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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR013057
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We have found 242 results. Now displaying 5 of 5 with 50 rows per page. This search has taken 5.963s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi4g1v0412100.2
n.a. Amino acid permease; TAIR: AT5G09220.1 amino acid permease 2; Swiss-Prot: sp|Q38967|AAP2_ARATH Amino acid permease 2; TrEMBL-Plants: tr|G7LEY2|G7LEY2_MEDTR Transmembrane amino acid transporter family protein; Found in the gene: LotjaGi4g1v0412100 LjG1.1_chr4 78800003 78801563 -
2 domain predictions
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LotjaGi4g1v0433400.1
n.a. Amino acid transporter family protein; TAIR: AT5G41800.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|Q8L4X4|GAT2_ARATH Probable GABA transporter 2; TrEMBL-Plants: tr|I1K6A7|I1K6A7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0433400 LjG1.1_chr4 80761261 80768114 +
2 domain predictions
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LotjaGi4g1v0433400.2
n.a. Amino acid transporter family protein; TAIR: AT5G41800.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|Q8L4X4|GAT2_ARATH Probable GABA transporter 2; TrEMBL-Plants: tr|K7KRY1|K7KRY1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0433400 LjG1.1_chr4 80761532 80767308 +
2 domain predictions
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LotjaGi5g1v0175800.1
n.a. Amino acid transporter, putative; TAIR: AT1G08230.3 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|F4HW02|GAT1_ARATH GABA transporter 1; TrEMBL-Plants: tr|A0A151S330|A0A151S330_CAJCA Amino acid permease 8; Found in the gene: LotjaGi5g1v0175800 LjG1.1_chr5 44894244 44899920 -
2 domain predictions
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LotjaGi5g1v0175800.2
n.a. Amino acid transporter, putative; TAIR: AT1G08230.4 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|F4HW02|GAT1_ARATH GABA transporter 1; TrEMBL-Plants: tr|A0A151S330|A0A151S330_CAJCA Amino acid permease 8; Found in the gene: LotjaGi5g1v0175800 LjG1.1_chr5 44895577 44899868 -
2 domain predictions
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LotjaGi5g1v0175800.3
n.a. Amino acid transporter, putative; TAIR: AT1G08230.3 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|F4HW02|GAT1_ARATH GABA transporter 1; TrEMBL-Plants: tr|A0A151S330|A0A151S330_CAJCA Amino acid permease 8; Found in the gene: LotjaGi5g1v0175800 LjG1.1_chr5 44896250 44899658 -
2 domain predictions
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LotjaGi5g1v0175800.4
n.a. Amino acid transporter, putative; TAIR: AT1G08230.2 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|F4HW02|GAT1_ARATH GABA transporter 1; TrEMBL-Plants: tr|A0A151S330|A0A151S330_CAJCA Amino acid permease 8; Found in the gene: LotjaGi5g1v0175800 LjG1.1_chr5 44896250 44899688 -
2 domain predictions
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LotjaGi5g1v0267300.1
n.a. Amino acid transporter, putative; TAIR: AT1G25530.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|Q9C6M2|LHTL6_ARATH Lysine histidine transporter-like 6; TrEMBL-Plants: tr|I3SWX2|I3SWX2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0267300 LjG1.1_chr5 57911467 57915115 +
2 domain predictions
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LotjaGi5g1v0267300.2
n.a. Amino acid transporter, putative; TAIR: AT1G25530.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|Q9C6M2|LHTL6_ARATH Lysine histidine transporter-like 6; TrEMBL-Plants: tr|I3SWX2|I3SWX2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0267300 LjG1.1_chr5 57911959 57914676 +
2 domain predictions
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LotjaGi5g1v0267300.3
n.a. Lysine histidine transporter; TAIR: AT1G25530.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|Q9C6M2|LHTL6_ARATH Lysine histidine transporter-like 6; TrEMBL-Plants: tr|I3SWX2|I3SWX2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0267300 LjG1.1_chr5 57911965 57914676 +
2 domain predictions
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LotjaGi5g1v0271500.1
n.a. Amino acid transporter family protein; TAIR: AT2G39130.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|P47082|AVT1_YEAST Vacuolar amino acid transporter 1; TrEMBL-Plants: tr|A0A072VPC5|A0A072VPC5_MEDTR Transmembrane amino acid transporter family protein; Found in the gene: LotjaGi5g1v0271500 LjG1.1_chr5 58522553 58529283 +
2 domain predictions
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LotjaGi5g1v0271500.2
n.a. Amino acid transporter family protein; TAIR: AT2G39130.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|P47082|AVT1_YEAST Vacuolar amino acid transporter 1; TrEMBL-Plants: tr|A0A072VPC5|A0A072VPC5_MEDTR Transmembrane amino acid transporter family protein; Found in the gene: LotjaGi5g1v0271500 LjG1.1_chr5 58522584 58529046 +
2 domain predictions
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LotjaGi5g1v0319700.1
n.a. Amino acid permease; TAIR: AT5G49630.1 amino acid permease 6; Swiss-Prot: sp|P92934|AAP6_ARATH Amino acid permease 6; TrEMBL-Plants: tr|A0A072VRE6|A0A072VRE6_MEDTR Transmembrane amino acid transporter family protein; Found in the gene: LotjaGi5g1v0319700 LjG1.1_chr5 63696898 63703683 -
2 domain predictions
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LotjaGi6g1v0020600.1
n.a. Amino acid transporter family protein; TAIR: AT2G39130.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|P47082|AVT1_YEAST Vacuolar amino acid transporter 1; TrEMBL-Plants: tr|K7K8P1|K7K8P1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0020600 LjG1.1_chr6 3793656 3803789 -
2 domain predictions
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LotjaGi6g1v0069200.1
n.a. Proline transporter; TAIR: AT2G39890.1 proline transporter 1; Swiss-Prot: sp|P92961|PROT1_ARATH Proline transporter 1; TrEMBL-Plants: tr|A0A0L9U8Q0|A0A0L9U8Q0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0069200 LjG1.1_chr6 13255633 13261259 +
2 domain predictions
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LotjaGi6g1v0069200.2
n.a. Proline transporter; TAIR: AT2G39890.1 proline transporter 1; Swiss-Prot: sp|P92961|PROT1_ARATH Proline transporter 1; TrEMBL-Plants: tr|A0A0L9U8Q0|A0A0L9U8Q0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0069200 LjG1.1_chr6 13256294 13258882 +
2 domain predictions
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LotjaGi6g1v0072000.1
n.a. Auxin influx transporter; TAIR: AT2G38120.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|Q9FEL8|LAX1_MEDTR Auxin transporter-like protein 1; TrEMBL-Plants: tr|I1MZ39|I1MZ39_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0072000 LjG1.1_chr6 13652802 13658378 +
2 domain predictions
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LotjaGi6g1v0072000.2
n.a. Auxin influx transporter; TAIR: AT2G38120.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|Q9FEL8|LAX1_MEDTR Auxin transporter-like protein 1; TrEMBL-Plants: tr|I1MZ39|I1MZ39_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0072000 LjG1.1_chr6 13653681 13658037 +
2 domain predictions
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LotjaGi6g1v0072000.3
n.a. Auxin influx transporter; TAIR: AT2G38120.2 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|Q9FEL8|LAX1_MEDTR Auxin transporter-like protein 1; TrEMBL-Plants: tr|I1MZ39|I1MZ39_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0072000 LjG1.1_chr6 13653690 13656251 +
2 domain predictions
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LotjaGi6g1v0072000.4
n.a. Auxin influx transporter; TAIR: AT2G38120.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|Q9FEL8|LAX1_MEDTR Auxin transporter-like protein 1; TrEMBL-Plants: tr|I1MZ39|I1MZ39_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0072000 LjG1.1_chr6 13653690 13658016 +
2 domain predictions
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LotjaGi6g1v0072000.5
n.a. Auxin influx transporter; TAIR: AT2G38120.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|Q9FEL8|LAX1_MEDTR Auxin transporter-like protein 1; TrEMBL-Plants: tr|I1MZ39|I1MZ39_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0072000 LjG1.1_chr6 13653690 13658016 +
2 domain predictions
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LotjaGi6g1v0072000.6
n.a. Auxin influx transporter; TAIR: AT2G38120.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|Q9FEL8|LAX1_MEDTR Auxin transporter-like protein 1; TrEMBL-Plants: tr|G7KGX5|G7KGX5_MEDTR Auxin influx transporter; Found in the gene: LotjaGi6g1v0072000 LjG1.1_chr6 13653723 13658037 +
2 domain predictions
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LotjaGi6g1v0072000.7
n.a. Auxin influx transporter; TAIR: AT2G38120.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|Q9FEL8|LAX1_MEDTR Auxin transporter-like protein 1; TrEMBL-Plants: tr|G7KGX5|G7KGX5_MEDTR Auxin influx transporter; Found in the gene: LotjaGi6g1v0072000 LjG1.1_chr6 13653738 13658016 +
2 domain predictions
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LotjaGi6g1v0072000.8
n.a. Auxin influx transporter; TAIR: AT2G38120.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|Q9FEL8|LAX1_MEDTR Auxin transporter-like protein 1; TrEMBL-Plants: tr|G7KGX5|G7KGX5_MEDTR Auxin influx transporter; Found in the gene: LotjaGi6g1v0072000 LjG1.1_chr6 13655896 13658016 +
2 domain predictions
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LotjaGi6g1v0079600.1
n.a. Amino acid transporter protein; TAIR: AT3G56200.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|Q6DEL1|S38A7_DANRE Putative sodium-coupled neutral amino acid transporter 7; TrEMBL-Plants: tr|I1LMW8|I1LMW8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0079600 LjG1.1_chr6 15171744 15186432 +
2 domain predictions
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LotjaGi6g1v0079600.2
n.a. Amino acid transporter protein; TAIR: AT3G56200.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|Q6DEL1|S38A7_DANRE Putative sodium-coupled neutral amino acid transporter 7; TrEMBL-Plants: tr|I1LMW8|I1LMW8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0079600 LjG1.1_chr6 15171744 15186655 +
2 domain predictions
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LotjaGi6g1v0079600.3
n.a. Amino acid transporter protein; TAIR: AT3G56200.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|Q8IZM9|S38A6_HUMAN Probable sodium-coupled neutral amino acid transporter 6; TrEMBL-Plants: tr|I1LMW8|I1LMW8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0079600 LjG1.1_chr6 15171987 15175183 +
2 domain predictions
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LotjaGi6g1v0079600.4
n.a. Amino acid transporter protein; TAIR: AT3G56200.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|Q28HE5|S38A6_XENTR Probable sodium-coupled neutral amino acid transporter 6; TrEMBL-Plants: tr|I1LMW8|I1LMW8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0079600 LjG1.1_chr6 15173292 15175183 +
2 domain predictions
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LotjaGi6g1v0082400.1
n.a. Amino acid transporter protein; TAIR: AT3G56200.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|Q8IZM9|S38A6_HUMAN Probable sodium-coupled neutral amino acid transporter 6; TrEMBL-Plants: tr|I1LMW8|I1LMW8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0082400 LjG1.1_chr6 16075830 16079346 +
2 domain predictions
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LotjaGi6g1v0082400.2
n.a. Amino acid transporter protein; TAIR: AT3G56200.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|Q28HE5|S38A6_XENTR Probable sodium-coupled neutral amino acid transporter 6; TrEMBL-Plants: tr|I1LMW8|I1LMW8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0082400 LjG1.1_chr6 16076639 16078547 +
2 domain predictions
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LotjaGi6g1v0126800.1
n.a. Amino acid transporter, putative; TAIR: AT3G28960.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|P47082|AVT1_YEAST Vacuolar amino acid transporter 1; TrEMBL-Plants: tr|A0A072UYA2|A0A072UYA2_MEDTR Transmembrane amino acid transporter family protein; Found in the gene: LotjaGi6g1v0126800 LjG1.1_chr6 32709349 32715451 -
2 domain predictions
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LotjaGi6g1v0137100.1
n.a. Amino acid permease; TAIR: AT5G23810.1 amino acid permease 7; Swiss-Prot: sp|Q9FF99|AAP7_ARATH Probable amino acid permease 7; TrEMBL-Plants: tr|A0A0B2RID7|A0A0B2RID7_GLYSO Putative amino acid permease 7; Found in the gene: LotjaGi6g1v0137100 LjG1.1_chr6 39902495 39907959 -
2 domain predictions
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LotjaGi6g1v0137100.2
n.a. Amino acid permease; TAIR: AT1G77380.1 amino acid permease 3; Swiss-Prot: sp|Q39134|AAP3_ARATH Amino acid permease 3; TrEMBL-Plants: tr|A0A0B2RID7|A0A0B2RID7_GLYSO Putative amino acid permease 7; Found in the gene: LotjaGi6g1v0137100 LjG1.1_chr6 39903725 39904726 -
2 domain predictions
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LotjaGi6g1v0137100.3
n.a. Amino acid permease; TAIR: AT5G23810.1 amino acid permease 7; Swiss-Prot: sp|Q9FF99|AAP7_ARATH Probable amino acid permease 7; TrEMBL-Plants: tr|K7MQE6|K7MQE6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0137100 LjG1.1_chr6 39903725 39905651 -
2 domain predictions
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LotjaGi6g1v0137400.1
n.a. Amino acid permease; TAIR: AT5G23810.1 amino acid permease 7; Swiss-Prot: sp|Q9FF99|AAP7_ARATH Probable amino acid permease 7; TrEMBL-Plants: tr|I1N062|I1N062_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0137400 LjG1.1_chr6 40060395 40065211 -
2 domain predictions
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LotjaGi6g1v0137500.1
n.a. Amino acid permease; TAIR: AT5G23810.1 amino acid permease 7; Swiss-Prot: sp|Q9FF99|AAP7_ARATH Probable amino acid permease 7; TrEMBL-Plants: tr|I1N062|I1N062_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0137500 LjG1.1_chr6 40067959 40071291 -
2 domain predictions
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LotjaGi6g1v0137500.2
n.a. Amino acid permease; TAIR: AT5G23810.1 amino acid permease 7; Swiss-Prot: sp|Q9FF99|AAP7_ARATH Probable amino acid permease 7; TrEMBL-Plants: tr|I1N062|I1N062_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0137500 LjG1.1_chr6 40068474 40070564 -
2 domain predictions
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LotjaGi6g1v0137600.1
n.a. Amino acid permease; TAIR: AT5G23810.1 amino acid permease 7; Swiss-Prot: sp|Q9FF99|AAP7_ARATH Probable amino acid permease 7; TrEMBL-Plants: tr|I1KYS1|I1KYS1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0137600 LjG1.1_chr6 40126250 40130942 -
2 domain predictions
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LotjaGi6g1v0137600.2
n.a. Amino acid permease; TAIR: AT5G23810.1 amino acid permease 7; Swiss-Prot: sp|Q9FF99|AAP7_ARATH Probable amino acid permease 7; TrEMBL-Plants: tr|I1KYS1|I1KYS1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0137600 LjG1.1_chr6 40126309 40130916 -
2 domain predictions
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LotjaGi6g1v0188300.1
n.a. Amino acid transporter, putative; TAIR: AT5G40780.1 lysine histidine transporter 1; Swiss-Prot: sp|Q9FKS8|LHT1_ARATH Lysine histidine transporter 1; TrEMBL-Plants: tr|A0A1J7HPB0|A0A1J7HPB0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0188300 LjG1.1_chr6 48336912 48340253 +
2 domain predictions
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LotjaGi6g1v0188300.2
n.a. Lysine histidine transporter; TAIR: AT5G40780.1 lysine histidine transporter 1; Swiss-Prot: sp|Q9FKS8|LHT1_ARATH Lysine histidine transporter 1; TrEMBL-Plants: tr|C6TCC5|C6TCC5_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi6g1v0188300 LjG1.1_chr6 48338728 48339819 +
2 domain predictions
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LotjaGi6g1v0337300.2
n.a. Lysine/histidine transporter; TAIR: AT1G47670.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|Q9SX98|LHTL8_ARATH Lysine histidine transporter-like 8; TrEMBL-Plants: tr|G7ILF8|G7ILF8_MEDTR Transmembrane amino acid transporter family protein; Found in the gene: LotjaGi6g1v0337300 LjG1.1_chr6 65188905 65192941 -
2 domain predictions
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