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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR011009
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 3629 results. Now displaying 11 of 73 with 50 rows per page. This search has taken 6.282s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v1060470.1
n.a. Kinase-like protein [Medicago truncatula] gi|357464125|ref|XP_003602344.1| chr1 13106600 13110033 +
2 domain predictions
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Lj1g3v1113880.1
n.a. PREDICTED: probable inactive receptor kinase At5g58300-like isoform X1 [Cicer arietinum] gi|502136730|ref|XP_004502808.1| chr1 13953318 13969716 +
2 domain predictions
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Lj1g3v1147540.1
n.a. PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At3g28040-like [Glycine max] gi|356507516|ref|XP_003522510.1| chr1 14216302 14220498 +
2 domain predictions
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Lj1g3v1207840.1
n.a. PREDICTED: probable inactive receptor kinase At5g10020-like isoform X2 [Cicer arietinum] gi|502136842|ref|XP_004502858.1| chr1 14743901 14744464 -
2 domain predictions
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Lj1g3v1207870.1
n.a. PREDICTED: probable inactive receptor kinase At5g10020-like isoform X1 [Cicer arietinum] gi|502136840|ref|XP_004502857.1| chr1 14753957 14759281 -
2 domain predictions
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Lj1g3v1222370.1
n.a. PREDICTED: brassinosteroid LRR receptor kinase-like [Cicer arietinum] gi|502136882|ref|XP_004502878.1| chr1 14923173 14927479 -
2 domain predictions
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Lj1g3v1222380.1
n.a. Brassinosteroid receptor [Medicago truncatula] gi|357464445|ref|XP_003602504.1| chr1 14923489 14927479 -
2 domain predictions
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Lj1g3v1289070.1
n.a. PREDICTED: serine/threonine-protein kinase ULK3-like [Glycine max] gi|356508997|ref|XP_003523239.1| chr1 15303086 15304560 +
2 domain predictions
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Lj1g3v1289070.2
n.a. Serine/threonine protein kinase GE16371 [Medicago truncatula] gi|357464547|ref|XP_003602555.1| chr1 15303086 15306898 +
2 domain predictions
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Lj1g3v1289070.3
n.a. Serine/threonine protein kinase GE16371 [Medicago truncatula] gi|357464547|ref|XP_003602555.1| chr1 15303086 15306361 +
2 domain predictions
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Lj1g3v1289070.4
n.a. PREDICTED: serine/threonine-protein kinase ULK3-like [Glycine max] gi|356508997|ref|XP_003523239.1| chr1 15304631 15306361 +
2 domain predictions
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Lj1g3v1290400.1
n.a. Protein kinase [Medicago truncatula] gi|357519861|ref|XP_003630219.1| chr1 15415291 15417944 -
2 domain predictions
 –
Lj1g3v1304780.2
n.a. PREDICTED: phosphatidylinositol 4-kinase beta 1-like isoform X3 [Cicer arietinum] gi|502137006|ref|XP_004502930.1| chr1 15710544 15722508 +
2 domain predictions
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Lj1g3v1304780.3
n.a. PREDICTED: phosphatidylinositol 4-kinase beta 1-like isoform X3 [Cicer arietinum] gi|502137006|ref|XP_004502930.1| chr1 15711238 15722508 +
2 domain predictions
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Lj1g3v1316910.1
n.a. PREDICTED: mitogen-activated protein kinase kinase kinase kinase 3-like [Glycine max] gi|356516360|ref|XP_003526863.1| chr1 15806880 15811880 +
2 domain predictions
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Lj1g3v1316910.2
n.a. PREDICTED: mitogen-activated protein kinase kinase kinase kinase 3-like [Glycine max] gi|356516360|ref|XP_003526863.1| chr1 15808782 15811880 +
2 domain predictions
 –
Lj1g3v1318170.1
n.a. PREDICTED: phosphatidylinositol 4-kinase beta 1-like [Glycine max] gi|356525675|ref|XP_003531449.1| chr1 15936860 15943176 +
2 domain predictions
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Lj1g3v1318180.1
n.a. PREDICTED: phosphatidylinositol 4-kinase beta 1-like [Fragaria vesca subsp]. vesca] gi|470103820|ref|XP_004288325.1| chr1 15942707 15944267 +
2 domain predictions
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Lj1g3v1318210.1
n.a. mitogen-activated kinase kinase kinase alpha [Lotus japonicus] gi|45476486|dbj|BAD12492.1| chr1 15971154 15975694 +
2 domain predictions
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Lj1g3v1318220.1
n.a. mitogen-activated kinase kinase kinase alpha [Lotus japonicus] gi|45476486|dbj|BAD12492.1| chr1 15971169 15975707 +
2 domain predictions
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Lj1g3v1384140.1
n.a. Kinase superfamily protein isoform 1 [Theobroma cacao] gi|508702204|gb|EOX94100.1| chr1 16813125 16816511 -
2 domain predictions
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Lj1g3v1384140.2
n.a. Kinase superfamily protein isoform 2 [Theobroma cacao] gi|508702205|gb|EOX94101.1| chr1 16813125 16818439 -
2 domain predictions
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Lj1g3v1386390.1
n.a. PREDICTED: calcium-dependent protein kinase SK5-like [Cicer arietinum] gi|502137246|ref|XP_004503020.1| chr1 16894656 16899064 +
2 domain predictions
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Lj1g3v1454030.1
n.a. PREDICTED: dual specificity protein phosphatase PHS1-like [Cicer arietinum] gi|502133383|ref|XP_004501744.1| chr1 17440626 17448475 -
2 domain predictions
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Lj1g3v1465210.1
n.a. PREDICTED: probable serine/threonine-protein kinase At1g54610-like [Glycine max] gi|356516507|ref|XP_003526935.1| chr1 17540974 17545296 -
2 domain predictions
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Lj1g3v1486340.1
n.a. Protein kinase [Medicago truncatula] gi|87240901|gb|ABD32759.1| chr1 17811517 17811977 +
2 domain predictions
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Lj1g3v1526260.1
n.a. PREDICTED: serine/threonine-protein kinase PEPKR2-like [Glycine max] gi|356510139|ref|XP_003523797.1| chr1 18261218 18266391 +
2 domain predictions
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Lj1g3v1548770.1
n.a. PREDICTED: serine/threonine-protein kinase CTR1-like [Glycine max] gi|356510128|ref|XP_003523792.1| chr1 18519088 18526640 +
2 domain predictions
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Lj1g3v1548770.2
n.a. PREDICTED: serine/threonine-protein kinase CTR1-like [Glycine max] gi|356510128|ref|XP_003523792.1| chr1 18519313 18526640 +
2 domain predictions
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Lj1g3v1561390.1
n.a. PREDICTED: serine/threonine-protein kinase-like protein At1g28390-like [Cicer arietinum] gi|502133011|ref|XP_004501618.1| chr1 18890584 18892957 -
2 domain predictions
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Lj1g3v1604230.1
n.a. PREDICTED: wall-associated receptor kinase-like 14-like [Cicer arietinum] gi|502131637|ref|XP_004501050.1| chr1 19241765 19245185 +
2 domain predictions
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Lj1g3v1663400.1
n.a. PREDICTED: serine/threonine-protein kinase TOUSLED-like [Glycine max] gi|356499255|ref|XP_003518457.1| chr1 19878574 19889817 -
2 domain predictions
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Lj1g3v1686670.1
n.a. Disease resistance protein [Medicago truncatula] gi|357465601|ref|XP_003603085.1| chr1 19998154 20002147 -
2 domain predictions
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Lj1g3v1687840.1
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|357465633|ref|XP_003603101.1| chr1 20084740 20087792 -
2 domain predictions
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Lj1g3v1787540.1
n.a. PREDICTED: U-box domain-containing protein 35-like isoform X2 [Cicer arietinum] gi|502132630|ref|XP_004501455.1| chr1 21159801 21165042 -
2 domain predictions
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Lj1g3v1787560.1
n.a. PREDICTED: serine/threonine-protein kinase CBK1-like [Glycine max] gi|356507026|ref|XP_003522272.1| chr1 21172496 21183878 +
2 domain predictions
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Lj1g3v1788350.1
n.a. PREDICTED: serine/threonine-protein kinase At5g01020-like [Glycine max] gi|356518179|ref|XP_003527759.1| chr1 21467368 21469840 +
2 domain predictions
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Lj1g3v1788350.2
n.a. Kinase-like protein [Medicago truncatula] gi|357465893|ref|XP_003603231.1| chr1 21467390 21470638 +
2 domain predictions
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Lj1g3v1788350.3
n.a. Kinase-like protein [Medicago truncatula] gi|357465893|ref|XP_003603231.1| chr1 21467577 21469840 +
2 domain predictions
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Lj1g3v1810070.1
n.a. Kinase superfamily protein isoform 1 [Theobroma cacao] gi|508782014|gb|EOY29270.1| chr1 21872153 21879542 -
2 domain predictions
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Lj1g3v1810070.2
n.a. protein kinase superfamily protein [Arabidopsis thaliana] gi|30689682|ref|NP_197879.2| chr1 21873387 21879542 -
2 domain predictions
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Lj1g3v1815350.1
n.a. PREDICTED: mitogen-activated protein kinase kinase kinase ANP1-like [Glycine max] gi|356571111|ref|XP_003553724.1| chr1 22025885 22026310 +
2 domain predictions
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Lj1g3v1841230.1
n.a. PREDICTED: probable receptor-like protein kinase At1g80640-like [Glycine max] gi|356518228|ref|XP_003527781.1| chr1 22384652 22388097 -
2 domain predictions
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Lj1g3v1841230.3
n.a. PREDICTED: probable receptor-like protein kinase At1g80640-like [Glycine max] gi|356518228|ref|XP_003527781.1| chr1 22386803 22388001 -
2 domain predictions
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Lj1g3v1901610.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5-like [Glycine max] gi|356518250|ref|XP_003527792.1| chr1 22627313 22630556 +
2 domain predictions
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Lj1g3v1911780.1
n.a. Kinase-like protein [Medicago truncatula] gi|357484477|ref|XP_003612526.1| chr1 22706045 22709873 +
2 domain predictions
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Lj1g3v1991590.1
n.a. PREDICTED: U-box domain-containing protein 34-like [Cicer arietinum] gi|502132091|ref|XP_004501223.1| chr1 23447682 23452281 +
2 domain predictions
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Lj1g3v1991630.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357519095|ref|XP_003629836.1| chr1 23470386 23474214 -
2 domain predictions
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Lj1g3v2023010.1
n.a. S-locus lectin protein kinase family protein isoform 1 [Theobroma cacao] gi|508721005|gb|EOY12902.1| chr1 23742959 23745766 +
2 domain predictions
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Lj1g3v2033030.1
n.a. S-locus lectin protein kinase family protein isoform 2, partial [Theobroma cacao] gi|508721006|gb|EOY12903.1| chr1 23753092 23756677 +
2 domain predictions
 –