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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0015400 |
| Transcript ID | LotjaGi5g1v0015400.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Eukaryotic peptide chain release factor subunit 1-1; TAIR: AT3G26618.1 eukaryotic release factor 1-3; Swiss-Prot: sp|P35614|ERF1Z_ARATH Eukaryotic peptide chain release factor subunit 1-3; TrEMBL-Plants: tr|A0A0L9VIQ2|A0A0L9VIQ2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0015400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:3091524..3096161) extracted from Lotus japonicus Gifu genome v1.2.
GCCCATACATAGCATGCGAGAGGCCCAATGCTAAAGTAAAAAACAATTTGACCGACGCCACCTCAATCCATTTCTACGCT GTTTTCCAAGACTCGACCCTCCGATCGATCGACATCACCGATTGTGCGTCGCCGTCGTATCGTATCTCTCAGGTAATCTC TCCTCCTCGCTCGCTGTGTTGTTTGCATCTCTTTTCCAGTATGGTGCTTGCTGGTTGATACTGATACTGATCATAGCATA GTTACCCTAATTCAGTATTCTCTTATTGTTCACTGTTGTTCTTGCTGGTTGGATCTTGTAGTTGTTGTTGGCATTTTATA TTTTAACCTAATGCTCATTCTTGTGTGTTGCATGTTTTTGTTGCTTACTTCATTGGATTGCTATATCTTTATGTTCAAGT GCATTCATTTTAATTGAATTATTTCCCCCCTGGTATTGATGTTTCATGTTTTACACTATTTTATTTTATTTAAAGGTTGT TGTTGGCTTATCGTCGTTTAAATAAATATGGCTGATGCTCATGACACTGATAAGAACATTGAGGTATGGAAAATCAAGAA ATTGATCAAGGCTCTTGAGGCTGCTAGAGGAAATGGGACCAGCATGATTTCCCTTATCATGCCTCCACGTGATCAAATTG CTCGTGTTACTAAGATGCTTGGTGATGAGTTTGGAACGGCTTCAAACATCAAAAGCAGGGTCAATCGACAGTCTGTGCTT GGTGCAATCACTTCTGCTCAGCAAAGGCTTAAGCTTTATAACAAGGTTCCTCCTAATGGGCTTGTTTTGTATACTGGAAC AATTGTCACTGAAGATGGGAAGGAAAAGAAGGTCACCTTTGATTTTGAGCCATTCAGACCAATCAACGCCTCTCTCTATC TTTGTGACAATAAGTTTCACACCGAAGCTTTGAACGAGCTCCTGGAATCTGATGACAAGTTTGGATTTATTATCATGGAT GGCAATGGCACTCTGTTTGGGACCTTGAGTGGTAATACAAGAGAGGTGCTTCATAAGTTTAGCGTGGATCTCCCAAAGAA ACATGGGCGAGGAGGGCAATCTGCTCTACGGTTTGCCCGTCTTCGTATGGAGAAGCGTCATAACTATGTGAGGAAGACTG CAGAGCTTGCCACCCAGTTTTATATCAACCCTGCTACCAGCCAGCCCAATGTTTCAGGATTAATACTTGCTGGTTCAGCT GATTTCAAAACTGAGCTTAGCCAGTCAGACATGTTTGATCCTCGACTTCAGGCAAAAATACTCAATGTTGTGGATGTATC TTATGGAGGGGAGAATGGGTTTAATCAGGCTATTGAACTGTCTGCTGAAATTCTGGCCAATGTAAAGTTTATTCAGGAGA AAAAATTGATTGGAAAGTACTTTGAGGAAATCAGCCAAGATACTGGAAAGTATGTTTTTGGTGTTGATGATACCCTTAAA GCTCTGGAGATGGGAGCTGTTGAGACACTTATTGTGTGGGAAAATCTGGATATGAATAGGTATGTCTTAAAAAACAGTGT TACCGGTGAGATTGTCATTAAGCACTATAACAAGGAAGAGGATGCCAACCAGAGCAATTTTAGGGATCCTGTTAGCTCTG CTGATTATGAGGTTCAGGAAAAGTTGTCTCTGTTGGAGTGGTTTGCAAATGAATACAGACGATTTGGTTGCACTCTTGAG TTTGTCACCAATAAATCACAAGAAGGTTCACAGTTTTGCAGAGGTTTTGGTGGGATAGGTGGTGTCTTGCGTTACCAGCT TGATATGAGAACATTTGATGATTTATCTGATGATGGGGGTGTATATGATTCTGAATAGCAATCAATGAAATGCTTCCTAC TGCTGGTGCAGGAAGGGAAGGTCATAATACCTGCACCAGTATGGGAGGTGGTTGCACGTGCTGCTGCTGCTCCTCCTCCA CGTCTGTCTGTAGTGTTGCATGAAAGGTTTGTTTGTGAACTGAGCTTCAATTTTATTACATTTTTTCTTTTATCTTTTCA AGCATAGGATTTACATTACATTTAGTGCTTACTTGTTTTGTTAGAAATTACTTCAAAGAACTTACAGTGAGTTTCTCAAA CTTTTTGTTTCAATATTGTTTCAGATGCTTTGCCCCAAAATTGCTTTCTGATATGAGTTGCTCTCTTGTTCTCATATCTT TCAATCTCTGGCACTACAAATTTCAGCAACATTGCTCGCAACAGCTGGTGAAAATCTCCTATTTCCTCTTATGTTTAAAT CTATTATTATAGTGGTCTTTCTTTCTTCACATATGCTTATGTTGGTCATTTTGTTGGTTTTTTTTTACCTTTTAGCTCCC CTGCGATCTGCTTGCACTCAGAAAGGCAAGAACAGAATTATGCTTCCCAAAGAAACACGAACTAGCGTCAATGAAGGTCA GTCCTCATTAATGAGCTAACACAGATCTATACATGTACTTTTTATTTCTTTTTATTTTATTTTCCAATTCAGCTTTTCTC AACAGCTCAAAAATAGAATTTAGCTGCTAGATGCGTTACCTGCTTTCAGTAGTATAGCTCATAGACTGGTTAGATGGATT TTTGTGTTCTTTTGATCTTTTCTAATACTCCCATAAGTATAGCTTCATTAATTGAAACACATCTTTCTCTGATCTAAGAA TTGATGAACCCACGTTTCTTCATATTTGTACATGTTTATACTTAATACCAATCTGTCTTGTCCTACATACTTACAACAAG AAATGAAAGATTCATTCTTCTATAGACTTAGTTGCAAACTTCTGACTGCTAAACTTAGATGGCAGTTTATATTCTATTGT GCTTCTTCGGGTGCTCTTTTTTTACATATCATGAAATTACAAACAAACTGAAAATTCTTCTGCATTGTAGTCTTTGTTGG TTCTGTCTATCTATGTAACCCAGCAAAGCTTTGATGAAGAGTACGCTCACCAAGTTATGCTGCCTAAGGTGCATTTTGCT GTTACCTCTTTCTATTGAACTGATGATTTTTAATGCTAATACAGCTCTTTATTATCACTGAATAGAAAATATTTGGTGTT TGATGGTCAACAATAGTAATTGTTTTCATAATTATAATCTGCAAGGAAAAGAAATTGTTTACAATTATAATGTTTTTCCT ATTGACACTGGTTTGAGTGGTTTCTACTAATCATAATGATGGTGATTCATTTTTATATCTATATATGATAATGTAAGCAA ATGACCATTTGCTTGTTAATAATGATTGGCTAGTGTTCTTTTGATTAGTTTATACCATGTTTGTTTATTTTCTATTCTTC TCACCGATGATGCACATCCATCCATTCCTTCTTTAATGATTGGCCCAGGCTTGCCAATCACGCCATTGCGCAGCGGAGCG GCCTTCAGCCGCTCGCTGAGCGTTTACAGCCGCAGCCATCGCAGCCGCTTTTTGGCCAGATTCACAGCCATGGCGGCGCT ATTTAGCAGCTTTAGGGATAGGGTTATTTCTTTTAAACGAAAGAGAAGGTCCCAGAAAGTAAAAAATCCCCTCAAAATTA GAATGTTAGGGCTATTAGTTGGGGGCATTTTTGCTTTTCGGTTCTATTAGTTAAGGTATTTTCGGATCTTATAATACTCA AGAGGCCTTGAAAGTTGAACTGAAAGTCTGTTTGGTGCTGCCCCCTTCAACCTTTCTTCTCCCTACTCCTGCGCGTCTGC CACTTGGACCACCTTCCAGCCATCTTCTGGTGACTTCTCCGGCATCCTCCTTCTTTTTCAGTGTAGCGGCCATTCTGCTA TTTGCTATACAGCTATAGCGTTTTTTGGGACGGTCGCAGATTGACAAGCCTGGATTGCCCTGTGTTCTCTTTAATTTTGT CCTGTGTTTGTTCGTTCATGTTATATTCTTCTTATCCGTGCATCATATTCATTTTACTTAGAGGCATTTTAACAGACAGA CGCTGCTAAGTTGAATAATTGCTTTACATGGTTTTGCAGGTGAATCCAGATATTTCAATAAACAGCTTTTCAAGGATGCT TTGAGCATATACATGACACTTGAGAGTGCTCGAGTCAGCGACTACATCTCTCGTGCCTTGATCATGCTTTTGGAACTTTC TTGTGTTAGACCAATGTTCTTATTTTCTTTGTTGCTTCTATTAAAAAGTAAAACTTATATTGGTTTATTGCTTAATGACG TGAGATTTAATGTTATGAAAACCTCAACTTGTTAGTATTAATTATATTAACATAAAGTACTGGAGTTGCTTGGGAATTTG CGGCTTGTTTGGTTGTGCTTTCTAAAAGCAACTTGTGGTTTCCAAAATTTCTGTTTATGAAGACTTGAGTCATTTTTTCT TTGATCTGAAACATTGTTATGGAAGCAAAAAATATGGATCAACATTCCAAAATTTTAGAACACGGAGAGTCATTTGTCGC TCTTGAATGCTCTACATATTCCCCTACTTCCCGCTTTACAAAAATTTTTGGACAACATGGACGTTTTGCTTGGGAGTTTC AACTTTCATAAGATTGTCAGGTTTTTTTGAATTGGTGCTTGGAATTAGGCGGAAATCGTTTTGAAATTAGCTAAAATAAT CATTATATCTCTATTTCTGCTGAATATGTTTTATTCCGGGTTTTTTCGTGATTTACTACCAAGTTAACCTTCATTTTG
CDS sequence (LotjaGi5g1v0015400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGATGCTCATGACACTGATAAGAACATTGAGGTATGGAAAATCAAGAAATTGATCAAGGCTCTTGAGGCTGCTAG AGGAAATGGGACCAGCATGATTTCCCTTATCATGCCTCCACGTGATCAAATTGCTCGTGTTACTAAGATGCTTGGTGATG AGTTTGGAACGGCTTCAAACATCAAAAGCAGGGTCAATCGACAGTCTGTGCTTGGTGCAATCACTTCTGCTCAGCAAAGG CTTAAGCTTTATAACAAGGTTCCTCCTAATGGGCTTGTTTTGTATACTGGAACAATTGTCACTGAAGATGGGAAGGAAAA GAAGGTCACCTTTGATTTTGAGCCATTCAGACCAATCAACGCCTCTCTCTATCTTTGTGACAATAAGTTTCACACCGAAG CTTTGAACGAGCTCCTGGAATCTGATGACAAGTTTGGATTTATTATCATGGATGGCAATGGCACTCTGTTTGGGACCTTG AGTGGTAATACAAGAGAGGTGCTTCATAAGTTTAGCGTGGATCTCCCAAAGAAACATGGGCGAGGAGGGCAATCTGCTCT ACGGTTTGCCCGTCTTCGTATGGAGAAGCGTCATAACTATGTGAGGAAGACTGCAGAGCTTGCCACCCAGTTTTATATCA ACCCTGCTACCAGCCAGCCCAATGTTTCAGGATTAATACTTGCTGGTTCAGCTGATTTCAAAACTGAGCTTAGCCAGTCA GACATGTTTGATCCTCGACTTCAGGCAAAAATACTCAATGTTGTGGATGTATCTTATGGAGGGGAGAATGGGTTTAATCA GGCTATTGAACTGTCTGCTGAAATTCTGGCCAATGTAAAGTTTATTCAGGAGAAAAAATTGATTGGAAAGTACTTTGAGG AAATCAGCCAAGATACTGGAAAGTATGTTTTTGGTGTTGATGATACCCTTAAAGCTCTGGAGATGGGAGCTGTTGAGACA CTTATTGTGTGGGAAAATCTGGATATGAATAGGTATGTCTTAAAAAACAGTGTTACCGGTGAGATTGTCATTAAGCACTA TAACAAGGAAGAGGATGCCAACCAGAGCAATTTTAGGGATCCTGTTAGCTCTGCTGATTATGAGGTTCAGGAAAAGTTGT CTCTGTTGGAGTGGTTTGCAAATGAATACAGACGATTTGGTTGCACTCTTGAGTTTGTCACCAATAAATCACAAGAAGGT TCACAGTTTTGCAGAGGTTTTGGTGGGATAGGTGGTGTCTTGCGTTACCAGCTTGATATGAGAACATTTGATGATTTATC TGATGATGGGGGTGTATATGATTCTGAATAG
Protein sequence (LotjaGi5g1v0015400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MADAHDTDKNIEVWKIKKLIKALEAARGNGTSMISLIMPPRDQIARVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQR LKLYNKVPPNGLVLYTGTIVTEDGKEKKVTFDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIIMDGNGTLFGTL SGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQS DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILANVKFIQEKKLIGKYFEEISQDTGKYVFGVDDTLKALEMGAVET LIVWENLDMNRYVLKNSVTGEIVIKHYNKEEDANQSNFRDPVSSADYEVQEKLSLLEWFANEYRRFGCTLEFVTNKSQEG SQFCRGFGGIGGVLRYQLDMRTFDDLSDDGGVYDSE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 434 | 434 | 1.7E-291 | – | |
| Gene3D | 1 | 135 | 135 | 1.6E-66 | ||
| PANTHER | 1 | 434 | 434 | 1.7E-291 | ||
| SMART | 4 | 140 | 137 | 1.6E-47 | ||
| SUPERFAMILY | 6 | 140 | 135 | 1.31E-57 | ||
| TIGRFAM | 13 | 417 | 405 | 2.1E-125 | ||
| Pfam | 17 | 138 | 122 | 6.2E-20 | ||
| Gene3D | 136 | 277 | 142 | 3.5E-67 | ||
| SUPERFAMILY | 142 | 276 | 135 | 1.57E-46 | – | |
| Pfam | 144 | 277 | 134 | 2.4E-41 | ||
| SUPERFAMILY | 278 | 420 | 143 | 1.47E-49 | ||
| Gene3D | 279 | 436 | 158 | 2.9E-60 | ||
| Pfam | 281 | 418 | 138 | 1.1E-36 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Translation release factor activity | Involved in catalyzing the release of a nascent polypeptide chain from a ribosome. | ||
| Biological process | Translational termination | The process resulting in the release of a polypeptide chain from the ribosome, usually in response to a termination codon (UAA, UAG, or UGA in the universal genetic code). |
Expression pattern of LotjaGi5g1v0015400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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