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Lj1g3v3608350.1

Overview

Field Value
Gene ID Lj1g3v3608350
Transcript ID Lj1g3v3608350.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR27007
5 192 188 5.80E-245 –
PANTHER
PTHR27007:SF61
5 192 188 5.80E-245 –
Gene3D
G3DSA:2.60.120.200
13 44 32 1.10E-06
IPR013320
SUPERFAMILY
SSF56112
14 355 342 1.35E-71
IPR011009
ProSiteProfiles
PS50011
30 341 312 36.626
IPR000719
SMART
SM00220
30 327 298 4.70E-36
IPR000719
Pfam
PF00069
31 319 289 1.10E-43
IPR000719
ProSitePatterns
PS00107
36 65 30 –
IPR017441
Gene3D
G3DSA:3.30.200.20
45 95 51 5.10E-22 –
Gene3D
G3DSA:1.10.510.10
96 322 227 9.90E-37 –
ProSitePatterns
PS00108
156 168 13 –
IPR008271
PANTHER
PTHR27007:SF61
208 386 179 5.80E-245 –
PANTHER
PTHR27007
208 386 179 5.80E-245 –
Gene3D
G3DSA:2.60.120.200
352 444 93 2.40E-06
IPR013320
SUPERFAMILY
SSF56112
403 683 281 3.60E-44
IPR011009
ProSiteProfiles
PS50011
428 710 283 24.457
IPR000719
Pfam
PF07714
435 649 215 6.50E-27
IPR001245
Gene3D
G3DSA:3.30.200.20
445 492 48 2.60E-13 –
Gene3D
G3DSA:1.10.510.10
493 653 161 2.30E-25 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 9

Expression data

Expression pattern

Expression pattern of Lj1g3v3608350.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v3608350.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.