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| Field | Value |
|---|---|
| Gene ID | Lj1g3v3407720 |
| Transcript ID | Lj1g3v3407720.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g16250-like [Glycine max] gi|356509565|ref|XP_003523518.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 24 | 24 | – | – | |
| Phobius | 1 | 7 | 7 | – | – | |
| Phobius | 1 | 24 | 24 | – | – | |
| PANTHER | 7 | 415 | 409 | 0 | – | |
| TMHMM | 7 | 26 | 20 | – | – | |
| PANTHER | 7 | 415 | 409 | 0 | – | |
| Phobius | 8 | 19 | 12 | – | – | |
| Phobius | 20 | 24 | 5 | – | – | |
| Phobius | 25 | 442 | 418 | – | – | |
| TMHMM | 58 | 80 | 23 | – | – | |
| SUPERFAMILY | 93 | 397 | 305 | 1.16E-50 | ||
| Gene3D | 95 | 205 | 111 | 9.50E-27 | ||
| SMART | 125 | 148 | 24 | 130 | ||
| Pfam | 126 | 186 | 61 | 7.80E-11 | ||
| ProSiteProfiles | 127 | 149 | 23 | 4.616 | ||
| SMART | 149 | 172 | 24 | 5.2 | ||
| ProSiteProfiles | 151 | 173 | 23 | 6.873 | ||
| SMART | 173 | 196 | 24 | 20 | ||
| ProSiteProfiles | 175 | 198 | 24 | 5.271 | ||
| SMART | 197 | 220 | 24 | 230 | ||
| ProSiteProfiles | 199 | 221 | 23 | 5.171 | ||
| Pfam | 199 | 256 | 58 | 1.20E-06 | ||
| Gene3D | 206 | 386 | 181 | 7.50E-38 | ||
| SMART | 221 | 244 | 24 | 0.0069 | ||
| ProSiteProfiles | 223 | 245 | 23 | 7.797 | ||
| ProSiteProfiles | 246 | 269 | 24 | 4.532 | ||
| SMART | 317 | 341 | 25 | 250 | ||
| ProSiteProfiles | 319 | 341 | 23 | 4.662 | ||
| Gene3D | 425 | 527 | 103 | 3.50E-07 | ||
| PANTHER | 436 | 800 | 365 | 0 | – | |
| PANTHER | 436 | 800 | 365 | 0 | – | |
| TMHMM | 443 | 465 | 23 | – | – | |
| Phobius | 443 | 468 | 26 | – | – | |
| Phobius | 469 | 895 | 427 | – | – | |
| MobiDBLite | 476 | 495 | 20 | – | – | |
| SUPERFAMILY | 499 | 800 | 302 | 1.66E-40 | ||
| ProSiteProfiles | 519 | 805 | 287 | 22.096 | ||
| Pfam | 525 | 798 | 274 | 2.50E-20 | ||
| Gene3D | 528 | 595 | 68 | 4.60E-09 | – | |
| Gene3D | 596 | 806 | 211 | 3.00E-21 | – | |
| MobiDBLite | 845 | 895 | 51 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj1g3v3407720.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v3407720.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.