Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0416300 |
| Transcript ID | LotjaGi1g1v0416300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Vam6/Vps39-like protein; TAIR: AT4G36630.2 Vacuolar sorting protein 39; Swiss-Prot: sp|Q8R5L3|VPS39_MOUSE Vam6/Vps39-like protein; TrEMBL-Plants: tr|G7LES7|G7LES7_MEDTR Vam6/Vps39-like protein; Found in the gene: LotjaGi1g1v0416300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:90957795..90966656) extracted from Lotus japonicus Gifu genome v1.2.
ATCTTATACTACCCAATCTGTAAAGCTATTGAATTCATACAAAAAAAACGCATGGTTCTATTGAAGCGTTCCCCGCCATC GGGACGCAAAAATGCGTGGCAACTTCGATCCAAACACCCGCGATTGCTGCACTAAACGGCGTCGTCTACAACCATCCGAA CGACAGTGAAGAACGAAAACCAGCTTCGAGATCAAAATTCAACACACAAAATGGTGCACAGCGCCTACGATTCCTTCGAG CTCCTCACCGATTGCCCTTCGAAGATCGAATCCGTCGAACCGTACGGTTCCAAAATCCTCCTCGGATGCGCCGACGGCTC CCTCCAAATCTACGCGCCGGCGACGGCGGAGGAGGAGGAGGAGGAGCTGCGGAAGGAGGCTTACGCGCTTGAGAGAAGCG TGACCGGCTTCGCGAAGAAGCCTGTGGTGTCAATGCAGGTTGTGGAATCGAGAGAGATGCTCCTCTCGCTCTCAGAATCC ATCGCGTTTCACAGGCTTTCCACGTTTGAAACCATTGCTGTCATCACCAAGGCCAAGGGCGCACATGCCTTCTGCTGGGA TGAACGCAGAGGCTTCTTGTGCTTCGCCAGGCAGAAGCGGCTCTGTATCTTCCGACATGACGGTGAGTAATTCCCCTTCA TCCAATGAATGCTATTTTGTAATTTCAATTTCATTGTTGATTAGGTTTTTGAAATTCTGTAATTAATTTAGATTATTGCG TTATGGACTAGTATGATATGAATAATGTTGTGTTTACCATTCATTTCCACCTCCACCTTTGATAAATATGACGAGAAGAG AGAAAAAAATGAGAGATATAATATGTGATGTGACAGGAAATGCGAAGAGATATGAAGAAAAATGTGTGGAAATGAGTGTC AGAGAAAGTGAAGTGTGAACATATCATTACTCGGACACAACATGAATATAATAGAATGCATAAACTAGTATAGATTATGG AACACAAATCTTCAACTAAAGGAGAGAATTAATATTGTGAAAGTTAGCTTGAGTGGTTTTAAACATAATAAAATGCTATC ATTTTTTTAAACTATTGTTGTTTGAAAAATAGAAGTGTAAAAAGTAAAAATATAGCTAGAAGTATCCAAAGTTTCCAACA TGAATATGTATAGCACCTCAAGATTACTATTTTGAAGTGTCTGTGATGCTTTGGCTATGATGAGTGGTGATGACCTGTTG TTGTTGGTGTTTTGTCTAGGTGGTAGAGGATTTGTGGAGGTGAAAGACTTTGGTGTTCCTGATGTGGTGAAGTCGATGTG TTGGTGCGGTGAGAATGTATGCTTGGGCATCAGGAAAGAGTATATGATTCTGAATGCCACGAATGGTGCACTGTCTGAGG TTTTTACTTCCGGGAGGATAGCACCGCCTTTAGTTGTCTCGCTTCCTTATGGTGAACTTCTTCTTGGCAAGGTTTTTACT TCTTGCTTTGACTCTTGAAAAATATGCTAATGTATCAAGTATTGGTTTAAATTTACTAGCCTATAACTTTTCTTGACACA AGATTTCCCCAGTTTCAAAAGAAACAATGTTCGAGAGAATATGTTCAGACAAGCTTTGATAGATCCGTAGGAAAAATATT GATGTTTGTATTGGAATTAGAACACAACTAATGGTGCTGATCACTGTCCTTAAGGGTTTATCATAAGCATATTTCAATAA CATCAATCAAAGAATTTGTTGGGCAAAATTTGAGGACTACTGGAATGGGAAGTCATTCGGTCAGAGGTTCTTGCCAACTG TCATTCTGAAACACCCAATATCTTAGTTACTTGGTTTTATTTACGTTTAGATCATCTTTTCAAATCATCCTACTTCATAA TTTTCATTTTCTTCAGTCAGATAAGCTAATATTCTTGCGCATTTTTAGGAGAACATTGGCGTCATTGTGGACCAAAATGG AAAACTTCGTCCAGAAGGTAGGATTTGTTGGTCAGAGGCCCCAGCAGAAGTTGTAATACCGAAGCCATATGCTATAGCAC TGCTGCCTAGATTTGTGGAGGTAACTAAGTATTTGGATTCAAGCTGTTTGCTCGTCAAGAATAAATTTCTGGCTCGTTTT TTCTCCTCATGTGGAAGATGTTGTGCATCTATGCAATTTCTTTATTTGCATTTTGCAGATTCGATCTCTTCGAGCTCCAT ATCCACTGATACAAACAATAGTTCTTCGAAATGTACGCCATATTCGCCAAAGCAATAATTCTGTGATTCTTGTTTTAGAA AATTCTGTTCACGGCCTTTTTCCTGTTCCTCTTGGAGTCCAGGTATAGCAAATATTTCGATATGATAGATCTCCATGATG TGGTTCTATTTTTGGATTCTCGTGCAAATGAGAAAACTGTGAAACACTTTGCTTCCTTTTGCATTTCTTGGTTATCTAAT ACTATTCTTAAATTGCAATGTTTAATTGTTAGATTATAAGTTCAGAATTTTACTATTCCATTGCAGATTGTACAATTAAC AGCTGCTGGTAACTTTGAAGAAGCCTTGTCATTGTGCAAGCTCCTTCCACCTGAAGATTCAAATCTTCGTGCTGCAAAGG AGGGTTCAATTCATATAAGGTTCATTGTCATATAAGATAACTCCTGTTAAATAAATAGACTAGATAATTTTCCTCCTTTA TTTTAATTTTAAGTTTATCATATTTCTCAGAATCAATTAGCTGGAAGTCCAAGTTTGTATTTATGCTGAAGTCTTAATGT TAATTTCTCTGGGTTTTGGTGGATTTGGATCCTCTCATGTGTCTTTTTCACATGACCATGTCATGTTAACTAATCAGAAC CATTCATGATTTTTAATGAAATCATACGGTTAATATTCCTCCCTTATTTTTTTCACTTGCCCACATTATCCTACCATGTT CCCGCACATTTCCGCCTCTTCTTGCCCTGGTTCTGCGACCACGTTCAAGCACGTTCCTGCATCTTCTCCGGGTAACACGA AACTCCATTGCAATCCCTGTAAAATATGGTTCTCTTTTCCAGCCAATGCTTCTTTCTTCCCTCCTCGTCGAATTTCCCTC ATCGTGGAAACCCGTTGTTGATTGACTTTTTGTTGAACAAACCCCGTACCTTCCAATTCCAGAAAATATGCTGAACTGTG AAGGTTGAATGAAGCTCAACACCCAACATTAACATTCAATTCACGAATTCAACCAATCCTCACCACTTCTCTGCTCTTGA TCTTTTTCTTCACTGCTATTATTACTATTTTCAGAGATTTTCCTTAATTCACTTCCTTGTTCAATCAATCTTTCAACCTC TTCAAAAAAGCAGCTTTTATTTTATATCTTTCGAATCCCAATAACCTTCTTTCCGATAAGTCTAAAGTTTGTCTCTTGTA TTCGTTGGTTCATTCGTTTTATTGTTTCTCTAGGCTGAGAACAGAAGATGCAGCTTCTGTGTTTGTCCGACAGAGAAGAC GCAGGAACATTGTAGGATATCATGGGCAAGTTGAAAAATATGGGAGGAATATTAACCGTAGGATTTCATTAAAAATCATG AATGGTTCTGATTAGTTAACATGACATGGTCATGTGAAAAAGACACATGAGAGGATCCAAATCCGGTTTTGGTGTAAAAT GGTTGTAACCGGTGATAGTTATGCCTGAAAAATCAGCTCTCCTGGTGTTGACTAGGGCTTGAGATCAATATGATTATATA TCTTATCTTAATAACTAAACTTTCCTTGTAAAATTTACTCGTTAGCCTGCTTTCTCATATTAGTTTAGTTCTTGTCTGTA GTGCTTTTGTAGATAACCTATCATGTTAATAAATTTTATTGGTACCACTGGTCACTACTCCCACACTCGATCGAATATAA GACCATTTTAGTATATGCTTTTTTGATTGGTTGCTAGCAAAATATTGGTTCATGTATCGTATAACTTGGGCGTGGTTATA TGATGCATGGGAAATTCCTATATTTAAGAAGAAGAAAAAACAGTGTATATTGCGTTATTACTTATTACTGTCTAACTTCA TAGAAACTCTGAAAAATAATTTTATAATTTTATTTCTCTGTTAGTATCATATGTATTATTTCATAGTAGGTCACATAGTT AGTATATATAAATATCAGTCTTTATATTAAATATTCTTATAACTATTAGTAATATATAATTAATATAAATTAAAAACTTT TTGTAAGAAACGATAGATTTTGTTAAAGGGAAGTTATACTATCATGATACCATGCGTCAAGAAGTTAACAGTCCATGCTT CAACTTTACAGAGTTGCGAGTTTAACTAATATAAGGTCCTTTTGTATTTTCCTATAAAAAACTATCTATTATAGCCCTAG AATAACAGTATTTATATAATTAATGGACTATTAATGTGGATTACATAATGATGATGCCTACAACTACAATAATAATAGGA CTGCAGTAGTTAGTACAGATATTGTAAATTACGTAAGTCTTGACATGTTTATCATTGCTTATTTTGCATTTCACTCACTG GAAAGTTAAATGTGTTTCTCCTCTTTATGTTACAGATATGCCCACCATCTTTTTGACAATTGCAGCTATGAGGAGGCAAT GGAACATTTTCTCGAGTCTCAAGTAGATATAACTTATGTTCTTTCTCTCTATCCATCCATTATCCTTCCAAAGACAACTA TTGTTCATGAGCCGGAGAAGTTTATGGATATCTTTGAAGATGCTTTATGTCTCTCCCGAGGTTCTTCGACTATGTCAGAT GATATGGAACCCTCTCCAGCATCGCATATATCAGAATCTGATGAAAATGCAGAACTTGAGTCCAAAAAAATGAGCCATAA TATGCTTATGGCTCTCATAAAGTTTTTGCATAAGAAGAGATATAGTGTTATTGAGAAGGCCACTGCAGAGGGAACTGAGG AAGTTGTCTTAGATGCAGTTGGGGATAACTTCGCATCCTATAACAGTAGTAGGCATAAGAAAATAACCAAGGTATGAATA TTCTTGTGTGATCCTATTTCATGTCTAAAGTGTGGCGCATGCACCATTAGTATTTCTATTTATTTCCAATATGTATGATG CCAGTGCTTTGGGGTAGATTTACTAAAATTTACAGCTCATGCATTACAAAATGTAATTTTACATATTAAAATACTGCGGA TTTCTATAGTGTCTGCATGATTAATGTTGAAGCTCTGGGATGTATGATGTCCTCAAATCTTTTTGAAATATCAAAGTGAT GTAATAATAAGTGTTCATCACAGTTGTTATTGAAGAAGTTATGACTGCCGAAATTATTGGTGTCAGGGGCGTGGTAGTAC ATCTATTAGTTCAGGAGCTCGGGAGATGGCTTCAGTATTGGATACTGCTCTACTCCAGGCATTGCTGCTTACTGGACAAT CTTCTTTGGCTGAAGATTTACTTGGAGATCTTAATTACTGTGATTCGAAAATATGTGAAGAGATACTTAAAGAAGGTGGC TATCTTGTTGCTTTAGTAGAACTTTACAAGTGCAACTCAATGCACCGGGAAGCTCTGGAACTTGTTCATAAATTGGTTAA AGACGGCCAGTCTGAAATTGCACATAAGTTCAAGCCTGAGACCATCATTGAGTATCTCAAGGTGAACCCATATTTGATTG ACAATTTTGTCAACAAAGATTTTTCTTCTAATTCTTAATAGCTGTCATGCCTAAGTATTTGCTTCCTTATAACGGATTCT ACATAGTGCTTAGGAAGCAAGAGTGTCTTGATATACGACGTTATATTAACTGTAATCAGATATTAAGTGCACAGTGAATT TTGTATTTATTGTGGCTTAAAGGAAGGGATGCTTCTTTGCTTTATTTGGTGGTATTGATTAGATGGATTTTTTTTATCAA ACATTATTTGTTGATTAGCAGTTATAAAGTGGCAACTGAAAACAGTTATTGTAGAGGACTTTCTTAAGTTTATTGCCTAA TTTAGTCATTTTCCTCTTCTGACCTAGCTTGATTGGAAAAAGTTTGCAGCCACTTAGGAATTAATTAAAAATATTTATTC AGTTTCCATTATGCACGGTAAAATTTTCCTAAGATTCCCAATCCTCCTTAAAGTTGTTATTTATTTCCATTATGCAGTTA ACTTATACTAAGTTTTCTGATTTGGGGGGTTTCTGATGCAGCCGCTGTGTGAAACAGACCCCACACTTGTTCTTGAGTTG TCCATGCTTGTTCTTGAAAGCAACCCAACCCAAACTATTGAGCTCTTTCTATCCGGAAATATTCCAGCACATATGGTGAA CTCATATTTGAAGCAACATGCTCCCAACTTGCAAGCCACATACTTGGAGCTCATGCTTGCAATGAATGAGGACGCTGTAT CTGGAAATTTGCAAAATGAAATGGTGAGGACCTCTAGCATCTCATAAATGGCTCTAAGGACTAAAGCAGTTCTACTTTGT CATGATCTGATATATGATTAGAAGAAAATCCTCTACTCACTTGCTGTATTCTGCAATGTAGGTACAAGTCTATCTTTCTG AAGTACTTGATTGGCAGGCTGATTTAAGTTCCCAGGGGAAATGGGACGAGAAAGTTTACTCCCCCAAAAGAAATAAGTTA TTGTCTGCCTTAGAGAGCATGTCAGGATACAACCCAGAGGCTCTGCTGAAACGTCTTCCATCAGATGCTTTATATGAAGA GCGTGCAATATTGTTGGGAAAAATGAACCAACATGAACTAACATTATCTTTGTATGTTCATAAGGTATATCAAGTAAACA TCATCCTGTATTTACTGTGTAAAGGAAGTACAATTGTGTTGTCATATCTGATAACCCAAATGCATTTTGATTGCTCATGC ACATTATGTTATATAAATCAAAGTTTTATTTGTGAATCTTGTGGGAATAAGTGAATGCCCTCTTCATTTGTAGCTTCATG TTCCAGAACTGGCATTGTCTTATTGTGATCGGGTGTATGGATCTACGCATAAGCCTTCTGTAACATCTCCCAGCAACATA TACCTAATGCTTTTGCAAATTTATTTGAATCCACGGAGGACGACCAAGAATTATGAAAAGAGAATCACAAATCTATTATC CCCCAGGAGTACAACCCTTCCAAGAGCTAATTCAAAAATCTTATTAAAAACTAGAAGTCGAGGATCAAAGAAAATTGCTT CAATAGATGTTGCTGAGGACATAAAAGCTAGTTTGAGTAGCACGGACAGTAGCAAGAGTGATGCTGACACAGATGAATTT CCCGAAGGAGGTACTTCTATCATGCTTGATGAGGCCATTGATTTGTTGAGCCGCAGGTGGGATAGAATCAATGGAGCCCA GGCACTTAAACTTTTACCTAAGGAAACTAAACTTCAGTTATGATTTGGAAATAAATTTCAAAGAACCCCTTTTCTTTCTT TACATTTTCAAGGGAAAGGAAGGGGTGGAACTGTCATATTGTTTCGTTGAAGACATATCTAATGCAATACTATATTTGAC TTGGCTTGTTGATGATCACATGGGCTACTAATTCTTGATCATTTTGCCTATTCTTGACGTTGGACCATACGTAGATAACA TGCTGACACTTGTTTTTATTTGGTTGAACTGCACTTACTGGAGTCTGTTCTGTTGGGAGATGTTTTTATTTGTTATGAGA CATTTATTTTGTTTTTTAATTTATTCAATTTAGTAAACAATTGAATGTTATCTGCAGAACTTGCTTTCATTTCTTGGACC CCTTCTGAGAAAATCTAGTGAAATGTATCGTAATTGCTCGGTGGTCCAGAGCTTGAGACAGAGTGAGAACCTTCAGGTAA GCAAACATCAGAAATCAGGATTTTGCTTACTATTGTAGGAGAAATTGGTAGGTTAGGCCTTTTGGGCTATATTGGAAACA TGCTAATTTCTTACTTCTGAATCAATTTATTGAACATTATGCTTGTTTTACTACTCCCTTCGTTTTACTTCGTTTTATTC TCATCTGAAGCAGTCTTTTTATTAAAATTATATTAATTTTCTATTATGTTCTTTATATCTTTAATAAATTATTTTTATAT ATTTTCCCAAAAATTAATTAATTAGGTGAAGATAAGAATATTATTGATTAAATATTAATTAGTATGATTTTGAACTTATA AAACGATAGAAAAATAGGAACAAAAATTTCCTTGAAACCGACATTTGAAAAGGATGGAAATTGGAAGGACATTCTTTTTT CACGGACTAAGGAAATACAACGTGAGAGACAGAGGACCATATCTCTTGCATATTCATATGCTTCTCTTTTCTTACCTTGT CCACATATTTATCATTATTCAATTTGCTTGCATAGGTGAAAGATGAACTCTACAATAAGAGAAAAACAGTTGTGAAGATT ACCGGTGATGACATGTGTTCCTTGTGCCATAAGAAAATAGGGACTAGTGTTTTTGCAATCTACCCGAATGGGAAAACTCT AGTGCATTTTGTCTGCTTCCGAGATTCTCAAAGTATGAAAGCTGTAGCCAAAGGGTCTCCATTGAGAAAACCATTTTGAA AATGGGACTGAAAAAGCGCTACCAGCTGATGGTTGTGCGATCATTGCTTTACAGTGGCACGTCGATGGATTGTGATGAAA GCAACACTATGATTTATCTTCCGGAGATCAGTTTGGATGAGTTTCTAGGCGTGGTATGTTTCTTTTGTTTTCTTGTAATG TAAATATTGGTTTGTATTTTGGTTAAATTTGTTAAGCATTGAAAGGGAGCAAGTTTTTTTCCCTCCCTTTCCCATTTTTT GTTTCTGGAAATATTGTAATAAGGAAGTTAACCTGCGTTTTAGCATTTGAATGTGGATTCTCCACAACAAAGATTCTCTA CAGTTGTCTTCTAAAACAATTACAGACCATTGGTTTTTAATTTTTTATAATCAATGACTAAG
CDS sequence (LotjaGi1g1v0416300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGCACAGCGCCTACGATTCCTTCGAGCTCCTCACCGATTGCCCTTCGAAGATCGAATCCGTCGAACCGTACGGTTC CAAAATCCTCCTCGGATGCGCCGACGGCTCCCTCCAAATCTACGCGCCGGCGACGGCGGAGGAGGAGGAGGAGGAGCTGC GGAAGGAGGCTTACGCGCTTGAGAGAAGCGTGACCGGCTTCGCGAAGAAGCCTGTGGTGTCAATGCAGGTTGTGGAATCG AGAGAGATGCTCCTCTCGCTCTCAGAATCCATCGCGTTTCACAGGCTTTCCACGTTTGAAACCATTGCTGTCATCACCAA GGCCAAGGGCGCACATGCCTTCTGCTGGGATGAACGCAGAGGCTTCTTGTGCTTCGCCAGGCAGAAGCGGCTCTGTATCT TCCGACATGACGGTGGTAGAGGATTTGTGGAGGTGAAAGACTTTGGTGTTCCTGATGTGGTGAAGTCGATGTGTTGGTGC GGTGAGAATGTATGCTTGGGCATCAGGAAAGAGTATATGATTCTGAATGCCACGAATGGTGCACTGTCTGAGGTTTTTAC TTCCGGGAGGATAGCACCGCCTTTAGTTGTCTCGCTTCCTTATGGTGAACTTCTTCTTGGCAAGGAGAACATTGGCGTCA TTGTGGACCAAAATGGAAAACTTCGTCCAGAAGGTAGGATTTGTTGGTCAGAGGCCCCAGCAGAAGTTGTAATACCGAAG CCATATGCTATAGCACTGCTGCCTAGATTTGTGGAGATTCGATCTCTTCGAGCTCCATATCCACTGATACAAACAATAGT TCTTCGAAATGTACGCCATATTCGCCAAAGCAATAATTCTGTGATTCTTGTTTTAGAAAATTCTGTTCACGGCCTTTTTC CTGTTCCTCTTGGAGTCCAGATTGTACAATTAACAGCTGCTGGTAACTTTGAAGAAGCCTTGTCATTGTGCAAGCTCCTT CCACCTGAAGATTCAAATCTTCGTGCTGCAAAGGAGGGTTCAATTCATATAAGATATGCCCACCATCTTTTTGACAATTG CAGCTATGAGGAGGCAATGGAACATTTTCTCGAGTCTCAAGTAGATATAACTTATGTTCTTTCTCTCTATCCATCCATTA TCCTTCCAAAGACAACTATTGTTCATGAGCCGGAGAAGTTTATGGATATCTTTGAAGATGCTTTATGTCTCTCCCGAGGT TCTTCGACTATGTCAGATGATATGGAACCCTCTCCAGCATCGCATATATCAGAATCTGATGAAAATGCAGAACTTGAGTC CAAAAAAATGAGCCATAATATGCTTATGGCTCTCATAAAGTTTTTGCATAAGAAGAGATATAGTGTTATTGAGAAGGCCA CTGCAGAGGGAACTGAGGAAGTTGTCTTAGATGCAGTTGGGGATAACTTCGCATCCTATAACAGTAGTAGGCATAAGAAA ATAACCAAGGGGCGTGGTAGTACATCTATTAGTTCAGGAGCTCGGGAGATGGCTTCAGTATTGGATACTGCTCTACTCCA GGCATTGCTGCTTACTGGACAATCTTCTTTGGCTGAAGATTTACTTGGAGATCTTAATTACTGTGATTCGAAAATATGTG AAGAGATACTTAAAGAAGGTGGCTATCTTGTTGCTTTAGTAGAACTTTACAAGTGCAACTCAATGCACCGGGAAGCTCTG GAACTTGTTCATAAATTGGTTAAAGACGGCCAGTCTGAAATTGCACATAAGTTCAAGCCTGAGACCATCATTGAGTATCT CAAGCCGCTGTGTGAAACAGACCCCACACTTGTTCTTGAGTTGTCCATGCTTGTTCTTGAAAGCAACCCAACCCAAACTA TTGAGCTCTTTCTATCCGGAAATATTCCAGCACATATGGTGAACTCATATTTGAAGCAACATGCTCCCAACTTGCAAGCC ACATACTTGGAGCTCATGCTTGCAATGAATGAGGACGCTGTATCTGGAAATTTGCAAAATGAAATGGTACAAGTCTATCT TTCTGAAGTACTTGATTGGCAGGCTGATTTAAGTTCCCAGGGGAAATGGGACGAGAAAGTTTACTCCCCCAAAAGAAATA AGTTATTGTCTGCCTTAGAGAGCATGTCAGGATACAACCCAGAGGCTCTGCTGAAACGTCTTCCATCAGATGCTTTATAT GAAGAGCGTGCAATATTGTTGGGAAAAATGAACCAACATGAACTAACATTATCTTTGTATGTTCATAAGCTTCATGTTCC AGAACTGGCATTGTCTTATTGTGATCGGGTGTATGGATCTACGCATAAGCCTTCTGTAACATCTCCCAGCAACATATACC TAATGCTTTTGCAAATTTATTTGAATCCACGGAGGACGACCAAGAATTATGAAAAGAGAATCACAAATCTATTATCCCCC AGGAGTACAACCCTTCCAAGAGCTAATTCAAAAATCTTATTAAAAACTAGAAGTCGAGGATCAAAGAAAATTGCTTCAAT AGATGTTGCTGAGGACATAAAAGCTAGTTTGAGTAGCACGGACAGTAGCAAGAGTGATGCTGACACAGATGAATTTCCCG AAGGAGGTACTTCTATCATGCTTGATGAGGCCATTGATTTGTTGAGCCGCAGGTGGGATAGAATCAATGGAGCCCAGGCA CTTAAACTTTTACCTAAGGAAACTAAACTTCAGTTATGA
Protein sequence (LotjaGi1g1v0416300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVHSAYDSFELLTDCPSKIESVEPYGSKILLGCADGSLQIYAPATAEEEEEELRKEAYALERSVTGFAKKPVVSMQVVES REMLLSLSESIAFHRLSTFETIAVITKAKGAHAFCWDERRGFLCFARQKRLCIFRHDGGRGFVEVKDFGVPDVVKSMCWC GENVCLGIRKEYMILNATNGALSEVFTSGRIAPPLVVSLPYGELLLGKENIGVIVDQNGKLRPEGRICWSEAPAEVVIPK PYAIALLPRFVEIRSLRAPYPLIQTIVLRNVRHIRQSNNSVILVLENSVHGLFPVPLGVQIVQLTAAGNFEEALSLCKLL PPEDSNLRAAKEGSIHIRYAHHLFDNCSYEEAMEHFLESQVDITYVLSLYPSIILPKTTIVHEPEKFMDIFEDALCLSRG SSTMSDDMEPSPASHISESDENAELESKKMSHNMLMALIKFLHKKRYSVIEKATAEGTEEVVLDAVGDNFASYNSSRHKK ITKGRGSTSISSGAREMASVLDTALLQALLLTGQSSLAEDLLGDLNYCDSKICEEILKEGGYLVALVELYKCNSMHREAL ELVHKLVKDGQSEIAHKFKPETIIEYLKPLCETDPTLVLELSMLVLESNPTQTIELFLSGNIPAHMVNSYLKQHAPNLQA TYLELMLAMNEDAVSGNLQNEMVQVYLSEVLDWQADLSSQGKWDEKVYSPKRNKLLSALESMSGYNPEALLKRLPSDALY EERAILLGKMNQHELTLSLYVHKLHVPELALSYCDRVYGSTHKPSVTSPSNIYLMLLQIYLNPRRTTKNYEKRITNLLSP RSTTLPRANSKILLKTRSRGSKKIASIDVAEDIKASLSSTDSSKSDADTDEFPEGGTSIMLDEAIDLLSRRWDRINGAQA LKLLPKETKLQL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 891 | 891 | 1.9E-246 | – | |
| PANTHER | 1 | 891 | 891 | 1.9E-246 | ||
| ProSiteProfiles | 16 | 281 | 266 | 21.651 | ||
| SUPERFAMILY | 24 | 168 | 145 | 6.32E-5 | ||
| Pfam | 67 | 274 | 208 | 2.1E-21 | ||
| MobiDBLite | 401 | 425 | 25 | - | – | |
| MobiDBLite | 401 | 418 | 18 | - | – | |
| Pfam | 501 | 606 | 106 | 1.7E-23 | ||
| ProSiteProfiles | 601 | 788 | 188 | 13.839 | ||
| Pfam | 627 | 756 | 130 | 2.1E-7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Intracellular protein transport | The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell. | ||
| Biological process | Vesicle-mediated transport | A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane. |
Expression pattern of LotjaGi1g1v0416300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…