Domain Predictions — View

Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

PF00780

Source: Pfam

Description

CNH domain

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 7

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0259479.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: vam6/Vps39-like protein-like isoform X2 [Cicer arietinum] gi\|502153212\|ref\|XP_004509258.1\|	Domains IPR000547 IPR001180 IPR019452 IPR032914 PF00637 PF00780 PF10366 PS50219 PS50236 PTHR12894 PTHR12894:SF10 mobidb-lite	12
Lj2g3v1757300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: vam6/Vps39-like protein-like [Glycine max] gi\|356496767\|ref\|XP_003517237.1\|	Domains G3DSA:2.130.10.10 IPR000547 IPR001180 IPR015943 IPR017986 IPR019452 IPR019453 IPR032914 PF00637 PF00780 PF10366 PF10367 PS50219 PS50236 PTHR12894 PTHR12894:SF10 SSF50978 mobidb-lite	18
Lj3g3v0718650.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: transforming growth factor-beta receptor-associated protein 1 homolog isoform X1 [Cicer arietinum] gi\|502155930\|ref\|XP_004510242.1\|	Domains IPR000547 IPR001180 IPR019452 IPR019453 PF00637 PF00780 PF10366 PF10367 PS50219 PTHR12894 PTHR12894:SF17	11
LotjaGi1g1v0416300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Vam6/Vps39-like protein; TAIR: AT4G36630.2 Vacuolar sorting protein 39; Swiss-Prot: sp\|Q8R5L3\|VPS39_MOUSE Vam6/Vps39-like protein; TrEMBL-Plants: tr\|G7LES7\|G7LES7_MEDTR Vam6/Vps39-like protein; Found in the gene: LotjaGi1g1v0416300	Domains IPR000547 IPR001180 IPR019452 IPR032914 IPR036322 PF00637 PF00780 PF10366 PS50219 PS50236 PTHR12894 PTHR12894:SF27 SSF50978 mobidb-lite	14
LotjaGi2g1v0390200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Vam6/Vps39-like protein; TAIR: AT4G36630.1 Vacuolar sorting protein 39; Swiss-Prot: sp\|Q96JC1\|VPS39_HUMAN Vam6/Vps39-like protein; TrEMBL-Plants: tr\|A0A0R0LJG6\|A0A0R0LJG6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0390200	Domains IPR000547 IPR001180 IPR019452 IPR019453 IPR032914 IPR036322 PF00637 PF00780 PF10366 PF10367 PS50219 PS50236 PTHR12894 PTHR12894:SF27 SSF50978 mobidb-lite	16
LotjaGi2g1v0390200.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Vam6/Vps39-like protein; TAIR: AT4G36630.1 Vacuolar sorting protein 39; Swiss-Prot: sp\|Q96JC1\|VPS39_HUMAN Vam6/Vps39-like protein; TrEMBL-Plants: tr\|A0A0R0LJG6\|A0A0R0LJG6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0390200	Domains IPR000547 IPR001180 IPR019452 IPR019453 IPR032914 IPR036322 PF00637 PF00780 PF10366 PF10367 PS50219 PS50236 PTHR12894 PTHR12894:SF27 SSF50978 mobidb-lite	16
LotjaGi4g1v0117000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Vam6/Vps39-like protein; TAIR: AT4G36630.1 Vacuolar sorting protein 39; Swiss-Prot: sp\|Q8R5L3\|VPS39_MOUSE Vam6/Vps39-like protein; TrEMBL-Plants: tr\|G7LES7\|G7LES7_MEDTR Vam6/Vps39-like protein; Found in the gene: LotjaGi4g1v0117000	Domains IPR000547 IPR001180 IPR019452 IPR019453 IPR032914 IPR036322 PF00637 PF00780 PF10366 PF10367 PS50219 PS50236 PTHR12894 PTHR12894:SF27 SSF50978 mobidb-lite	16

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	14.29