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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001790
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 12 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.642s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0105109.1
n.a. PREDICTED: 50S ribosomal protein L10, chloroplastic-like [Cicer arietinum] gi|502149927|ref|XP_004507713.1| chr0 45078384 45079842 -
2 domain predictions
1 GO term
Lj0g3v0246409.1
n.a. PREDICTED: 60S acidic ribosomal protein P0-like [Cicer arietinum] gi|502097328|ref|XP_004490967.1| chr0 127676811 127677735 +
2 domain predictions
1 GO term
Lj0g3v0303829.1
n.a. PREDICTED: mRNA turnover protein 4 homolog [Cicer arietinum] gi|502076993|ref|XP_004485517.1| chr0 158244886 158246920 +
2 domain predictions
1 GO term
Lj0g3v0361259.1
n.a. PREDICTED: 60S acidic ribosomal protein P0-like [Glycine max] gi|356501137|ref|XP_003519385.1| chr0 190287864 190289469 -
2 domain predictions
1 GO term
Lj3g3v2985020.1
n.a. 60S acidic ribosomal protein PO [Euphorbia esula] gi|6984134|gb|AAF34767.1|AF227622_1 chr3 36937364 36940389 -
2 domain predictions
1 GO term
Lj4g3v1389230.1
n.a. PREDICTED: 60S acidic ribosomal protein P0-like [Glycine max] gi|356501137|ref|XP_003519385.1| chr4 21642515 21643904 +
2 domain predictions
1 GO term
LotjaGi1g1v0079400.1
n.a. 60S acidic ribosomal protein P0; TAIR: AT2G40010.1 Ribosomal protein L10 family protein; Swiss-Prot: sp|P50346|RLA0_SOYBN 60S acidic ribosomal protein P0; TrEMBL-Plants: tr|I3SXM4|I3SXM4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0079400 LjG1.1_chr1 11472664 11474478 +
2 domain predictions
1 GO term
LotjaGi1g1v0079600.1
n.a. 60S acidic ribosomal protein P0; TAIR: AT2G40010.1 Ribosomal protein L10 family protein; Swiss-Prot: sp|P50346|RLA0_SOYBN 60S acidic ribosomal protein P0; TrEMBL-Plants: tr|I3SER8|I3SER8_LOTJA 60S acidic ribosomal protein P0; Found in the gene: LotjaGi1g1v0079600 LjG1.1_chr1 11490082 11493619 +
2 domain predictions
1 GO term
LotjaGi4g1v0225000.1
n.a. 60S acidic ribosomal protein P0; TAIR: AT2G40010.1 Ribosomal protein L10 family protein; Swiss-Prot: sp|P50346|RLA0_SOYBN 60S acidic ribosomal protein P0; TrEMBL-Plants: tr|I3SXM4|I3SXM4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0225000 LjG1.1_chr4 53063646 53065979 +
2 domain predictions
1 GO term
LotjaGi4g1v0225000.2
n.a. 60S acidic ribosomal protein P0; TAIR: AT2G40010.1 Ribosomal protein L10 family protein; Swiss-Prot: sp|P50346|RLA0_SOYBN 60S acidic ribosomal protein P0; TrEMBL-Plants: tr|I3SXM4|I3SXM4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0225000 LjG1.1_chr4 53064364 53064927 +
2 domain predictions
1 GO term
LotjaGi4g1v0285600.1
n.a. 50S ribosomal protein L10; TAIR: AT5G13510.1 Ribosomal protein L10 family protein; Swiss-Prot: sp|O80362|RK10_TOBAC 50S ribosomal protein L10, chloroplastic; TrEMBL-Plants: tr|A0A1J7HDS5|A0A1J7HDS5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0285600 LjG1.1_chr4 65798637 65803214 -
4 domain predictions
1 GO term
LotjaGi6g1v0358000.1
n.a. 60S acidic ribosomal protein P0; TAIR: AT1G25260.1 Ribosomal protein L10 family protein; Swiss-Prot: sp|A4FV84|MRT4_BOVIN mRNA turnover protein 4 homolog; TrEMBL-Plants: tr|I3S103|I3S103_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0358000 LjG1.1_chr6 67000738 67003926 +
2 domain predictions
1 GO term