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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR004403
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 17 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.012s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0130059.1
n.a. PREDICTED: eukaryotic peptide chain release factor subunit 1-3-like [Glycine max] gi|356560043|ref|XP_003548305.1| chr0 58923174 58926166 -
2 domain predictions
2 GO terms
Lj0g3v0340599.1
n.a. PREDICTED: eukaryotic peptide chain release factor subunit 1-3 [Vitis vinifera] gi|225460446|ref|XP_002271656.1| chr0 178413447 178415601 +
3 domain predictions
2 GO terms
Lj1g3v3943750.1
n.a. PREDICTED: eukaryotic peptide chain release factor subunit 1-3-like [Cicer arietinum] gi|502106984|ref|XP_004493119.1| chr1 46036740 46040354 -
3 domain predictions
2 GO terms
Lj2g3v0621310.1
n.a. PREDICTED: eukaryotic peptide chain release factor subunit 1-3-like [Glycine max] gi|356531058|ref|XP_003534095.1| chr2 8540159 8544802 -
3 domain predictions
2 GO terms
Lj2g3v0808900.1
n.a. PREDICTED: eukaryotic peptide chain release factor subunit 1-3-like [Glycine max] gi|356559518|ref|XP_003548046.1| chr2 12672104 12672337 -
2 domain predictions
2 GO terms
LotjaGi1g1v0637500.1
n.a. Eukaryotic peptide chain release factor subunit 1-1; TAIR: AT3G26618.1 eukaryotic release factor 1-3; Swiss-Prot: sp|P35614|ERF1Z_ARATH Eukaryotic peptide chain release factor subunit 1-3; TrEMBL-Plants: tr|I3T2R1|I3T2R1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0637500 LjG1.1_chr1 119264989 119268241 -
3 domain predictions
2 GO terms
LotjaGi1g1v0637500.2
n.a. Eukaryotic peptide chain release factor subunit 1-1; TAIR: AT3G26618.1 eukaryotic release factor 1-3; Swiss-Prot: sp|P35614|ERF1Z_ARATH Eukaryotic peptide chain release factor subunit 1-3; TrEMBL-Plants: tr|I3T2R1|I3T2R1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0637500 LjG1.1_chr1 119265531 119266867 -
3 domain predictions
2 GO terms
LotjaGi1g1v0637500.3
n.a. Eukaryotic peptide chain release factor subunit 1-1; TAIR: AT3G26618.1 eukaryotic release factor 1-3; Swiss-Prot: sp|P35614|ERF1Z_ARATH Eukaryotic peptide chain release factor subunit 1-3; TrEMBL-Plants: tr|I3T2R1|I3T2R1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0637500 LjG1.1_chr1 119265531 119267121 -
3 domain predictions
2 GO terms
LotjaGi1g1v0637500.4
n.a. Eukaryotic peptide chain release factor subunit 1-1; TAIR: AT3G26618.1 eukaryotic release factor 1-3; Swiss-Prot: sp|P35614|ERF1Z_ARATH Eukaryotic peptide chain release factor subunit 1-3; TrEMBL-Plants: tr|I3T2R1|I3T2R1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0637500 LjG1.1_chr1 119265531 119267123 -
3 domain predictions
2 GO terms
LotjaGi2g1v0182000.1
n.a. Eukaryotic peptide chain release factor subunit 1-1; TAIR: AT3G26618.1 eukaryotic release factor 1-3; Swiss-Prot: sp|P35614|ERF1Z_ARATH Eukaryotic peptide chain release factor subunit 1-3; TrEMBL-Plants: tr|I1L3W8|I1L3W8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0182000 LjG1.1_chr2 60459124 60464101 -
3 domain predictions
2 GO terms
LotjaGi2g1v0182000.2
n.a. Eukaryotic peptide chain release factor subunit 1-1; TAIR: AT3G26618.1 eukaryotic release factor 1-3; Swiss-Prot: sp|P35614|ERF1Z_ARATH Eukaryotic peptide chain release factor subunit 1-3; TrEMBL-Plants: tr|I1L3W8|I1L3W8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0182000 LjG1.1_chr2 60461751 60463226 -
3 domain predictions
2 GO terms
LotjaGi2g1v0182000.3
n.a. Eukaryotic peptide chain release factor subunit 1-1; TAIR: AT3G26618.1 eukaryotic release factor 1-3; Swiss-Prot: sp|P35614|ERF1Z_ARATH Eukaryotic peptide chain release factor subunit 1-3; TrEMBL-Plants: tr|A0A0R0I9D1|A0A0R0I9D1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0182000 LjG1.1_chr2 60461751 60463357 -
3 domain predictions
2 GO terms
LotjaGi2g1v0218100.1
n.a. Eukaryotic peptide chain release factor subunit 1-1; TAIR: AT1G12920.1 eukaryotic release factor 1-2; Swiss-Prot: sp|Q9LPV8|ERF1Y_ARATH Eukaryotic peptide chain release factor subunit 1-2; TrEMBL-Plants: tr|F6I3Y5|F6I3Y5_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi2g1v0218100 LjG1.1_chr2 67277224 67279585 -
3 domain predictions
2 GO terms
LotjaGi5g1v0015400.1
n.a. Eukaryotic peptide chain release factor subunit 1-1; TAIR: AT3G26618.1 eukaryotic release factor 1-3; Swiss-Prot: sp|P35614|ERF1Z_ARATH Eukaryotic peptide chain release factor subunit 1-3; TrEMBL-Plants: tr|A0A0L9VIQ2|A0A0L9VIQ2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0015400 LjG1.1_chr5 3091524 3096161 +
3 domain predictions
2 GO terms
LotjaGi5g1v0015400.2
n.a. Eukaryotic peptide chain release factor subunit 1-1; TAIR: AT3G26618.1 eukaryotic release factor 1-3; Swiss-Prot: sp|P35614|ERF1Z_ARATH Eukaryotic peptide chain release factor subunit 1-3; TrEMBL-Plants: tr|A0A0L9VIQ2|A0A0L9VIQ2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0015400 LjG1.1_chr5 3091770 3093341 +
3 domain predictions
2 GO terms
LotjaGi5g1v0015400.3
n.a. Eukaryotic peptide chain release factor subunit 1-1; TAIR: AT3G26618.1 eukaryotic release factor 1-3; Swiss-Prot: sp|P35614|ERF1Z_ARATH Eukaryotic peptide chain release factor subunit 1-3; TrEMBL-Plants: tr|A0A0L9VIQ2|A0A0L9VIQ2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0015400 LjG1.1_chr5 3091831 3093341 +
3 domain predictions
2 GO terms
LotjaGi5g1v0015400.4
n.a. Eukaryotic peptide chain release factor subunit 1-1; TAIR: AT3G26618.1 eukaryotic release factor 1-3; Swiss-Prot: sp|P35614|ERF1Z_ARATH Eukaryotic peptide chain release factor subunit 1-3; TrEMBL-Plants: tr|A0A0L9VIQ2|A0A0L9VIQ2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0015400 LjG1.1_chr5 3092011 3093341 +
3 domain predictions
2 GO terms