Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

Lj0g3v0334209.2

Overview

Field Value
Gene ID Lj0g3v0334209
Transcript ID Lj0g3v0334209.2
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g14390-like [Cicer arietinum] gi|502158646|ref|XP_004511229.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 8 8
Phobius 1 27 27
SignalP 1 27 27
TMHMM 5 27 23
Phobius 9 20 12
Phobius 21 27 7
Phobius 28 295 268
SUPERFAMILY 34 243 210 4.48E-27
Gene3D 43 244 202 3.60E-29
PANTHER 113 243 131 2.20E-176
PANTHER 113 243 131 2.20E-176
Gene3D 269 392 124 2.60E-07
PANTHER 289 549 261 2.20E-176
PANTHER 289 549 261 2.20E-176
Phobius 296 323 28
TMHMM 301 323 23
Phobius 324 552 229
SUPERFAMILY 365 540 176 4.91E-28
ProSiteProfiles 385 575 191 15.581
Pfam 389 539 151 1.20E-12
Gene3D 393 471 79 2.50E-08
Gene3D 475 537 63 6.80E-08
TMHMM 553 571 19
Phobius 553 572 20
Phobius 573 575 3

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.

LORE1 insertions 17

Expression data

Expression pattern

Expression pattern of Lj0g3v0334209.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0334209.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.