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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR011009
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 3629 results. Now displaying 73 of 73 with 50 rows per page. This search has taken 5.626s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi6g1v0343400.1
n.a. Serine/threonine-protein kinase; TAIR: AT4G21380.1 receptor kinase 3; Swiss-Prot: sp|O81905|SD18_ARATH Receptor-like serine/threonine-protein kinase SD1-8; TrEMBL-Plants: tr|G7IK51|G7IK51_MEDTR Serine/threonine-protein kinase; Found in the gene: LotjaGi6g1v0343400 LjG1.1_chr6 65629502 65636792 -
2 domain predictions
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LotjaGi6g1v0343500.1
n.a. Serine/threonine-protein kinase; TAIR: AT4G27290.2 S-locus lectin protein kinase family protein; Swiss-Prot: sp|O81905|SD18_ARATH Receptor-like serine/threonine-protein kinase SD1-8; TrEMBL-Plants: tr|A0A151S126|A0A151S126_CAJCA Serine/threonine-protein kinase; Found in the gene: LotjaGi6g1v0343500 LjG1.1_chr6 65637993 65642011 +
2 domain predictions
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LotjaGi6g1v0343500.2
n.a. Protein kinase; TAIR: AT1G65790.1 receptor kinase 1; Swiss-Prot: sp|Q39086|SD17_ARATH Receptor-like serine/threonine-protein kinase SD1-7; TrEMBL-Plants: tr|K7M1S0|K7M1S0_SOYBN Serine/threonine-protein kinase; Found in the gene: LotjaGi6g1v0343500 LjG1.1_chr6 65640078 65641984 +
2 domain predictions
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LotjaGi6g1v0348800.1
n.a. Receptor-like kinase; TAIR: AT5G58300.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|Q9LVM0|Y5830_ARATH Probable inactive receptor kinase At5g58300; TrEMBL-Plants: tr|A0A0B2R180|A0A0B2R180_GLYSO Putative inactive receptor kinase; Found in the gene: LotjaGi6g1v0348800 LjG1.1_chr6 66154031 66156950 +
2 domain predictions
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LotjaGi6g1v0352100.2
n.a. Disease resistance protein; TAIR: AT4G27190.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q9T048|DRL27_ARATH Disease resistance protein At4g27190; TrEMBL-Plants: tr|V7BKF5|V7BKF5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0352100 LjG1.1_chr6 66425868 66431993 -
2 domain predictions
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LotjaGi6g1v0354800.1
n.a. Receptor-like kinase; TAIR: AT4G33430.1 BRI1-associated receptor kinase; Swiss-Prot: sp|Q94F62|BAK1_ARATH BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1; TrEMBL-Plants: tr|A0A151UHV4|A0A151UHV4_CAJCA BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1; Found in the gene: LotjaGi6g1v0354800 LjG1.1_chr6 66659626 66666182 -
2 domain predictions
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LotjaGi6g1v0354800.2
n.a. Receptor-like kinase; TAIR: AT4G33430.1 BRI1-associated receptor kinase; Swiss-Prot: sp|Q94F62|BAK1_ARATH BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1; TrEMBL-Plants: tr|A0A151UHV4|A0A151UHV4_CAJCA BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1; Found in the gene: LotjaGi6g1v0354800 LjG1.1_chr6 66660113 66664741 -
2 domain predictions
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LotjaGi6g1v0354800.3
n.a. Receptor-like kinase; TAIR: AT4G33430.1 BRI1-associated receptor kinase; Swiss-Prot: sp|Q94F62|BAK1_ARATH BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1; TrEMBL-Plants: tr|A0A151UHV4|A0A151UHV4_CAJCA BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1; Found in the gene: LotjaGi6g1v0354800 LjG1.1_chr6 66660113 66664755 -
2 domain predictions
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LotjaGi6g1v0354800.4
n.a. Receptor-like kinase; TAIR: AT4G33430.1 BRI1-associated receptor kinase; Swiss-Prot: sp|Q94F62|BAK1_ARATH BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1; TrEMBL-Plants: tr|A0A151UHV4|A0A151UHV4_CAJCA BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1; Found in the gene: LotjaGi6g1v0354800 LjG1.1_chr6 66660113 66665860 -
2 domain predictions
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LotjaGi6g1v0354800.5
n.a. Receptor-like kinase; TAIR: AT4G33430.1 BRI1-associated receptor kinase; Swiss-Prot: sp|Q94F62|BAK1_ARATH BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1; TrEMBL-Plants: tr|A0A151UHV4|A0A151UHV4_CAJCA BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1; Found in the gene: LotjaGi6g1v0354800 LjG1.1_chr6 66660113 66665860 -
2 domain predictions
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LotjaGi6g1v0354800.6
n.a. Receptor-like kinase; TAIR: AT4G33430.1 BRI1-associated receptor kinase; Swiss-Prot: sp|Q94F62|BAK1_ARATH BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1; TrEMBL-Plants: tr|A0A151UHV4|A0A151UHV4_CAJCA BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1; Found in the gene: LotjaGi6g1v0354800 LjG1.1_chr6 66660113 66665861 -
2 domain predictions
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LotjaGi6g1v0357600.1
n.a. Protein kinase; TAIR: AT4G08500.1 MAPK/ERK kinase kinase 1; Swiss-Prot: sp|Q39008|M3K1_ARATH Mitogen-activated protein kinase kinase kinase 1; TrEMBL-Plants: tr|I1MDR4|I1MDR4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0357600 LjG1.1_chr6 66932293 66936633 +
2 domain predictions
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LotjaGi6g1v0360500.1
n.a. Receptor-like kinase; TAIR: AT1G11050.1 Protein kinase superfamily protein; Swiss-Prot: sp|O04086|Y1105_ARATH Probable receptor-like protein kinase At1g11050; TrEMBL-Plants: tr|A0A0S3S1R0|A0A0S3S1R0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0360500 LjG1.1_chr6 67204698 67263474 -
2 domain predictions
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LotjaGi6g1v0360500.4
n.a. Receptor-like kinase; TAIR: AT1G11050.1 Protein kinase superfamily protein; Swiss-Prot: sp|O04086|Y1105_ARATH Probable receptor-like protein kinase At1g11050; TrEMBL-Plants: tr|A0A0S3S1R0|A0A0S3S1R0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0360500 LjG1.1_chr6 67256433 67263474 -
2 domain predictions
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LotjaGi6g1v0360500.5
n.a. Receptor-like kinase; TAIR: AT1G11050.1 Protein kinase superfamily protein; Swiss-Prot: sp|O04086|Y1105_ARATH Probable receptor-like protein kinase At1g11050; TrEMBL-Plants: tr|A0A0S3S1R0|A0A0S3S1R0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0360500 LjG1.1_chr6 67259135 67263285 -
2 domain predictions
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LotjaGi6g1v0360500.6
n.a. Receptor-like kinase; TAIR: AT1G11050.1 Protein kinase superfamily protein; Swiss-Prot: sp|O04086|Y1105_ARATH Probable receptor-like protein kinase At1g11050; TrEMBL-Plants: tr|A0A0S3S1R0|A0A0S3S1R0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0360500 LjG1.1_chr6 67260955 67262903 -
2 domain predictions
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LotjaGi6g1v0360500.7
n.a. Receptor-like kinase; TAIR: AT1G11050.1 Protein kinase superfamily protein; Swiss-Prot: sp|O04086|Y1105_ARATH Probable receptor-like protein kinase At1g11050; TrEMBL-Plants: tr|A0A0S3S1R0|A0A0S3S1R0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0360500 LjG1.1_chr6 67260972 67262909 -
2 domain predictions
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LotjaGi6g1v0362000.1
n.a. Kinase family protein; TAIR: AT1G60940.1 SNF1-related protein kinase 2.10; Swiss-Prot: sp|Q9C958|SRK2B_ARATH Serine/threonine-protein kinase SRK2B; TrEMBL-Plants: tr|I3SRU6|I3SRU6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0362000 LjG1.1_chr6 67401126 67404215 -
2 domain predictions
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LotjaGi6g1v0362000.2
n.a. Kinase family protein; TAIR: AT1G60940.1 SNF1-related protein kinase 2.10; Swiss-Prot: sp|Q9C958|SRK2B_ARATH Serine/threonine-protein kinase SRK2B; TrEMBL-Plants: tr|I3SRU6|I3SRU6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0362000 LjG1.1_chr6 67401721 67403507 -
2 domain predictions
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LotjaGi6g1v0364300.1
n.a. Non-specific serine/threonine protein kinase; TAIR: AT4G20270.1 Leucine-rich receptor-like protein kinase family protein; Swiss-Prot: sp|O65440|BAME3_ARATH Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3; TrEMBL-Plants: tr|G7IN89|G7IN89_MEDTR Non-specific serine/threonine protein kinase; Found in the gene: LotjaGi6g1v0364300 LjG1.1_chr6 67561538 67569929 -
2 domain predictions
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LotjaGi6g1v0364300.2
n.a. Non-specific serine/threonine protein kinase; TAIR: AT4G20270.1 Leucine-rich receptor-like protein kinase family protein; Swiss-Prot: sp|O65440|BAME3_ARATH Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3; TrEMBL-Plants: tr|G7IN89|G7IN89_MEDTR Non-specific serine/threonine protein kinase; Found in the gene: LotjaGi6g1v0364300 LjG1.1_chr6 67561636 67569929 -
2 domain predictions
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LotjaGi6g1v0364300.3
n.a. Non-specific serine/threonine protein kinase; TAIR: AT4G20270.1 Leucine-rich receptor-like protein kinase family protein; Swiss-Prot: sp|O65440|BAME3_ARATH Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3; TrEMBL-Plants: tr|G7IN89|G7IN89_MEDTR Non-specific serine/threonine protein kinase; Found in the gene: LotjaGi6g1v0364300 LjG1.1_chr6 67561926 67566308 -
2 domain predictions
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LotjaGi6g1v0364700.5
n.a. Protein kinase; TAIR: AT1G09840.1 shaggy-like protein kinase 41; Swiss-Prot: sp|Q39019|KSG10_ARATH Shaggy-related protein kinase kappa; TrEMBL-Plants: tr|V4T0F2|V4T0F2_9ROSI Uncharacterized protein; Found in the gene: LotjaGi6g1v0364700 LjG1.1_chr6 67676415 67683893 -
2 domain predictions
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LotjaGi6g1v0364700.6
n.a. Protein kinase; TAIR: AT1G09840.1 shaggy-like protein kinase 41; Swiss-Prot: sp|Q39019|KSG10_ARATH Shaggy-related protein kinase kappa; TrEMBL-Plants: tr|Q1SL21|Q1SL21_MEDTR Protein kinase; Found in the gene: LotjaGi6g1v0364700 LjG1.1_chr6 67676823 67682992 -
2 domain predictions
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LotjaGi6g1v0364700.7
n.a. Protein kinase; TAIR: AT1G09840.1 shaggy-like protein kinase 41; Swiss-Prot: sp|Q39019|KSG10_ARATH Shaggy-related protein kinase kappa; TrEMBL-Plants: tr|Q1SL21|Q1SL21_MEDTR Protein kinase; Found in the gene: LotjaGi6g1v0364700 LjG1.1_chr6 67676823 67682992 -
2 domain predictions
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LotjaGi6g1v0364700.8
n.a. Protein kinase; TAIR: AT1G09840.1 shaggy-like protein kinase 41; Swiss-Prot: sp|Q39019|KSG10_ARATH Shaggy-related protein kinase kappa; TrEMBL-Plants: tr|I1LTB4|I1LTB4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0364700 LjG1.1_chr6 67677434 67682432 -
2 domain predictions
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LotjaGi6g1v0365600.1
n.a. Protein kinase-like; TAIR: AT1G09600.1 Protein kinase superfamily protein; Swiss-Prot: sp|F4I114|Y1960_ARATH Probable serine/threonine-protein kinase At1g09600; TrEMBL-Plants: tr|A0A0R0HGJ5|A0A0R0HGJ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0365600 LjG1.1_chr6 67791721 67797816 -
2 domain predictions
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LotjaGi6g1v0365600.2
n.a. Protein kinase superfamily protein; TAIR: AT1G09600.1 Protein kinase superfamily protein; Swiss-Prot: sp|F4I114|Y1960_ARATH Probable serine/threonine-protein kinase At1g09600; TrEMBL-Plants: tr|K7LVB0|K7LVB0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0365600 LjG1.1_chr6 67792108 67797828 -
2 domain predictions
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LotjaGi6g1v0365800.1
n.a. Protein kinase-like; TAIR: AT1G07150.1 mitogen-activated protein kinase kinase kinase 13; Swiss-Prot: sp|Q54R82|MKKA_DICDI Mitogen-activated protein kinase kinase kinase A; TrEMBL-Plants: tr|A0A1J7FU42|A0A1J7FU42_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0365800 LjG1.1_chr6 67822155 67865597 +
2 domain predictions
 –