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Lj2g3v1338960.1

Overview

Field Value
Gene ID Lj2g3v1338960
Transcript ID Lj2g3v1338960.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: probable receptor-like protein kinase At5g15080-like [Cicer arietinum] gi|502155065|ref|XP_004509947.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR27001:SF40
11 39 29 3.90E-202 –
PANTHER
PTHR27001
11 39 29 3.90E-202 –
MobiDBLite
mobidb-lite
57 104 48 – –
Gene3D
G3DSA:2.60.120.200
99 144 46 8.70E-07
IPR013320
PANTHER
PTHR27001
107 338 232 3.90E-202 –
PANTHER
PTHR27001:SF40
107 338 232 3.90E-202 –
SUPERFAMILY
SSF56112
117 338 222 1.12E-72
IPR011009
ProSiteProfiles
PS50011
131 338 208 37.234
IPR000719
Pfam
PF07714
136 336 201 1.90E-43
IPR001245
ProSitePatterns
PS00107
137 169 33 –
IPR017441
Gene3D
G3DSA:3.30.200.20
145 203 59 2.60E-23 –
Gene3D
G3DSA:1.10.510.10
204 338 135 4.60E-41 –
ProSitePatterns
PS00108
260 272 13 –
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 11

Expression data

Expression pattern

Expression pattern of Lj2g3v1338960.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v1338960.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.