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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001245
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 1129 results. Now displaying 6 of 23 with 50 rows per page. This search has taken 6.882s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj2g3v1241150.1
n.a. PREDICTED: receptor-like protein kinase 2-like [Glycine max] gi|356502639|ref|XP_003520125.1| chr2 19650481 19655160 -
2 domain predictions
2 GO terms
Lj2g3v1277510.1
n.a. PREDICTED: dual specificity protein kinase pyk1-like [Glycine max] gi|356497930|ref|XP_003517809.1| chr2 20316613 20321609 +
3 domain predictions
2 GO terms
Lj2g3v1277510.2
n.a. PREDICTED: dual specificity protein kinase pyk1-like [Glycine max] gi|356497930|ref|XP_003517809.1| chr2 20319763 20321609 +
2 domain predictions
2 GO terms
Lj2g3v1337460.1
n.a. PREDICTED: LOW QUALITY PROTEIN: protein kinase 2B, chloroplastic-like [Glycine max] gi|356500447|ref|XP_003519043.1| chr2 20925004 20927782 +
2 domain predictions
2 GO terms
Lj2g3v1337460.2
n.a. PREDICTED: LOW QUALITY PROTEIN: protein kinase 2B, chloroplastic-like [Glycine max] gi|356498210|ref|XP_003517946.1| chr2 20926134 20927782 +
2 domain predictions
2 GO terms
Lj2g3v1337660.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g14390-like [Glycine max] gi|356497862|ref|XP_003517775.1| chr2 20993244 20999161 +
2 domain predictions
2 GO terms
Lj2g3v1337660.2
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g14390-like [Glycine max] gi|356497862|ref|XP_003517775.1| chr2 20993244 20996207 +
2 domain predictions
2 GO terms
Lj2g3v1337660.3
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g14390-like [Glycine max] gi|356497862|ref|XP_003517775.1| chr2 20993244 20999336 +
2 domain predictions
2 GO terms
Lj2g3v1338960.1
n.a. PREDICTED: probable receptor-like protein kinase At5g15080-like [Cicer arietinum] gi|502155065|ref|XP_004509947.1| chr2 21073645 21076949 -
2 domain predictions
2 GO terms
Lj2g3v1414850.1
n.a. PREDICTED: proline-rich receptor-like protein kinase PERK13-like [Glycine max] gi|356502022|ref|XP_003519821.1| chr2 22168018 22172400 +
2 domain predictions
2 GO terms
Lj2g3v1415230.1
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 2-like [Glycine max] gi|356497745|ref|XP_003517719.1| chr2 22351595 22361571 -
2 domain predictions
2 GO terms
Lj2g3v1415230.2
n.a. protein kinase family protein [Glycine max] gi|351720648|ref|NP_001235136.1| chr2 22355028 22357386 -
2 domain predictions
2 GO terms
Lj2g3v1455100.1
n.a. U-box domain-containing protein [Medicago truncatula] gi|357485505|ref|XP_003613040.1| chr2 22949180 22956108 -
2 domain predictions
2 GO terms
Lj2g3v1499260.1
n.a. PREDICTED: probable receptor-like protein kinase At5g39030-like isoform X2 [Cicer arietinum] gi|502123882|ref|XP_004498297.1| chr2 23729150 23732999 -
2 domain predictions
2 GO terms
Lj2g3v1550090.1
n.a. serine/threonine-protein kinase At5g01020-like [Glycine max] gi|358248006|ref|NP_001240045.1| chr2 24532460 24535902 +
2 domain predictions
2 GO terms
Lj2g3v1550250.2
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max] gi|356514870|ref|XP_003526125.1| chr2 24633936 24636365 -
2 domain predictions
2 GO terms
Lj2g3v1550330.1
n.a. n.a. chr2 24672572 24677456 +
2 domain predictions
2 GO terms
Lj2g3v1560690.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Glycine max] gi|356546810|ref|XP_003541815.1| chr2 24827633 24829220 +
2 domain predictions
2 GO terms
Lj2g3v1644310.1
n.a. PREDICTED: probable serine/threonine-protein kinase Cx32, chloroplastic-like [Cicer arietinum] gi|502161717|ref|XP_004512261.1| chr2 25498300 25502562 +
2 domain predictions
2 GO terms
Lj2g3v1647790.1
n.a. PREDICTED: serine/threonine-protein kinase CTR1-like [Glycine max] gi|356538347|ref|XP_003537665.1| chr2 25695222 25703753 -
3 domain predictions
2 GO terms
Lj2g3v1649160.1
n.a. PREDICTED: serine/threonine-protein kinase CTR1-like [Glycine max] gi|356538347|ref|XP_003537665.1| chr2 25786409 25797031 +
3 domain predictions
2 GO terms
Lj2g3v1659470.1
n.a. PREDICTED: serine/threonine-protein kinase CTR1-like [Glycine max] gi|356538347|ref|XP_003537665.1| chr2 25842434 25850963 -
3 domain predictions
2 GO terms
Lj2g3v1880860.1
n.a. PREDICTED: probable serine/threonine-protein kinase At1g01540-like [Cicer arietinum] gi|502160833|ref|XP_004511920.1| chr2 28059018 28062031 -
2 domain predictions
2 GO terms
Lj2g3v1902230.1
n.a. PREDICTED: probable receptor-like protein kinase At5g24010-like [Glycine max] gi|356575998|ref|XP_003556122.1| chr2 28215800 28218259 -
2 domain predictions
2 GO terms
Lj2g3v2002570.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357481915|ref|XP_003611243.1| chr2 30362464 30365880 +
2 domain predictions
2 GO terms
Lj2g3v2017330.1
n.a. Tyrosine-protein kinase Lyn [Medicago truncatula] gi|357481705|ref|XP_003611138.1| chr2 30796686 30803457 +
3 domain predictions
2 GO terms
Lj2g3v2017580.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g63430-like [Glycine max] gi|356497232|ref|XP_003517466.1| chr2 30907858 30911940 +
2 domain predictions
2 GO terms
Lj2g3v2017580.2
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g63430-like [Glycine max] gi|356497232|ref|XP_003517466.1| chr2 30908167 30911940 +
2 domain predictions
2 GO terms
Lj2g3v2088000.1
n.a. PREDICTED: serine/threonine-protein kinase dst1-like [Cicer arietinum] gi|502159782|ref|XP_004511529.1| chr2 31423415 31427289 +
2 domain predictions
2 GO terms
Lj2g3v2150660.1
n.a. PREDICTED: proline-rich receptor-like protein kinase PERK13-like [Glycine max] gi|356541036|ref|XP_003538989.1| chr2 32475224 32475587 +
2 domain predictions
2 GO terms
Lj2g3v2196570.1
n.a. PREDICTED: probable L-type lectin-domain containing receptor kinase S.7-like [Glycine max] gi|356551830|ref|XP_003544276.1| chr2 32830957 32833849 -
2 domain predictions
2 GO terms
Lj2g3v2196580.1
n.a. PREDICTED: probable L-type lectin-domain containing receptor kinase S.7-like [Glycine max] gi|356551830|ref|XP_003544276.1| chr2 32831163 32834338 -
2 domain predictions
2 GO terms
Lj2g3v2222900.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like protein kinase At4g00330-like [Glycine max] gi|356551844|ref|XP_003544283.1| chr2 32972361 32978963 -
2 domain predictions
2 GO terms
Lj2g3v2315190.1
n.a. PREDICTED: mitogen-activated protein kinase kinase kinase 10-like [Glycine max] gi|356553098|ref|XP_003544895.1| chr2 33623110 33628080 -
3 domain predictions
2 GO terms
Lj2g3v2508990.1
n.a. LysM type receptor kinase [Lotus japonicus] gi|290490584|dbj|BAI79279.1| chr2 34886355 34887219 -
2 domain predictions
2 GO terms
Lj2g3v2584480.1
n.a. PREDICTED: protein kinase APK1A, chloroplastic-like [Glycine max] gi|356551743|ref|XP_003544233.1| chr2 35426082 35429682 +
2 domain predictions
2 GO terms
Lj2g3v2647240.1
n.a. protein kinase-related protein precursor [Glycine max] gi|351725755|ref|NP_001235056.1| chr2 35732033 35733442 +
2 domain predictions
2 GO terms
Lj2g3v2794510.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase MRH1-like [Glycine max] gi|356551399|ref|XP_003544063.1| chr2 36774910 36779183 -
2 domain predictions
2 GO terms
Lj2g3v2794510.2
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase MRH1-like [Glycine max] gi|356551399|ref|XP_003544063.1| chr2 36774910 36779278 -
2 domain predictions
2 GO terms
Lj2g3v2843040.1
n.a. PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase IMK2-like [Cicer arietinum] gi|502097475|ref|XP_004491002.1| chr2 36979496 36982698 -
2 domain predictions
2 GO terms
Lj2g3v2878340.1
n.a. PREDICTED: serine/threonine-protein kinase HT1-like [Glycine max] gi|356520095|ref|XP_003528701.1| chr2 37456210 37458020 -
3 domain predictions
2 GO terms
Lj2g3v2904710.2
n.a. Nod-factor receptor 1a [Lotus japonicus] gi|37651058|emb|CAE02589.1| chr2 37918453 37922998 +
2 domain predictions
2 GO terms
Lj2g3v2904710.3
n.a. Nod-factor receptor 1b [Lotus japonicus] gi|37651060|emb|CAE02590.1| chr2 37918453 37922998 +
2 domain predictions
2 GO terms
Lj2g3v2974830.1
n.a. Receptor-like protein kinase BRI1-like protein [Medicago truncatula] gi|357493593|ref|XP_003617085.1| chr2 38454278 38456403 -
2 domain predictions
2 GO terms
Lj2g3v2984880.1
n.a. PREDICTED: probable inactive receptor kinase At5g10020-like [Glycine max] gi|356499271|ref|XP_003518465.1| chr2 38477835 38483383 +
2 domain predictions
2 GO terms
Lj2g3v2984880.2
n.a. PREDICTED: probable inactive receptor kinase At5g10020-like [Glycine max] gi|356499271|ref|XP_003518465.1| chr2 38478010 38485134 +
2 domain predictions
2 GO terms
Lj2g3v3109860.1
n.a. PREDICTED: serine/threonine-protein kinase TNNI3K-like [Cicer arietinum] gi|502098928|ref|XP_004491350.1| chr2 40197761 40203192 -
2 domain predictions
2 GO terms
Lj2g3v3109860.2
n.a. PREDICTED: serine/threonine-protein kinase TNNI3K-like [Cicer arietinum] gi|502098928|ref|XP_004491350.1| chr2 40198464 40203192 -
2 domain predictions
2 GO terms
Lj2g3v3121060.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g07650-like [Glycine max] gi|356501491|ref|XP_003519558.1| chr2 40299793 40311354 +
2 domain predictions
2 GO terms
Lj2g3v3234660.1
n.a. MAP kinase-like protein [Medicago truncatula] gi|357494805|ref|XP_003617691.1| chr2 41470313 41470490 -
2 domain predictions
2 GO terms