XP_004498297.1| chr0 168140019 168144620 +
4 domain predictions
3 GO terms
Lj0g3v0322429.1
n.a. LRR receptor-like serine/threonine-protein kinase HSL2 [Medicago truncatula] gi|357458063|ref|XP_003599312.1| chr0 168406859 168409546 +
4 domain predictions
3 GO terms
Lj0g3v0322829.1
n.a. MAP kinase PsMAPK2 [Pisum sativum] gi|8132347|gb|AAF73257.1|AF154329_1 chr0 168593464 168596583 -
4 domain predictions
3 GO terms
Lj0g3v0322849.1
n.a. PREDICTED: phototropin-1-like [Glycine max] gi|356550222|ref|XP_003543487.1| chr0 168601536 168609765 +
4 domain predictions
3 GO terms
Lj0g3v0322849.2
n.a. PREDICTED: LOW QUALITY PROTEIN: phototropin-1-like, partial [Cucumis sativus] gi|449521880|ref|XP_004167957.1| chr0 168601536 168607986 +
4 domain predictions
3 GO terms
Lj0g3v0323609.2
n.a. PREDICTED: serine/threonine-protein kinase fray2-like isoform X1 [Cicer arietinum] gi|502116589|ref|XP_004495504.1| chr0 169022038 169032661 -
4 domain predictions
3 GO terms
Lj0g3v0323609.4
n.a. PREDICTED: serine/threonine-protein kinase fray2-like isoform X1 [Cicer arietinum] gi|502116589|ref|XP_004495504.1| chr0 169022038 169032661 -
3 domain predictions
3 GO terms
Lj0g3v0324799.1
n.a. PREDICTED: CBL-interacting serine/threonine-protein kinase 11-like [Cicer arietinum] gi|502096347|ref|XP_004490706.1| chr0 169818553 169820571 -
4 domain predictions
3 GO terms
Lj0g3v0325579.1
n.a. Ser/Thr protein kinase [Lotus japonicus] gi|62857020|dbj|BAD95895.1| chr0 170096868 170098199 +
4 domain predictions
3 GO terms
Lj0g3v0325839.3
n.a. PREDICTED: mitogen-activated protein kinase 9-like [Cicer arietinum] gi|502163102|ref|XP_004512727.1| chr0 170293698 170297472 -
4 domain predictions
3 GO terms
Lj0g3v0327459.1
n.a. PREDICTED: mitogen-activated protein kinase kinase kinase 3-like [Vitis vinifera] gi|359486024|ref|XP_003633375.1| chr0 171185802 171186776 +
4 domain predictions
3 GO terms
Lj0g3v0328319.1
n.a. MEK map kinase kinsae [Lotus japonicus] gi|323650793|gb|ADX97443.1| chr0 171626489 171628031 -
4 domain predictions
3 GO terms
Lj0g3v0328619.1
n.a. Ser/Thr protein kinase [Lotus japonicus] gi|62857008|dbj|BAD95889.1| chr0 171773352 171780031 -
4 domain predictions
3 GO terms
Lj0g3v0328619.2
n.a. Ser/Thr protein kinase [Lotus japonicus] gi|62857008|dbj|BAD95889.1| chr0 171773352 171780031 -
4 domain predictions
3 GO terms
Lj0g3v0328979.1
n.a. n.a. chr0 171974264 171979359 +
2 domain predictions
3 GO terms
Lj0g3v0328989.1
n.a. Atypical receptor-like kinase MARK [Medicago truncatula] gi|357521691|ref|XP_003631134.1| chr0 171974641 171976493 -
3 domain predictions
3 GO terms
Lj0g3v0328989.2
n.a. PREDICTED: probable inactive receptor kinase At1g48480-like [Glycine max] gi|356512960|ref|XP_003525182.1| chr0 171974641 171979687 -
3 domain predictions
3 GO terms
Lj0g3v0330589.1
n.a. LysM type receptor kinase [Lotus japonicus] gi|290490572|dbj|BAI79273.1| chr0 172770359 172775285 +
2 domain predictions
3 GO terms
Lj0g3v0331979.1
n.a. Protein kinase-coding resistance protein [Medicago truncatula] gi|357444671|ref|XP_003592613.1| chr0 173690665 173691874 -
2 domain predictions
3 GO terms
Lj0g3v0332859.2
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 25-like [Glycine max] gi|356561745|ref|XP_003549139.1| chr0 174181391 174182543 +
2 domain predictions
3 GO terms
Lj0g3v0332939.1
n.a. Somatic embryogenesis receptor kinase [Medicago truncatula] gi|357458087|ref|XP_003599324.1| chr0 174230908 174233819 +
4 domain predictions
3 GO terms
Lj0g3v0333689.1
n.a. PREDICTED: cyclin-dependent kinase F-4-like isoform X1 [Cicer arietinum] gi|502154002|ref|XP_004509543.1| chr0 174629696 174636409 +
4 domain predictions
3 GO terms
Lj0g3v0333689.2
n.a. PREDICTED: cyclin-dependent kinase F-4-like isoform X1 [Cicer arietinum] gi|502154002|ref|XP_004509543.1| chr0 174629718 174636409 +
4 domain predictions
3 GO terms
Lj0g3v0334209.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g14390-like [Cicer arietinum] gi|502158646|ref|XP_004511229.1| chr0 174915542 174918441 +
2 domain predictions
3 GO terms
Lj0g3v0334209.2
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g14390-like [Cicer arietinum] gi|502158646|ref|XP_004511229.1| chr0 174915542 174918441 +
2 domain predictions
3 GO terms
Lj0g3v0334329.1
n.a. PREDICTED: serine/threonine-protein kinase SRK2E-like [Cicer arietinum] gi|502143007|ref|XP_004505181.1| chr0 174994054 175001124 -
4 domain predictions
3 GO terms
Lj0g3v0335869.1
n.a. PREDICTED: calcium-dependent protein kinase 20-like [Glycine max] gi|356537258|ref|XP_003537146.1| chr0 175978643 175981516 -
4 domain predictions
3 GO terms
Lj0g3v0339599.2
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1-like [Glycine max] gi|356510820|ref|XP_003524132.1| chr0 177914822 177917967 +
3 domain predictions
3 GO terms
Lj0g3v0341059.1
n.a. PREDICTED: CBL-interacting serine/threonine-protein kinase 11-like [Glycine max] gi|356566779|ref|XP_003551605.1| chr0 178670499 178672215 -
4 domain predictions
3 GO terms
Lj0g3v0342649.1
n.a. PREDICTED: protein kinase PINOID-like [Cicer arietinum] gi|502140300|ref|XP_004504155.1| chr0 179648078 179650310 +
4 domain predictions
3 GO terms
Lj0g3v0342799.1
n.a. PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At3g03770-like [Glycine max] gi|356518897|ref|XP_003528113.1| chr0 179721799 179728136 -
2 domain predictions
3 GO terms
Lj0g3v0343819.1
n.a. PREDICTED: leucine-rich repeat receptor-like protein kinase PXL2-like [Glycine max] gi|356536856|ref|XP_003536949.1| chr0 180296303 180299178 +
4 domain predictions
3 GO terms
Lj0g3v0345799.1
n.a. PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like [Cicer arietinum] gi|502125091|ref|XP_004498794.1| chr0 181392792 181394685 -
4 domain predictions
3 GO terms
Lj0g3v0346099.1
n.a. PREDICTED: probable inactive receptor kinase At2g26730-like [Fragaria vesca subsp]. vesca] gi|470101852|ref|XP_004287382.1| chr0 181531041 181534267 +
3 domain predictions
3 GO terms
Lj0g3v0346559.1
n.a. PREDICTED: receptor-like protein kinase THESEUS 1-like [Glycine max] gi|356543264|ref|XP_003540082.1| chr0 181802771 181806732 +
3 domain predictions
3 GO terms
Lj0g3v0346599.1
n.a. Kinase-like protein [Medicago truncatula] gi|357439117|ref|XP_003589835.1| chr0 181818400 181819393 +
3 domain predictions
3 GO terms
Lj0g3v0346649.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840-like isoform X1 [Cicer arietinum] gi|502089237|ref|XP_004488850.1| chr0 181830565 181833176 -
4 domain predictions
3 GO terms
Lj0g3v0348039.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130-like [Glycine max] gi|356517594|ref|XP_003527472.1| chr0 182652330 182655652 +
4 domain predictions
3 GO terms
Lj0g3v0351279.1
n.a. PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g48380-like isoform X1 [Cicer arietinum] gi|502155784|ref|XP_004510191.1| chr0 184699959 184703503 +
2 domain predictions
3 GO terms
Lj0g3v0351729.1
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 10-like [Cicer arietinum] gi|502127648|ref|XP_004499785.1| chr0 184940717 184947979 +
3 domain predictions
3 GO terms
Lj0g3v0351749.1
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 10-like [Cicer arietinum] gi|502127646|ref|XP_004499784.1| chr0 184948753 184953497 -
4 domain predictions
3 GO terms
Lj0g3v0351749.2
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 10-like [Cicer arietinum] gi|502127646|ref|XP_004499784.1| chr0 184950991 184953497 -
3 domain predictions
3 GO terms
Lj0g3v0352869.1
n.a. PREDICTED: CDPK-related protein kinase-like [Glycine max] gi|356520241|ref|XP_003528772.1| chr0 185601768 185607556 +
4 domain predictions
3 GO terms