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| Field | Value |
|---|---|
| Gene ID | Lj1g3v0526480 |
| Transcript ID | Lj1g3v0526480.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g74360-like [Glycine max] gi|356519088|ref|XP_003528206.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 551 | 551 | – | – | |
| SUPERFAMILY | 2 | 316 | 315 | 1.45E-55 | ||
| Gene3D | 4 | 174 | 171 | 1.20E-39 | ||
| PANTHER | 4 | 50 | 47 | 0 | – | |
| PANTHER | 4 | 50 | 47 | 0 | – | |
| Pfam | 26 | 41 | 16 | 0.64 | ||
| PANTHER | 73 | 168 | 96 | 0 | – | |
| PANTHER | 73 | 168 | 96 | 0 | – | |
| SMART | 120 | 144 | 25 | 180 | ||
| Gene3D | 175 | 313 | 139 | 2.10E-39 | ||
| PANTHER | 184 | 312 | 129 | 0 | – | |
| PANTHER | 184 | 312 | 129 | 0 | – | |
| SMART | 193 | 217 | 25 | 18 | ||
| SMART | 265 | 289 | 25 | 14 | ||
| PANTHER | 389 | 894 | 506 | 0 | – | |
| PANTHER | 389 | 894 | 506 | 0 | – | |
| Gene3D | 396 | 505 | 110 | 1.70E-25 | ||
| SUPERFAMILY | 396 | 505 | 110 | 3.83E-20 | ||
| SMART | 460 | 484 | 25 | 390 | ||
| Gene3D | 525 | 641 | 117 | 1.10E-09 | ||
| TMHMM | 550 | 572 | 23 | – | – | |
| Phobius | 552 | 572 | 21 | – | – | |
| Phobius | 573 | 911 | 339 | – | – | |
| MobiDBLite | 579 | 599 | 21 | – | – | |
| SUPERFAMILY | 608 | 895 | 288 | 4.45E-74 | ||
| Pfam | 628 | 891 | 264 | 1.70E-44 | ||
| ProSiteProfiles | 628 | 897 | 270 | 38.04 | ||
| SMART | 628 | 896 | 269 | 2.50E-36 | ||
| ProSitePatterns | 634 | 657 | 24 | – | ||
| CDD | 634 | 897 | 264 | 8.51E-84 | – | |
| Gene3D | 642 | 696 | 55 | 6.90E-21 | – | |
| Gene3D | 697 | 894 | 198 | 8.40E-41 | – | |
| ProSitePatterns | 750 | 762 | 13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj1g3v0526480.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v0526480.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.