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| Field | Value |
|---|---|
| Gene ID | Lj1g3v2023010 |
| Transcript ID | Lj1g3v2023010.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | S-locus lectin protein kinase family protein isoform 1 [Theobroma cacao] gi|508721005|gb|EOY12902.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 26 | 26 | – | – | |
| Phobius | 1 | 26 | 26 | – | – | |
| Phobius | 1 | 10 | 10 | – | – | |
| Phobius | 11 | 22 | 12 | – | – | |
| Phobius | 23 | 26 | 4 | – | – | |
| Phobius | 27 | 181 | 155 | – | – | |
| Gene3D | 36 | 101 | 66 | 0.001 | – | |
| PANTHER | 38 | 562 | 525 | 5.90E-280 | – | |
| PANTHER | 38 | 562 | 525 | 5.90E-280 | – | |
| CDD | 89 | 163 | 75 | 1.96E-15 | – | |
| ProSiteProfiles | 91 | 165 | 75 | 10.015 | ||
| Pfam | 91 | 151 | 61 | 2.50E-13 | ||
| SMART | 92 | 164 | 73 | 2.10E-08 | ||
| Gene3D | 166 | 263 | 98 | 5.00E-11 | ||
| Phobius | 182 | 205 | 24 | – | – | |
| TMHMM | 183 | 205 | 23 | – | – | |
| Phobius | 206 | 562 | 357 | – | – | |
| SUPERFAMILY | 234 | 537 | 304 | 1.75E-81 | ||
| SMART | 250 | 522 | 273 | 9.60E-30 | ||
| ProSiteProfiles | 250 | 533 | 284 | 38.181 | ||
| Pfam | 252 | 520 | 269 | 4.10E-49 | ||
| CDD | 256 | 522 | 267 | 1.76E-90 | – | |
| Gene3D | 264 | 312 | 49 | 4.50E-28 | – | |
| Gene3D | 313 | 517 | 205 | 9.00E-43 | – | |
| ProSitePatterns | 371 | 383 | 13 | – | ||
| MobiDBLite | 542 | 562 | 21 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj1g3v2023010.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v2023010.1, powered by CORGI.
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