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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1757300 |
| Transcript ID | Lj2g3v1757300.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: vam6/Vps39-like protein-like [Glycine max] gi|356496767|ref|XP_003517237.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 785 | 785 | 0 | – | |
| PANTHER | 1 | 785 | 785 | 0 | ||
| SUPERFAMILY | 15 | 202 | 188 | 5.76E-07 | ||
| ProSiteProfiles | 16 | 278 | 263 | 23.643 | ||
| Gene3D | 26 | 157 | 132 | 4.70E-04 | ||
| Pfam | 58 | 274 | 217 | 1.80E-23 | ||
| MobiDBLite | 397 | 419 | 23 | – | – | |
| Pfam | 495 | 603 | 109 | 8.50E-26 | ||
| ProSiteProfiles | 598 | 785 | 188 | 12.139 | ||
| Pfam | 623 | 753 | 131 | 2.90E-07 | ||
| MobiDBLite | 798 | 847 | 50 | – | – | |
| PANTHER | 849 | 989 | 141 | 0 | – | |
| PANTHER | 849 | 989 | 141 | 0 | ||
| Pfam | 863 | 971 | 109 | 4.60E-32 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Intracellular protein transport | The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell. | ||
| Biological process | Vesicle-mediated transport | A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane. |
Expression pattern of Lj2g3v1757300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1757300.1, powered by CORGI.
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