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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001611
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 861 results. Now displaying 2 of 18 with 50 rows per page. This search has taken 5.747s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0203199.1
n.a. Receptor protein kinase-like protein [Medicago truncatula] gi|357439013|ref|XP_003589783.1| chr0 100705047 100707368 +
4 domain predictions
1 GO term
Lj0g3v0205729.1
n.a. Leucine-rich repeat-containing protein [Medicago truncatula] gi|357489671|ref|XP_003615123.1| chr0 102342302 102346014 -
4 domain predictions
1 GO term
Lj0g3v0205949.1
n.a. PREDICTED: probable receptor protein kinase TMK1-like [Glycine max] gi|356569387|ref|XP_003552883.1| chr0 102542288 102543508 +
2 domain predictions
1 GO term
Lj0g3v0207049.1
n.a. Leucine-rich repeat-containing protein [Medicago truncatula] gi|357489671|ref|XP_003615123.1| chr0 103324473 103327843 +
2 domain predictions
1 GO term
Lj0g3v0208289.1
n.a. PREDICTED: F-box/LRR-repeat protein 3-like [Cicer arietinum] gi|502147553|ref|XP_004506828.1| chr0 104304981 104310831 +
2 domain predictions
1 GO term
Lj0g3v0208289.2
n.a. PREDICTED: F-box/LRR-repeat protein 3-like [Glycine max] gi|356506506|ref|XP_003522022.1| chr0 104304981 104310831 +
2 domain predictions
1 GO term
Lj0g3v0210819.2
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357488299|ref|XP_003614437.1| chr0 106051733 106061397 -
3 domain predictions
1 GO term
Lj0g3v0217609.1
n.a. NBS resistance protein [Medicago truncatula] gi|357456371|ref|XP_003598466.1| chr0 110753999 110758886 -
2 domain predictions
1 GO term
Lj0g3v0220159.1
n.a. PREDICTED: phytosulfokine receptor 2-like [Glycine max] gi|356546862|ref|XP_003541841.1| chr0 112635233 112639990 -
2 domain predictions
1 GO term
Lj0g3v0220169.1
n.a. PREDICTED: phytosulfokine receptor 2-like [Glycine max] gi|356546862|ref|XP_003541841.1| chr0 112635481 112639990 -
3 domain predictions
1 GO term
Lj0g3v0233449.1
n.a. n.a. chr0 120875579 120883284 -
2 domain predictions
1 GO term
Lj0g3v0233459.1
n.a. NBS resistance protein [Medicago truncatula] gi|357506453|ref|XP_003623515.1| chr0 120875579 120882710 +
2 domain predictions
1 GO term
Lj0g3v0234639.1
n.a. n.a. chr0 121572291 121573262 +
2 domain predictions
1 GO term
Lj0g3v0235609.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2-like [Glycine max] gi|356561480|ref|XP_003549009.1| chr0 122105042 122106846 -
2 domain predictions
1 GO term
Lj0g3v0241409.1
n.a. PREDICTED: leucine-rich repeat extensin-like protein 3-like [Cicer arietinum] gi|502144046|ref|XP_004505561.1| chr0 125217622 125220207 -
2 domain predictions
1 GO term
Lj0g3v0243349.1
n.a. PREDICTED: protein NSP-INTERACTING KINASE 3-like [Glycine max] gi|356497611|ref|XP_003517653.1| chr0 126210556 126215918 -
2 domain predictions
1 GO term
Lj0g3v0244309.1
n.a. PREDICTED: receptor-like protein kinase HSL1-like [Glycine max] gi|356515144|ref|XP_003526261.1| chr0 126783691 126786749 +
3 domain predictions
1 GO term
Lj0g3v0244319.1
n.a. HAESA-like 1 isoform 2 [Theobroma cacao] gi|508707636|gb|EOX99532.1| chr0 126783691 126785998 +
3 domain predictions
1 GO term
Lj0g3v0247179.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710-like [Cicer arietinum] gi|502148812|ref|XP_004507279.1| chr0 128097658 128101088 -
4 domain predictions
1 GO term
Lj0g3v0247199.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710-like [Cicer arietinum] gi|502148812|ref|XP_004507279.1| chr0 128104974 128106812 -
3 domain predictions
1 GO term
Lj0g3v0247209.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710-like [Cicer arietinum] gi|502148812|ref|XP_004507279.1| chr0 128106771 128107410 -
2 domain predictions
1 GO term
Lj0g3v0250789.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357436695|ref|XP_003588623.1| chr0 130005562 130006239 -
2 domain predictions
1 GO term
Lj0g3v0252099.1
n.a. PREDICTED: leucine-rich repeat-containing protein 40-like [Glycine max] gi|356549743|ref|XP_003543250.1| chr0 130695794 130709063 +
3 domain predictions
1 GO term
Lj0g3v0252099.2
n.a. PREDICTED: leucine-rich repeat-containing protein 40-like [Glycine max] gi|356549743|ref|XP_003543250.1| chr0 130698952 130709063 +
3 domain predictions
1 GO term
Lj0g3v0252649.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356545122|ref|XP_003540994.1| chr0 131052396 131060830 +
3 domain predictions
1 GO term
Lj0g3v0255579.1
n.a. tyrosine-sulfated glycopeptide receptor 1-like precursor [Glycine max] gi|358248614|ref|NP_001239911.1| chr0 132766656 132768871 +
2 domain predictions
1 GO term
Lj0g3v0266899.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like protein kinase At2g33170-like [Cicer arietinum] gi|502166974|ref|XP_004514026.1| chr0 138286275 138293398 +
2 domain predictions
1 GO term
Lj0g3v0268889.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g37250-like [Cicer arietinum] gi|502152807|ref|XP_004509103.1| chr0 139301442 139305142 -
2 domain predictions
1 GO term
Lj0g3v0268899.1
n.a. n.a. chr0 139303435 139305142 +
2 domain predictions
1 GO term
Lj0g3v0268989.1
n.a. PREDICTED: U2 small nuclear ribonucleoprotein A'-like isoform X1 [Cicer arietinum] gi|502090322|ref|XP_004489191.1| chr0 139364330 139368682 -
2 domain predictions
1 GO term
Lj0g3v0269759.1
n.a. Disease resistance protein [Medicago truncatula] gi|357499833|ref|XP_003620205.1| chr0 139743325 139744902 -
2 domain predictions
1 GO term
Lj0g3v0270309.1
n.a. Receptor-like kinase [Medicago truncatula] gi|357515415|ref|XP_003627996.1| chr0 140061819 140065622 -
3 domain predictions
1 GO term
Lj0g3v0271049.1
n.a. Receptor protein kinase-like protein [Medicago truncatula] gi|357462393|ref|XP_003601478.1| chr0 140382825 140387367 +
2 domain predictions
1 GO term
Lj0g3v0276029.2
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g29180-like isoform X1 [Cicer arietinum] gi|502164205|ref|XP_004513081.1| chr0 143146225 143151476 -
2 domain predictions
1 GO term
Lj0g3v0278349.1
n.a. probable leucine-rich repeat receptor-like protein kinase At1g35710-like precursor [Glycine max] gi|359807163|ref|NP_001241099.1| chr0 144542642 144544812 -
4 domain predictions
1 GO term
Lj0g3v0282649.1
n.a. n.a. chr0 146542871 146545973 -
3 domain predictions
1 GO term
Lj0g3v0286449.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g51880-like [Glycine max] gi|356556621|ref|XP_003546622.1| chr0 148819423 148823480 -
2 domain predictions
1 GO term
Lj0g3v0288609.1
n.a. PREDICTED: U2 small nuclear ribonucleoprotein A'-like isoform X1 [Cicer arietinum] gi|502090322|ref|XP_004489191.1| chr0 149932992 149936282 -
2 domain predictions
1 GO term
Lj0g3v0291029.3
n.a. Receptor like protein 33 [Theobroma cacao] gi|508725116|gb|EOY17013.1| chr0 151083660 151090180 +
3 domain predictions
1 GO term
Lj0g3v0291039.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2-like [Cicer arietinum] gi|502078346|ref|XP_004485915.1| chr0 151090772 151094021 +
3 domain predictions
1 GO term
Lj0g3v0293469.1
n.a. PREDICTED: receptor-like protein 12-like [Glycine max] gi|356566707|ref|XP_003551571.1| chr0 152328916 152329875 -
2 domain predictions
1 GO term
Lj0g3v0296659.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710-like [Cicer arietinum] gi|502148812|ref|XP_004507279.1| chr0 154114009 154118296 -
4 domain predictions
1 GO term
Lj0g3v0297189.1
n.a. PREDICTED: receptor-like protein kinase HSL1-like [Glycine max] gi|356515144|ref|XP_003526261.1| chr0 154416084 154419775 +
3 domain predictions
1 GO term
Lj0g3v0303549.1
n.a. Receptor protein kinase-like protein [Medicago truncatula] gi|357516993|ref|XP_003628785.1| chr0 158016672 158020224 -
2 domain predictions
1 GO term
Lj0g3v0304789.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2-like [Glycine max] gi|356561456|ref|XP_003548997.1| chr0 158780159 158781199 +
4 domain predictions
1 GO term
Lj0g3v0304799.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1-like [Glycine max] gi|356561584|ref|XP_003549061.1| chr0 158781480 158783322 +
2 domain predictions
1 GO term
Lj0g3v0306109.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357439017|ref|XP_003589785.1| chr0 159627112 159629719 -
4 domain predictions
1 GO term
Lj0g3v0306119.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850-like [Glycine max] gi|356568066|ref|XP_003552234.1| chr0 159629854 159630617 -
3 domain predictions
1 GO term
Lj0g3v0308309.1
n.a. PREDICTED: probable inactive receptor kinase At4g23740-like [Glycine max] gi|356551470|ref|XP_003544098.1| chr0 160978563 160981283 -
2 domain predictions
1 GO term
Lj0g3v0308459.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1-like [Cicer arietinum] gi|502165747|ref|XP_004513677.1| chr0 161062734 161064162 -
2 domain predictions
1 GO term