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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR002182
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 683 results. Now displaying 2 of 14 with 50 rows per page. This search has taken 6.167s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0168689.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356573485|ref|XP_003554889.1| chr0 80552560 80554280 -
2 domain predictions
1 GO term
Lj0g3v0168919.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356545124|ref|XP_003540995.1| chr0 80680070 80683104 +
2 domain predictions
1 GO term
Lj0g3v0168919.2
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356545124|ref|XP_003540995.1| chr0 80680070 80683104 +
2 domain predictions
1 GO term
Lj0g3v0174759.1
n.a. TIR-similar-domain-containing protein TSDC [Medicago truncatula] gi|357494551|ref|XP_003617564.1| chr0 84331056 84333540 +
2 domain predictions
1 GO term
Lj0g3v0183759.1
n.a. NBS-containing resistance-like protein [Medicago truncatula] gi|357460983|ref|XP_003600773.1| chr0 89281396 89282491 -
2 domain predictions
1 GO term
Lj0g3v0186439.1
n.a. PREDICTED: probable disease resistance protein At1g52660-like [Cicer arietinum] gi|502183056|ref|XP_004517051.1| chr0 90852101 90852988 +
2 domain predictions
1 GO term
Lj0g3v0187769.1
n.a. Tir-nbs-lrr resistance protein [Medicago truncatula] gi|357468521|ref|XP_003604545.1| chr0 91607040 91612667 -
2 domain predictions
1 GO term
Lj0g3v0187769.2
n.a. Tir-nbs-lrr resistance protein [Medicago truncatula] gi|357468519|ref|XP_003604544.1| chr0 91609723 91612667 -
2 domain predictions
1 GO term
Lj0g3v0188119.1
n.a. TMV resistance protein N [Medicago truncatula] gi|357469545|ref|XP_003605057.1| chr0 91861757 91868805 -
2 domain predictions
1 GO term
Lj0g3v0188449.1
n.a. PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Glycine max] gi|356570357|ref|XP_003553356.1| chr0 92097504 92100148 -
2 domain predictions
1 GO term
Lj0g3v0197319.1
n.a. NBS-LRR resistance protein [Medicago truncatula] gi|357490923|ref|XP_003615749.1| chr0 96221945 96226874 -
2 domain predictions
1 GO term
Lj0g3v0197999.1
n.a. PREDICTED: TMV resistance protein N-like [Cicer arietinum] gi|502156470|ref|XP_004510490.1| chr0 96462692 96469107 -
2 domain predictions
1 GO term
Lj0g3v0201709.1
n.a. CCP [Medicago truncatula] gi|357494181|ref|XP_003617379.1| chr0 99797286 99800542 +
2 domain predictions
1 GO term
Lj0g3v0203979.1
n.a. Cc-nbs-lrr resistance protein [Medicago truncatula] gi|357494411|ref|XP_003617494.1| chr0 101123931 101125989 -
2 domain predictions
1 GO term
Lj0g3v0211479.1
n.a. heat shock protein 70, partial [Ziziphus jujuba] gi|410369164|gb|AFV66576.1| chr0 106545366 106549282 -
2 domain predictions
1 GO term
Lj0g3v0212039.1
n.a. PREDICTED: TMV resistance protein N-like [Cicer arietinum] gi|502156470|ref|XP_004510490.1| chr0 106927287 106932003 -
2 domain predictions
1 GO term
Lj0g3v0213739.1
n.a. Tir-nbs-lrr resistance protein [Medicago truncatula] gi|357468521|ref|XP_003604545.1| chr0 108005844 108010811 -
2 domain predictions
1 GO term
Lj0g3v0214779.1
n.a. TIR-NBS-LRR type disease resistance protein [Medicago truncatula] gi|357452805|ref|XP_003596679.1| chr0 108871376 108877767 +
2 domain predictions
1 GO term
Lj0g3v0217599.1
n.a. Resistance protein [Medicago truncatula] gi|357456379|ref|XP_003598470.1| chr0 110750676 110752854 -
2 domain predictions
1 GO term
Lj0g3v0217609.1
n.a. NBS resistance protein [Medicago truncatula] gi|357456371|ref|XP_003598466.1| chr0 110753999 110758886 -
2 domain predictions
1 GO term
Lj0g3v0221309.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356542397|ref|XP_003539653.1| chr0 113535537 113541310 -
2 domain predictions
1 GO term
Lj0g3v0221339.1
n.a. NBS-containing resistance-like protein [Medicago truncatula] gi|357469529|ref|XP_003605049.1| chr0 113547039 113556094 -
2 domain predictions
1 GO term
Lj0g3v0221339.2
n.a. NBS-containing resistance-like protein [Medicago truncatula] gi|357469529|ref|XP_003605049.1| chr0 113547726 113556094 -
2 domain predictions
1 GO term
Lj0g3v0223409.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356570335|ref|XP_003553345.1| chr0 115180723 115187482 +
2 domain predictions
1 GO term
Lj0g3v0227319.1
n.a. Disease resistance protein RPM1 [Medicago truncatula] gi|357515045|ref|XP_003627811.1| chr0 117437501 117439061 +
2 domain predictions
1 GO term
Lj0g3v0233449.1
n.a. n.a. chr0 120875579 120883284 -
2 domain predictions
1 GO term
Lj0g3v0234849.1
n.a. PREDICTED: TMV resistance protein N-like [Cicer arietinum] gi|502156468|ref|XP_004510489.1| chr0 121686384 121687452 -
2 domain predictions
1 GO term
Lj0g3v0236369.1
n.a. NB-LRR type disease resistance protein Rps1-k-2 [Medicago truncatula] gi|357457003|ref|XP_003598782.1| chr0 122506407 122507299 +
2 domain predictions
1 GO term
Lj0g3v0239969.1
n.a. TIR-NBS-LRR RCT1 resistance protein [Medicago truncatula] gi|357468645|ref|XP_003604607.1| chr0 124548317 124550771 +
2 domain predictions
1 GO term
Lj0g3v0239979.1
n.a. Disease resistance protein [Medicago truncatula] gi|357468563|ref|XP_003604566.1| chr0 124550590 124551031 +
2 domain predictions
1 GO term
Lj0g3v0245149.1
n.a. Disease resistance protein [Medicago truncatula] gi|357468563|ref|XP_003604566.1| chr0 127102014 127102455 +
2 domain predictions
1 GO term
Lj0g3v0245159.1
n.a. Disease resistance protein [Medicago truncatula] gi|357468563|ref|XP_003604566.1| chr0 127102014 127102275 +
2 domain predictions
1 GO term
Lj0g3v0245169.1
n.a. TIR-NBS-LRR RCT1-like resistance protein [Medicago truncatula] gi|357468659|ref|XP_003604614.1| chr0 127102402 127102803 +
2 domain predictions
1 GO term
Lj0g3v0245179.1
n.a. n.a. chr0 127102402 127102964 +
2 domain predictions
1 GO term
Lj0g3v0247399.1
n.a. resistance protein MG63 [Glycine max] gi|9965107|gb|AAG09953.1|AF175398_1 chr0 128195992 128203883 -
2 domain predictions
1 GO term
Lj0g3v0247409.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356561802|ref|XP_003549167.1| chr0 128197093 128203883 -
2 domain predictions
1 GO term
Lj0g3v0247409.2
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356561802|ref|XP_003549167.1| chr0 128197093 128203883 -
2 domain predictions
1 GO term
Lj0g3v0247409.3
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356561802|ref|XP_003549167.1| chr0 128197093 128203883 -
2 domain predictions
1 GO term
Lj0g3v0254329.2
n.a. Cc-nbs-lrr resistance protein [Medicago truncatula] gi|357494411|ref|XP_003617494.1| chr0 132048903 132052054 +
2 domain predictions
1 GO term
Lj0g3v0254349.1
n.a. Cc-nbs-lrr resistance protein [Medicago truncatula] gi|357494411|ref|XP_003617494.1| chr0 132058195 132060524 +
2 domain predictions
1 GO term
Lj0g3v0254369.1
n.a. Cc-nbs-lrr resistance protein [Medicago truncatula] gi|357494411|ref|XP_003617494.1| chr0 132063443 132066704 +
2 domain predictions
1 GO term
Lj0g3v0255889.1
n.a. NBS-LRR resistance-like protein [Medicago truncatula] gi|357521387|ref|XP_003630982.1| chr0 132878474 132884068 +
2 domain predictions
1 GO term
Lj0g3v0259009.2
n.a. Tir-nbs-lrr resistance protein [Medicago truncatula] gi|357468521|ref|XP_003604545.1| chr0 134553318 134556859 +
2 domain predictions
1 GO term
Lj0g3v0262799.1
n.a. NBS-LRR type disease resistance protein [Medicago truncatula] gi|357458621|ref|XP_003599591.1| chr0 136306291 136307962 +
2 domain predictions
1 GO term
Lj0g3v0267779.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356573485|ref|XP_003554889.1| chr0 138752065 138765617 -
2 domain predictions
1 GO term
Lj0g3v0268419.1
n.a. TMV resistance protein N [Medicago truncatula] gi|357504435|ref|XP_003622506.1| chr0 138940781 138945800 +
2 domain predictions
1 GO term
Lj0g3v0269369.1
n.a. PREDICTED: probable disease resistance protein At5g66900-like [Glycine max] gi|356495456|ref|XP_003516593.1| chr0 139560832 139565410 -
2 domain predictions
1 GO term
Lj0g3v0273259.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356570335|ref|XP_003553345.1| chr0 141600345 141607745 -
2 domain predictions
1 GO term
Lj0g3v0273259.2
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356570335|ref|XP_003553345.1| chr0 141600345 141607745 -
2 domain predictions
1 GO term
Lj0g3v0275419.1
n.a. NBS resistance protein-like protein [Medicago truncatula] gi|357469163|ref|XP_003604866.1| chr0 142856976 142868107 -
2 domain predictions
1 GO term