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Lj2g3v2794510.1

Overview

Field Value
Gene ID Lj2g3v2794510
Transcript ID Lj2g3v2794510.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: probable LRR receptor-like serine/threonine-protein kinase MRH1-like [Glycine max] gi|356551399|ref|XP_003544063.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 29 29
Phobius 1 9 9
Phobius 10 24 15
TMHMM 10 32 23
PANTHER 14 184 171 0
PANTHER 14 184 171 0
Phobius 25 29 5
Phobius 30 313 284
SUPERFAMILY 32 188 157 5.83E-23
Pfam 33 75 43 6.80E-10
Gene3D 33 187 155 1.50E-28
MobiDBLite 213 308 96
PANTHER 237 253 17 0
PANTHER 237 253 17 0
PANTHER 273 669 397 0
PANTHER 273 669 397 0
Gene3D 287 390 104 1.80E-04
TMHMM 314 336 23
Phobius 314 337 24
Phobius 338 669 332
SUPERFAMILY 365 638 274 3.99E-43
ProSiteProfiles 377 641 265 20.697
Pfam 379 638 260 2.90E-25
Gene3D 391 447 57 2.60E-13
Gene3D 448 637 190 1.90E-23

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.

Expression data

Expression pattern

Expression pattern of Lj2g3v2794510.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v2794510.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.