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Lj2g3v1241150.1

Overview

Field Value
Gene ID Lj2g3v1241150
Transcript ID Lj2g3v1241150.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: receptor-like protein kinase 2-like [Glycine max] gi|356502639|ref|XP_003520125.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 37 37
Phobius 1 18 18
PANTHER 4 98 95 0
PANTHER 4 98 95 0
Phobius 19 30 12
Phobius 31 37 7
Phobius 38 733 696
Pfam 43 85 43 1.10E-04
Gene3D 56 254 199 6.80E-48
SUPERFAMILY 117 462 346 2.75E-64
PANTHER 123 226 104 0
PANTHER 123 226 104 0
ProSiteProfiles 137 159 23 4.963
SMART 159 183 25 14
SMART 159 182 24 45
ProSiteProfiles 161 183 23 6.649
ProSiteProfiles 185 207 23 4.886
ProSiteProfiles 234 256 23 4.632
Gene3D 255 460 206 9.60E-52
SMART 256 280 25 200
PANTHER 258 572 315 0
PANTHER 258 572 315 0
ProSiteProfiles 282 305 24 4.924
SMART 304 336 33 140
SMART 304 328 25 42
ProSiteProfiles 330 353 24 5.309
SUPERFAMILY 368 699 332 3.92E-64
ProSiteProfiles 378 401 24 4.77
SMART 424 448 25 29
ProSiteProfiles 426 448 23 6.926
ProSiteProfiles 450 472 23 5.225
Pfam 450 509 60 3.30E-09
Gene3D 461 703 243 7.10E-60
ProSiteProfiles 474 497 24 5.325
SMART 496 520 25 28
SMART 496 511 16 300
ProSiteProfiles 498 520 23 6.087
SMART 520 546 27 320
ProSiteProfiles 522 545 24 4.532
SMART 544 567 24 140
ProSiteProfiles 546 569 24 4.986
SMART 568 592 25 160
ProSiteProfiles 570 592 23 4.793
SMART 592 613 22 680
SMART 593 616 24 230
ProSiteProfiles 594 616 23 6.896
PRINTS 595 608 14 6.90E-06
PANTHER 597 1072 476 0
PANTHER 597 1072 476 0
ProSiteProfiles 618 641 24 4.555
Pfam 623 677 55 1.30E-06
SMART 641 666 26 120
SMART 641 660 20 360
PRINTS 641 654 14 6.90E-06
ProSiteProfiles 643 665 23 7.843
SMART 664 689 26 70
ProSiteProfiles 666 687 22 5.81
Phobius 734 755 22
TMHMM 736 755 20
Phobius 756 1136 381
SUPERFAMILY 771 1073 303 5.13E-71
ProSiteProfiles 793 1080 288 36.527
SMART 793 1076 284 5.10E-28
Pfam 797 1071 275 9.00E-41
Gene3D 799 867 69 8.00E-18
ProSitePatterns 799 822 24
Gene3D 868 1074 207 3.60E-41
ProSitePatterns 925 937 13

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.

LORE1 insertions 18

Expression data

Expression pattern

Expression pattern of Lj2g3v1241150.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v1241150.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.