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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR013320
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 826 results. Now displaying 4 of 17 with 50 rows per page. This search has taken 5.665s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0304899.1
n.a. Ser/Thr protein kinase [Lotus japonicus] gi|62867357|dbj|BAD95981.1| chr0 158840582 158843744 -
2 domain predictions
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Lj0g3v0304959.1
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 25-like [Glycine max] gi|356559907|ref|XP_003548237.1| chr0 158883519 158887347 -
2 domain predictions
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Lj0g3v0306109.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357439017|ref|XP_003589785.1| chr0 159627112 159629719 -
2 domain predictions
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Lj0g3v0307059.1
n.a. PREDICTED: proline-rich receptor-like protein kinase PERK8-like [Glycine max] gi|356524022|ref|XP_003530632.1| chr0 160288512 160290364 +
2 domain predictions
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Lj0g3v0308999.1
n.a. PREDICTED: tyrosine-protein kinase Lck-like [Glycine max] gi|356526029|ref|XP_003531622.1| chr0 161371987 161375877 -
2 domain predictions
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Lj0g3v0309109.2
n.a. Serine/threonine protein kinase [Medicago truncatula] gi|357452493|ref|XP_003596523.1| chr0 161458536 161460340 +
2 domain predictions
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Lj0g3v0310539.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g24230-like [Glycine max] gi|356510976|ref|XP_003524208.1| chr0 162205293 162208324 -
2 domain predictions
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Lj0g3v0310929.1
n.a. n.a. chr0 162403467 162406443 +
3 domain predictions
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Lj0g3v0310949.1
n.a. PREDICTED: L-type lectin-domain containing receptor kinase S.4-like [Glycine max] gi|356496074|ref|XP_003516895.1| chr0 162403467 162406700 -
3 domain predictions
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Lj0g3v0312539.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g67720-like [Cicer arietinum] gi|502135453|ref|XP_004502339.1| chr0 163172056 163178144 +
2 domain predictions
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Lj0g3v0314389.1
n.a. PREDICTED: wall-associated receptor kinase 5-like [Glycine max] gi|356551203|ref|XP_003543967.1| chr0 164071491 164104945 +
2 domain predictions
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Lj0g3v0314509.1
n.a. PREDICTED: probable receptor-like protein kinase At1g67000-like [Glycine max] gi|356574206|ref|XP_003555242.1| chr0 164154056 164154894 +
2 domain predictions
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Lj0g3v0316299.1
n.a. PREDICTED: xyloglucan endotransglucosylase/hydrolase protein 2-like [Cicer arietinum] gi|502178692|ref|XP_004516314.1| chr0 165158734 165159305 +
3 domain predictions
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Lj0g3v0316319.1
n.a. PREDICTED: probable serine/threonine-protein kinase RLCKVII-like [Glycine max] gi|356557471|ref|XP_003547039.1| chr0 165174997 165178501 +
2 domain predictions
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Lj0g3v0321389.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130-like [Cicer arietinum] gi|502083045|ref|XP_004487351.1| chr0 167813554 167814424 +
2 domain predictions
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Lj0g3v0321429.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130-like [Cicer arietinum] gi|502083045|ref|XP_004487351.1| chr0 167819044 167822055 +
2 domain predictions
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Lj0g3v0321459.1
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|357490335|ref|XP_003615455.1| chr0 167846404 167849163 -
2 domain predictions
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Lj0g3v0322119.1
n.a. PREDICTED: probable receptor-like protein kinase At5g39030-like isoform X2 [Cicer arietinum] gi|502123882|ref|XP_004498297.1| chr0 168140019 168144620 +
2 domain predictions
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Lj0g3v0322429.1
n.a. LRR receptor-like serine/threonine-protein kinase HSL2 [Medicago truncatula] gi|357458063|ref|XP_003599312.1| chr0 168406859 168409546 +
2 domain predictions
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Lj0g3v0330669.1
n.a. somatic embryogenesis receptor kinase-like protein 3 [Medicago truncatula] gi|308154500|gb|ADO15297.1| chr0 172824652 172830231 +
2 domain predictions
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Lj0g3v0332709.1
n.a. PREDICTED: probable receptor protein kinase TMK1-like [Glycine max] gi|356569387|ref|XP_003552883.1| chr0 174114063 174116111 -
2 domain predictions
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Lj0g3v0332859.2
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 25-like [Glycine max] gi|356561745|ref|XP_003549139.1| chr0 174181391 174182543 +
2 domain predictions
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Lj0g3v0332939.1
n.a. Somatic embryogenesis receptor kinase [Medicago truncatula] gi|357458087|ref|XP_003599324.1| chr0 174230908 174233819 +
2 domain predictions
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Lj0g3v0333759.1
n.a. PREDICTED: L-type lectin-domain containing receptor kinase I.7-like [Cicer arietinum] gi|502146881|ref|XP_004506648.1| chr0 174694932 174696653 -
3 domain predictions
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Lj0g3v0333769.1
n.a. PREDICTED: L-type lectin-domain containing receptor kinase I.7-like [Cicer arietinum] gi|502146881|ref|XP_004506648.1| chr0 174695234 174696653 -
3 domain predictions
 –
Lj0g3v0334189.1
n.a. PREDICTED: L-type lectin-domain containing receptor kinase S.1-like [Glycine max] gi|356562682|ref|XP_003549598.1| chr0 174899927 174900268 -
3 domain predictions
 –
Lj0g3v0334209.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g14390-like [Cicer arietinum] gi|502158646|ref|XP_004511229.1| chr0 174915542 174918441 +
2 domain predictions
 –
Lj0g3v0334209.2
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g14390-like [Cicer arietinum] gi|502158646|ref|XP_004511229.1| chr0 174915542 174918441 +
2 domain predictions
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Lj0g3v0342799.1
n.a. PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At3g03770-like [Glycine max] gi|356518897|ref|XP_003528113.1| chr0 179721799 179728136 -
2 domain predictions
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Lj0g3v0345799.1
n.a. PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like [Cicer arietinum] gi|502125091|ref|XP_004498794.1| chr0 181392792 181394685 -
3 domain predictions
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Lj0g3v0346099.1
n.a. PREDICTED: probable inactive receptor kinase At2g26730-like [Fragaria vesca subsp]. vesca] gi|470101852|ref|XP_004287382.1| chr0 181531041 181534267 +
2 domain predictions
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Lj0g3v0346559.1
n.a. PREDICTED: receptor-like protein kinase THESEUS 1-like [Glycine max] gi|356543264|ref|XP_003540082.1| chr0 181802771 181806732 +
2 domain predictions
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Lj0g3v0346649.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840-like isoform X1 [Cicer arietinum] gi|502089237|ref|XP_004488850.1| chr0 181830565 181833176 -
2 domain predictions
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Lj0g3v0347579.1
n.a. PREDICTED: agglutinin-2-like [Cicer arietinum] gi|502162703|ref|XP_004512588.1| chr0 182380178 182380498 +
3 domain predictions
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Lj0g3v0348039.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130-like [Glycine max] gi|356517594|ref|XP_003527472.1| chr0 182652330 182655652 +
2 domain predictions
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Lj0g3v0351279.1
n.a. PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g48380-like isoform X1 [Cicer arietinum] gi|502155784|ref|XP_004510191.1| chr0 184699959 184703503 +
2 domain predictions
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Lj0g3v0351729.1
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 10-like [Cicer arietinum] gi|502127648|ref|XP_004499785.1| chr0 184940717 184947979 +
2 domain predictions
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Lj0g3v0351749.1
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 10-like [Cicer arietinum] gi|502127646|ref|XP_004499784.1| chr0 184948753 184953497 -
2 domain predictions
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Lj0g3v0351749.2
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 10-like [Cicer arietinum] gi|502127646|ref|XP_004499784.1| chr0 184950991 184953497 -
2 domain predictions
 –
Lj0g3v0356809.1
n.a. PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase IMK2-like [Glycine max] gi|356495063|ref|XP_003516400.1| chr0 187910217 187913635 -
2 domain predictions
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Lj0g3v0356899.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Cicer arietinum] gi|502084183|ref|XP_004487641.1| chr0 187938143 187941462 -
2 domain predictions
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Lj0g3v0358399.1
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|357453577|ref|XP_003597066.1| chr0 188648804 188654509 -
2 domain predictions
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Lj0g3v0359679.1
n.a. PREDICTED: serine/threonine-protein kinase BRI1-like 1-like [Cicer arietinum] gi|502127369|ref|XP_004499678.1| chr0 189379633 189384247 +
2 domain predictions
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Lj0g3v0364369.1
n.a. protein kinase-related protein precursor [Glycine max] gi|351725755|ref|NP_001235056.1| chr0 192264519 192268730 -
2 domain predictions
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Lj1g3v0052330.1
n.a. cysteine-rich protein precursor [Glycine max] gi|351721533|ref|NP_001238492.1| chr1 448340 451345 -
2 domain predictions
 –
Lj1g3v0052350.1
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|357480737|ref|XP_003610654.1| chr1 454027 457186 -
2 domain predictions
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Lj1g3v0052360.1
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|357480739|ref|XP_003610655.1| chr1 459111 462277 -
2 domain predictions
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Lj1g3v0177810.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410-like, partial [Vitis vinifera] gi|359497026|ref|XP_003635401.1| chr1 2016830 2021310 +
2 domain predictions
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Lj1g3v0268780.1
n.a. protein kinase family protein [Glycine max] gi|351727927|ref|NP_001238713.1| chr1 3052098 3056106 -
2 domain predictions
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Lj1g3v0526480.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g74360-like [Glycine max] gi|356519088|ref|XP_003528206.1| chr1 6611600 6615007 +
2 domain predictions
 –