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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0259479 |
| Transcript ID | Lj0g3v0259479.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: vam6/Vps39-like protein-like isoform X2 [Cicer arietinum] gi|502153212|ref|XP_004509258.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 309 | 309 | 1.00E-194 | – | |
| ProSiteProfiles | 1 | 125 | 125 | 12.174 | ||
| PANTHER | 1 | 309 | 309 | 1.00E-194 | ||
| Pfam | 4 | 118 | 115 | 2.00E-13 | ||
| MobiDBLite | 245 | 269 | 25 | – | – | |
| PANTHER | 326 | 588 | 263 | 1.00E-194 | – | |
| PANTHER | 326 | 588 | 263 | 1.00E-194 | ||
| Pfam | 345 | 450 | 106 | 1.20E-23 | ||
| ProSiteProfiles | 445 | 636 | 192 | 10.547 | ||
| Pfam | 471 | 590 | 120 | 2.70E-06 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Intracellular protein transport | The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell. | ||
| Biological process | Vesicle-mediated transport | A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane. |
Expression pattern of Lj0g3v0259479.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0259479.1, powered by CORGI.
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