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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR004765
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 14 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.659s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v2295220.2
n.a. PREDICTED: niemann-Pick C1 protein-like [Glycine max] gi|356509590|ref|XP_003523530.1| chr1 26929153 26943886 -
2 domain predictions
2 GO terms
LotjaGi1g1v0001400.1
n.a. Niemann-Pick C1 protein; TAIR: AT4G38350.1 Patched family protein; Swiss-Prot: sp|O35604|NPC1_MOUSE Niemann-Pick C1 protein; TrEMBL-Plants: tr|A0A0R0G729|A0A0R0G729_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0001400 LjG1.1_chr1 446956 481566 +
2 domain predictions
2 GO terms
LotjaGi1g1v0001400.2
n.a. Niemann-Pick C1 protein; TAIR: AT4G38350.1 Patched family protein; Swiss-Prot: sp|O35604|NPC1_MOUSE Niemann-Pick C1 protein; TrEMBL-Plants: tr|A0A0B2RDB9|A0A0B2RDB9_GLYSO Protein DETOXIFICATION; Found in the gene: LotjaGi1g1v0001400 LjG1.1_chr1 447104 476886 +
2 domain predictions
2 GO terms
LotjaGi1g1v0001400.3
n.a. Niemann-Pick C1 protein; TAIR: AT4G38350.1 Patched family protein; Swiss-Prot: sp|O35604|NPC1_MOUSE Niemann-Pick C1 protein; TrEMBL-Plants: tr|A0A0B2RDB9|A0A0B2RDB9_GLYSO Protein DETOXIFICATION; Found in the gene: LotjaGi1g1v0001400 LjG1.1_chr1 447128 476997 +
2 domain predictions
2 GO terms
LotjaGi1g1v0001400.4
n.a. Niemann-Pick C1 protein; TAIR: AT4G38350.1 Patched family protein; Swiss-Prot: sp|P56941|NPC1_PIG Niemann-Pick C1 protein; TrEMBL-Plants: tr|A0A0R0G729|A0A0R0G729_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0001400 LjG1.1_chr1 447146 472931 +
2 domain predictions
2 GO terms
LotjaGi1g1v0001400.5
n.a. Niemann-Pick C1 protein; TAIR: AT4G38350.1 Patched family protein; Swiss-Prot: sp|O35604|NPC1_MOUSE Niemann-Pick C1 protein; TrEMBL-Plants: tr|A0A0R0G729|A0A0R0G729_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0001400 LjG1.1_chr1 447146 476869 +
2 domain predictions
2 GO terms
LotjaGi1g1v0001400.6
n.a. Niemann-Pick C1 protein; TAIR: AT4G38350.1 Patched family protein; Swiss-Prot: sp|O35604|NPC1_MOUSE Niemann-Pick C1 protein; TrEMBL-Plants: tr|A0A0R0G729|A0A0R0G729_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0001400 LjG1.1_chr1 447146 479764 +
2 domain predictions
2 GO terms
LotjaGi1g1v0001400.7
n.a. Niemann-Pick C1 protein; TAIR: AT4G38350.1 Patched family protein; Swiss-Prot: sp|O35604|NPC1_MOUSE Niemann-Pick C1 protein; TrEMBL-Plants: tr|A0A0R0G729|A0A0R0G729_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0001400 LjG1.1_chr1 447146 479764 +
2 domain predictions
2 GO terms
LotjaGi1g1v0436400.1
n.a. Niemann-Pick C1 protein; TAIR: AT1G42470.1 Patched family protein; Swiss-Prot: sp|P56941|NPC1_PIG Niemann-Pick C1 protein; TrEMBL-Plants: tr|A0A0B2RND6|A0A0B2RND6_GLYSO Niemann-Pick C1 protein; Found in the gene: LotjaGi1g1v0436400 LjG1.1_chr1 93074558 93094985 -
2 domain predictions
2 GO terms
LotjaGi1g1v0436400.2
n.a. Niemann-Pick C1 protein; TAIR: AT1G42470.1 Patched family protein; Swiss-Prot: sp|P56941|NPC1_PIG Niemann-Pick C1 protein; TrEMBL-Plants: tr|K7KHM4|K7KHM4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0436400 LjG1.1_chr1 93074782 93094205 -
2 domain predictions
2 GO terms
LotjaGi1g1v0436400.3
n.a. Niemann-Pick C1 protein; TAIR: AT1G42470.1 Patched family protein; Swiss-Prot: sp|P56941|NPC1_PIG Niemann-Pick C1 protein; TrEMBL-Plants: tr|K7KHM4|K7KHM4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0436400 LjG1.1_chr1 93074803 93094885 -
2 domain predictions
2 GO terms
LotjaGi1g1v0436400.4
n.a. Niemann-Pick C1 protein; TAIR: AT1G42470.1 Patched family protein; Swiss-Prot: sp|P56941|NPC1_PIG Niemann-Pick C1 protein; TrEMBL-Plants: tr|K7KHM4|K7KHM4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0436400 LjG1.1_chr1 93075212 93092075 -
2 domain predictions
2 GO terms
LotjaGi1g1v0436400.5
n.a. Niemann-Pick C1 protein; TAIR: AT1G42470.1 Patched family protein; Swiss-Prot: sp|P56941|NPC1_PIG Niemann-Pick C1 protein; TrEMBL-Plants: tr|A0A0B2RND6|A0A0B2RND6_GLYSO Niemann-Pick C1 protein; Found in the gene: LotjaGi1g1v0436400 LjG1.1_chr1 93075212 93094008 -
2 domain predictions
2 GO terms
LotjaGi1g1v0436400.6
n.a. Niemann-Pick C1 protein; TAIR: AT1G42470.1 Patched family protein; Swiss-Prot: sp|P56941|NPC1_PIG Niemann-Pick C1 protein; TrEMBL-Plants: tr|K7KHM4|K7KHM4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0436400 LjG1.1_chr1 93075212 93094028 -
2 domain predictions
2 GO terms