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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR003172
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 16 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.999s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0190389.1
n.a. PREDICTED: phosphatidylglycerol/phosphatidylinositol transfer protein-like [Glycine max] gi|356542064|ref|XP_003539491.1| chr0 93059246 93061329 -
3 domain predictions
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Lj2g3v2901270.1
n.a. PREDICTED: phosphatidylglycerol/phosphatidylinositol transfer protein-like [Cicer arietinum] gi|502097992|ref|XP_004491129.1| chr2 37717911 37722952 +
3 domain predictions
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Lj2g3v2901270.2
n.a. PREDICTED: phosphatidylglycerol/phosphatidylinositol transfer protein-like [Cicer arietinum] gi|502097992|ref|XP_004491129.1| chr2 37717911 37728365 +
2 domain predictions
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Lj3g3v1295720.1
n.a. PREDICTED: phosphatidylglycerol/phosphatidylinositol transfer protein-like [Glycine max] gi|356542064|ref|XP_003539491.1| chr3 16567074 16569157 +
3 domain predictions
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Lj3g3v2927360.1
n.a. PREDICTED: phosphatidylglycerol/phosphatidylinositol transfer protein-like [Cicer arietinum] gi|502145928|ref|XP_004506242.1| chr3 36583609 36587934 -
4 domain predictions
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Lj5g3v0841320.1
n.a. phosphatidylglycerol/phosphatidylinositol transfer protein precursor [Camellia sinensis] gi|330318646|gb|AEC10983.1| chr5 12174005 12176079 +
3 domain predictions
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LotjaGi1g1v0063300.1
n.a. Phosphatidylglycerol/phosphatidylinositol transfer protein; TAIR: AT3G11780.1 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein; Swiss-Prot: sp|Q54SW1|Y2179_DICDI Putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179; TrEMBL-Plants: tr|I3SDT8|I3SDT8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0063300 LjG1.1_chr1 8780261 8783560 -
3 domain predictions
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LotjaGi1g1v0064600.1
n.a. MD-2-related lipid recognition domain-containing protein / ML domain-containing protein; TAIR: AT3G11780.1 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein; Swiss-Prot: sp|Q54SW1|Y2179_DICDI Putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179; TrEMBL-Plants: tr|I3T113|I3T113_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0064600 LjG1.1_chr1 8958129 8972428 -
3 domain predictions
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LotjaGi1g1v0064600.2
n.a. MD-2-related lipid recognition domain-containing protein / ML domain-containing protein; TAIR: AT3G11780.1 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein; Swiss-Prot: sp|Q54SW1|Y2179_DICDI Putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179; TrEMBL-Plants: tr|I3T113|I3T113_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0064600 LjG1.1_chr1 8959052 8972365 -
3 domain predictions
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LotjaGi1g1v0064600.3
n.a. MD-2-related lipid recognition domain-containing protein / ML domain-containing protein; TAIR: AT3G11780.1 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein; Swiss-Prot: sp|Q54SW1|Y2179_DICDI Putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179; TrEMBL-Plants: tr|I3T113|I3T113_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0064600 LjG1.1_chr1 8959052 8972365 -
3 domain predictions
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LotjaGi1g1v0064600.4
n.a. MD-2-related lipid recognition domain-containing protein / ML domain-containing protein; TAIR: AT3G11780.2 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein; Swiss-Prot: sp|Q54SW1|Y2179_DICDI Putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179; TrEMBL-Plants: tr|I3T113|I3T113_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0064600 LjG1.1_chr1 8959080 8972358 -
3 domain predictions
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LotjaGi1g1v0064700.1
n.a. Phosphatidylglycerol/phosphatidylinositol transfer protein; TAIR: AT3G11780.1 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein; Swiss-Prot: sp|Q54SW1|Y2179_DICDI Putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179; TrEMBL-Plants: tr|I3SDT8|I3SDT8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0064700 LjG1.1_chr1 8974642 8981648 -
3 domain predictions
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LotjaGi3g1v0184400.1
n.a. Phosphatidylglycerol/phosphatidylinositol transfer protein; TAIR: AT3G11780.1 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein; Swiss-Prot: sp|Q54SW1|Y2179_DICDI Putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179; TrEMBL-Plants: tr|C6TFA8|C6TFA8_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0184400 LjG1.1_chr3 25811045 25814213 +
3 domain predictions
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LotjaGi3g1v0470600.1
n.a. MD-2-related lipid recognition domain-containing protein / ML domain-containing protein; TAIR: AT3G44100.1 MD-2-related lipid recognition domain-containing protein; Swiss-Prot: sp|D4AYQ6|NPC2_ARTBC Phosphatidylglycerol/phosphatidylinositol transfer protein; TrEMBL-Plants: tr|I3SA64|I3SA64_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0470600 LjG1.1_chr3 88612231 88617500 -
3 domain predictions
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LotjaGi5g1v0107000.1
n.a. MD-2-related lipid recognition domain-containing protein / ML domain-containing protein; TAIR: AT3G11780.1 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein; Swiss-Prot: sp|Q54SW1|Y2179_DICDI Putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179; TrEMBL-Plants: tr|I3T0S6|I3T0S6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0107000 LjG1.1_chr5 20262269 20267087 +
3 domain predictions
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LotjaGi5g1v0107000.2
n.a. MD-2-related lipid recognition domain-containing protein / ML domain-containing protein; TAIR: AT3G11780.1 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein; Swiss-Prot: sp|Q54SW1|Y2179_DICDI Putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179; TrEMBL-Plants: tr|I3SG86|I3SG86_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0107000 LjG1.1_chr5 20264226 20266647 +
3 domain predictions
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