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Lj0g3v0233449.1

Overview

Field Value
Gene ID Lj0g3v0233449
Transcript ID Lj0g3v0233449.1
Lotus japonicus genome version MG20 v3.0
Description
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
CDD 2 119 118 1.46E-12
PANTHER 3 757 755 8.80E-276
PANTHER 3 757 755 8.80E-276
Coils 31 51 21
SUPERFAMILY 139 417 279 5.34E-65
Gene3D 154 336 183 4.80E-14
Pfam 155 444 290 2.60E-67
PRINTS 178 193 16 1.10E-17
PRINTS 251 265 15 1.10E-17
PRINTS 355 369 15 1.10E-17
SUPERFAMILY 481 673 193 8.67E-31
Gene3D 543 698 156 8.60E-10
SUPERFAMILY 705 855 151 8.67E-31
Gene3D 731 987 257 8.70E-26
SUPERFAMILY 808 993 186 1.56E-22
PRINTS 812 828 17 1.10E-17
Pfam 908 964 57 4.60E-07
PANTHER 929 979 51 8.80E-276
PANTHER 929 979 51 8.80E-276

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Molecular function ADP binding Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate.

Expression data

Expression pattern

Expression pattern of Lj0g3v0233449.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0233449.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.