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TREX

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001180
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We have found 8 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.609s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
n.a. PREDICTED: vam6/Vps39-like protein-like isoform X2 [Cicer arietinum] gi|502153212|ref|XP_004509258.1| chr0 134854906 134861988 -
n.a. PREDICTED: vam6/Vps39-like protein-like [Glycine max] gi|356496767|ref|XP_003517237.1| chr2 26987452 26994155 -
n.a. PREDICTED: transforming growth factor-beta receptor-associated protein 1 homolog isoform X1 [Cicer arietinum] gi|502155930|ref|XP_004510242.1| chr3 7929832 7944508 +
n.a. Vam6/Vps39-like protein; TAIR: AT4G36630.2 Vacuolar sorting protein 39; Swiss-Prot: sp|Q8R5L3|VPS39_MOUSE Vam6/Vps39-like protein; TrEMBL-Plants: tr|G7LES7|G7LES7_MEDTR Vam6/Vps39-like protein; Found in the gene: LotjaGi1g1v0416300 LjG1.1_chr1 90957795 90966656 +
n.a. Vam6/Vps39-like protein; TAIR: AT4G36630.1 Vacuolar sorting protein 39; Swiss-Prot: sp|Q96JC1|VPS39_HUMAN Vam6/Vps39-like protein; TrEMBL-Plants: tr|A0A0R0LJG6|A0A0R0LJG6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0390200 LjG1.1_chr2 88607512 88614907 -
n.a. Vam6/Vps39-like protein; TAIR: AT4G36630.1 Vacuolar sorting protein 39; Swiss-Prot: sp|Q96JC1|VPS39_HUMAN Vam6/Vps39-like protein; TrEMBL-Plants: tr|A0A0R0LJG6|A0A0R0LJG6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0390200 LjG1.1_chr2 88607877 88614718 -
n.a. Transforming growth factor-beta receptor-associated protein 1; TAIR: AT1G22860.1 Vacuolar sorting protein 39; Swiss-Prot: sp|A4IG72|TGFA1_DANRE Transforming growth factor-beta receptor-associated protein 1 homolog; TrEMBL-Plants: tr|A0A072TMN8|A0A072TMN8_MEDTR Vacuolar sorting protein 39 domain protein; Found in the gene: LotjaGi3g1v0087800 LjG1.1_chr3 9916711 9929973 -
n.a. Vam6/Vps39-like protein; TAIR: AT4G36630.1 Vacuolar sorting protein 39; Swiss-Prot: sp|Q8R5L3|VPS39_MOUSE Vam6/Vps39-like protein; TrEMBL-Plants: tr|G7LES7|G7LES7_MEDTR Vam6/Vps39-like protein; Found in the gene: LotjaGi4g1v0117000 LjG1.1_chr4 16942437 16956759 +