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| Field | Value |
|---|---|
| Gene ID | Lj1g3v3891980 |
| Transcript ID | Lj1g3v3891980.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: serine/threonine-protein kinase PBS1-like isoform X2 [Cicer arietinum] gi|502106624|ref|XP_004493001.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 31 | 31 | 8.50E-201 | – | |
| MobiDBLite | 1 | 57 | 57 | – | – | |
| PANTHER | 1 | 31 | 31 | 8.50E-201 | – | |
| Coils | 11 | 31 | 21 | – | – | |
| Gene3D | 39 | 87 | 49 | 1.60E-09 | ||
| SUPERFAMILY | 52 | 348 | 297 | 2.16E-85 | ||
| PANTHER | 57 | 356 | 300 | 8.50E-201 | – | |
| PANTHER | 57 | 356 | 300 | 8.50E-201 | – | |
| ProSiteProfiles | 73 | 349 | 277 | 40.414 | ||
| SMART | 73 | 349 | 277 | 6.10E-52 | ||
| Pfam | 74 | 343 | 270 | 3.20E-49 | ||
| ProSitePatterns | 79 | 102 | 24 | – | ||
| CDD | 79 | 342 | 264 | 1.60E-103 | – | |
| Gene3D | 88 | 150 | 63 | 3.50E-28 | – | |
| Gene3D | 151 | 352 | 202 | 7.00E-45 | – | |
| ProSitePatterns | 196 | 208 | 13 | – | ||
| MobiDBLite | 360 | 419 | 60 | – | – | |
| PANTHER | 389 | 410 | 22 | 8.50E-201 | – | |
| PANTHER | 389 | 410 | 22 | 8.50E-201 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj1g3v3891980.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v3891980.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.