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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0310539 |
| Transcript ID | Lj0g3v0310539.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g24230-like [Glycine max] gi|356510976|ref|XP_003524208.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 19 | 19 | – | – | |
| SignalP | 1 | 24 | 24 | – | – | |
| SignalP | 1 | 19 | 19 | – | – | |
| Phobius | 1 | 3 | 3 | – | – | |
| SignalP | 1 | 24 | 24 | – | – | |
| Phobius | 4 | 14 | 11 | – | – | |
| Phobius | 15 | 19 | 5 | – | – | |
| Phobius | 20 | 285 | 266 | – | – | |
| PANTHER | 53 | 326 | 274 | 2.50E-185 | – | |
| Gene3D | 53 | 250 | 198 | 2.90E-37 | ||
| PANTHER | 53 | 326 | 274 | 2.50E-185 | – | |
| SUPERFAMILY | 53 | 242 | 190 | 8.50E-34 | ||
| Pfam | 57 | 117 | 61 | 7.50E-08 | ||
| SMART | 80 | 103 | 24 | 17 | ||
| ProSiteProfiles | 82 | 104 | 23 | 6.534 | ||
| ProSiteProfiles | 132 | 153 | 22 | 5.925 | ||
| Pfam | 132 | 188 | 57 | 1.50E-09 | ||
| SMART | 152 | 174 | 23 | 0.15 | ||
| ProSiteProfiles | 154 | 176 | 23 | 7.566 | ||
| PRINTS | 155 | 168 | 14 | 3.60E-05 | – | |
| ProSiteProfiles | 177 | 199 | 23 | 6.688 | ||
| SMART | 198 | 221 | 24 | 65 | ||
| PRINTS | 198 | 211 | 14 | 3.60E-05 | – | |
| ProSiteProfiles | 200 | 223 | 24 | 6.026 | ||
| ProSiteProfiles | 224 | 245 | 22 | 5.34 | ||
| Gene3D | 265 | 403 | 139 | 3.10E-07 | ||
| Phobius | 286 | 310 | 25 | – | – | |
| TMHMM | 286 | 308 | 23 | – | – | |
| Phobius | 311 | 519 | 209 | – | – | |
| PANTHER | 345 | 480 | 136 | 2.50E-185 | – | |
| PANTHER | 345 | 480 | 136 | 2.50E-185 | – | |
| SUPERFAMILY | 363 | 478 | 116 | 8.74E-16 | ||
| Pfam | 392 | 495 | 104 | 1.10E-07 | ||
| Gene3D | 404 | 463 | 60 | 2.90E-09 | – | |
| PANTHER | 500 | 519 | 20 | 2.50E-185 | – | |
| PANTHER | 500 | 519 | 20 | 2.50E-185 | – | |
| SUPERFAMILY | 503 | 519 | 17 | 8.74E-16 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj0g3v0310539.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0310539.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.