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Lj1g3v4528650.1

Overview

Field Value
Gene ID Lj1g3v4528650
Transcript ID Lj1g3v4528650.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: receptor-like serine/threonine-protein kinase ALE2-like [Glycine max] gi|356570688|ref|XP_003553517.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius
NON_CYTOPLASMIC_DOMAIN
1 140 140 – –
PANTHER
PTHR27001
98 188 91 2.10E-293 –
PANTHER
PTHR27001:SF10
98 188 91 2.10E-293 –
Gene3D
G3DSA:2.60.120.200
130 237 108 4.40E-12
IPR013320
Phobius
TRANSMEMBRANE
141 163 23 – –
TMHMM
TMhelix
141 163 23 – –
Phobius
CYTOPLASMIC_DOMAIN
164 635 472 – –
SUPERFAMILY
SSF56112
209 507 299 5.47E-81
IPR011009
PANTHER
PTHR27001:SF10
215 545 331 2.10E-293 –
PANTHER
PTHR27001
215 545 331 2.10E-293 –
ProSiteProfiles
PS50011
231 507 277 38.223
IPR000719
Pfam
PF07714
233 503 271 5.00E-49
IPR001245
CDD
cd14066
237 507 271 1.95E-97 –
ProSitePatterns
PS00107
237 259 23 –
IPR017441
Gene3D
G3DSA:3.30.200.20
238 293 56 1.80E-23 –
Gene3D
G3DSA:1.10.510.10
294 504 211 2.20E-43 –
ProSitePatterns
PS00108
354 366 13 –
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 16

Expression data

Expression pattern

Expression pattern of Lj1g3v4528650.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v4528650.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.