Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR013320
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 826 results. Now displaying 6 of 17 with 50 rows per page. This search has taken 5.494s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v3028260.1
n.a. serine-threonine kinase [Phaseolus vulgaris] gi|38194928|gb|AAR13316.1| chr1 34678537 34679418 -
2 domain predictions
 –
Lj1g3v3029340.1
n.a. serine-threonine kinase [Glycine max] gi|351723221|ref|NP_001238551.1| chr1 34705054 34706961 -
2 domain predictions
 –
Lj1g3v3051570.1
n.a. PREDICTED: receptor-like protein kinase ANXUR2-like [Glycine max] gi|356526520|ref|XP_003531865.1| chr1 34757645 34758935 +
2 domain predictions
 –
Lj1g3v3051580.1
n.a. PREDICTED: receptor-like protein kinase ANXUR2-like [Glycine max] gi|356526520|ref|XP_003531865.1| chr1 34757646 34759412 +
2 domain predictions
 –
Lj1g3v3051590.1
n.a. PREDICTED: receptor-like protein kinase ANXUR2-like [Glycine max] gi|356526520|ref|XP_003531865.1| chr1 34761012 34762929 -
2 domain predictions
 –
Lj1g3v3064030.1
n.a. PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 23-like [Fragaria vesca subsp]. vesca] gi|470114331|ref|XP_004293369.1| chr1 34954813 34955115 +
3 domain predictions
 –
Lj1g3v3103680.1
n.a. PREDICTED: protein NSP-INTERACTING KINASE 1-like [Glycine max] gi|356526591|ref|XP_003531900.1| chr1 35221423 35225912 -
2 domain predictions
 –
Lj1g3v3103680.2
n.a. PREDICTED: protein NSP-INTERACTING KINASE 1-like [Glycine max] gi|356526591|ref|XP_003531900.1| chr1 35223426 35225517 -
2 domain predictions
 –
Lj1g3v3289930.1
n.a. Ser/Thr protein kinase [Lotus japonicus] gi|62857020|dbj|BAD95895.1| chr1 36899075 36901209 +
2 domain predictions
 –
Lj1g3v3289950.1
n.a. Ser/Thr protein kinase [Lotus japonicus] gi|62857020|dbj|BAD95895.1| chr1 36905900 36907027 +
2 domain predictions
 –
Lj1g3v3289980.2
n.a. Ser/Thr protein kinase [Lotus japonicus] gi|62857020|dbj|BAD95895.1| chr1 36918725 36925909 +
2 domain predictions
 –
Lj1g3v3331690.1
n.a. PREDICTED: proline-rich receptor-like protein kinase PERK8-like isoform X1 [Cicer arietinum] gi|502144970|ref|XP_004505816.1| chr1 38205204 38213895 +
2 domain predictions
 –
Lj1g3v3331690.2
n.a. PREDICTED: proline-rich receptor-like protein kinase PERK8-like isoform X1 [Cicer arietinum] gi|502144970|ref|XP_004505816.1| chr1 38205204 38213895 +
2 domain predictions
 –
Lj1g3v3406620.1
n.a. PREDICTED: proline-rich receptor-like protein kinase PERK5-like [Glycine max] gi|356509567|ref|XP_003523519.1| chr1 39365769 39369323 +
2 domain predictions
 –
Lj1g3v3407720.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g16250-like [Glycine max] gi|356509565|ref|XP_003523518.1| chr1 39408986 39415403 -
2 domain predictions
 –
Lj1g3v3417740.1
n.a. PREDICTED: L-type lectin-domain containing receptor kinase VIII.2-like [Glycine max] gi|356568030|ref|XP_003552217.1| chr1 39427781 39429645 +
3 domain predictions
 –
Lj1g3v3443850.1
n.a. PREDICTED: wall-associated receptor kinase-like 20-like [Glycine max] gi|356520931|ref|XP_003529113.1| chr1 39851325 39857020 -
2 domain predictions
 –
Lj1g3v3446440.1
n.a. PREDICTED: probable serine/threonine-protein kinase NAK-like isoform X1 [Cicer arietinum] gi|502103754|ref|XP_004492356.1| chr1 40016556 40020152 +
2 domain predictions
 –
Lj1g3v3559210.1
n.a. PREDICTED: probable receptor-like protein kinase At5g47070-like [Glycine max] gi|356522988|ref|XP_003530124.1| chr1 40930772 40936501 -
2 domain predictions
 –
Lj1g3v3608350.1
n.a. n.a. chr1 41538245 41543168 +
2 domain predictions
 –
Lj1g3v3645340.1
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 42-like [Glycine max] gi|356573847|ref|XP_003555067.1| chr1 42048452 42052230 +
2 domain predictions
 –
Lj1g3v3767170.1
n.a. PREDICTED: wall-associated receptor kinase 5-like [Glycine max] gi|356551203|ref|XP_003543967.1| chr1 43241329 43244541 +
2 domain predictions
 –
Lj1g3v3767250.1
n.a. PREDICTED: wall-associated receptor kinase 5-like [Glycine max] gi|356551203|ref|XP_003543967.1| chr1 43277544 43280530 +
2 domain predictions
 –
Lj1g3v3834120.1
n.a. PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At3g03770-like [Glycine max] gi|356570123|ref|XP_003553240.1| chr1 43589171 43594271 +
2 domain predictions
 –
Lj1g3v3834250.1
n.a. LysM type receptor kinase [Lotus japonicus] gi|290490586|dbj|BAI79280.1| chr1 43650968 43653558 -
2 domain predictions
 –
Lj1g3v3891980.1
n.a. PREDICTED: serine/threonine-protein kinase PBS1-like isoform X2 [Cicer arietinum] gi|502106624|ref|XP_004493001.1| chr1 44708819 44714472 +
2 domain predictions
 –
Lj1g3v3917790.2
n.a. PREDICTED: probable receptor-like protein kinase At1g30570-like [Glycine max] gi|356571643|ref|XP_003553985.1| chr1 45633690 45639297 -
2 domain predictions
 –
Lj1g3v3943560.1
n.a. PREDICTED: LOW QUALITY PROTEIN: probable xyloglucan endotransglucosylase/hydrolase protein B-like [Glycine max] gi|356571655|ref|XP_003553991.1| chr1 45965733 45985781 +
3 domain predictions
 –
Lj1g3v3943560.3
n.a. Xyloglucan endotransglucosylase [Medicago truncatula] gi|357508521|ref|XP_003624549.1| chr1 45984447 45985781 +
3 domain predictions
 –
Lj1g3v3974820.1
n.a. PREDICTED: probable receptor-like protein kinase At1g67000-like [Cicer arietinum] gi|502124170|ref|XP_004498415.1| chr1 46607072 46610132 +
2 domain predictions
 –
Lj1g3v3974840.1
n.a. PREDICTED: probable receptor-like protein kinase At1g67000-like [Cicer arietinum] gi|502124167|ref|XP_004498414.1| chr1 46612963 46616250 -
2 domain predictions
 –
Lj1g3v3977170.1
n.a. PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At3g03770-like [Glycine max] gi|356560829|ref|XP_003548689.1| chr1 47197596 47215688 +
2 domain predictions
 –
Lj1g3v4047300.1
n.a. PREDICTED: receptor-like serine/threonine-protein kinase NCRK-like [Glycine max] gi|356542635|ref|XP_003539772.1| chr1 47777503 47783593 -
2 domain predictions
 –
Lj1g3v4404400.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase RKF3-like [Cicer arietinum] gi|502109379|ref|XP_004493631.1| chr1 51357960 51358769 +
2 domain predictions
 –
Lj1g3v4404420.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase RKF3-like [Glycine max] gi|356504888|ref|XP_003521226.1| chr1 51361567 51365252 +
2 domain predictions
 –
Lj1g3v4528650.1
n.a. PREDICTED: receptor-like serine/threonine-protein kinase ALE2-like [Glycine max] gi|356570688|ref|XP_003553517.1| chr1 53456859 53461643 +
2 domain predictions
 –
Lj1g3v4578820.1
n.a. Serine/threonine protein kinase PBS1 [Medicago truncatula] gi|357510543|ref|XP_003625560.1| chr1 54322051 54325735 -
2 domain predictions
 –
Lj1g3v4579490.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g56130-like [Glycine max] gi|356505222|ref|XP_003521391.1| chr1 54629164 54633146 +
2 domain predictions
 –
Lj1g3v4591000.1
n.a. PREDICTED: probable receptor-like protein kinase At5g47070-like [Glycine max] gi|356572460|ref|XP_003554386.1| chr1 54902556 54906683 +
2 domain predictions
 –
Lj1g3v4614440.1
n.a. PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 32-like [Cicer arietinum] gi|502111482|ref|XP_004494070.1| chr1 55141455 55144929 +
3 domain predictions
 –
Lj1g3v4691720.1
n.a. PREDICTED: wall-associated receptor kinase-like 20-like [Glycine max] gi|356570800|ref|XP_003553572.1| chr1 55638063 55640546 -
2 domain predictions
 –
Lj1g3v4730400.1
n.a. PREDICTED: probable receptor protein kinase TMK1-like [Cicer arietinum] gi|502112140|ref|XP_004494248.1| chr1 56652576 56656895 -
2 domain predictions
 –
Lj1g3v4849450.1
n.a. PREDICTED: receptor-like serine/threonine-protein kinase ALE2-like [Cicer arietinum] gi|502112746|ref|XP_004494430.1| chr1 58709231 58714134 +
2 domain predictions
 –
Lj1g3v4996200.1
n.a. PREDICTED: receptor-like protein kinase ANXUR2-like [Cicer arietinum] gi|502113633|ref|XP_004494710.1| chr1 60679629 60682812 -
2 domain predictions
 –
Lj1g3v5010640.1
n.a. PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like [Glycine max] gi|356546735|ref|XP_003541778.1| chr1 60901967 60904367 +
3 domain predictions
 –
Lj1g3v5021110.1
n.a. Protein kinase-like protein [Medicago truncatula] gi|357512441|ref|XP_003626509.1| chr1 61228559 61231987 -
2 domain predictions
 –
Lj1g3v5061090.1
n.a. PREDICTED: tyrosine-sulfated glycopeptide receptor 1-like [Glycine max] gi|356504209|ref|XP_003520891.1| chr1 62032093 62033579 +
2 domain predictions
 –
Lj2g3v0322770.1
n.a. PREDICTED: probable receptor-like protein kinase At5g24010-like, partial [Cicer arietinum] gi|502120055|ref|XP_004496832.1| chr2 5389361 5392675 -
2 domain predictions
 –
Lj2g3v0473820.1
n.a. PREDICTED: receptor-like serine/threonine-protein kinase At2g45590-like [Cicer arietinum] gi|502146090|ref|XP_004506300.1| chr2 6685241 6689424 +
2 domain predictions
 –
Lj2g3v0561100.1
n.a. Nodulation receptor kinase [Medicago truncatula] gi|357499011|ref|XP_003619794.1| chr2 7443803 7447081 -
2 domain predictions
 –