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TREX

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

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  • IPR004808
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We have found 22 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.537s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
n.a. PREDICTED: exodeoxyribonuclease-like [Glycine max] gi|356508768|ref|XP_003523126.1| chr1 3394687 3403097 -
n.a. PREDICTED: DNA-(apurinic or apyrimidinic site) lyase 2-like [Glycine max] gi|356502118|ref|XP_003519868.1| chr4 14837862 14846302 +
n.a. PREDICTED: DNA-(apurinic or apyrimidinic site) lyase 2-like [Glycine max] gi|356502118|ref|XP_003519868.1| chr4 14837862 14846302 +
n.a. PREDICTED: LOW QUALITY PROTEIN: apurinic endonuclease-redox protein-like [Glycine max] gi|356537505|ref|XP_003537267.1| chr5 12483035 12491362 +
n.a. DNA-(apurinic or apyrimidinic site) lyase; TAIR: AT3G48425.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q5XF07|APE1L_ARATH DNA-(apurinic or apyrimidinic site) lyase; TrEMBL-Plants: tr|I1JXF2|I1JXF2_SOYBN DNA-(apurinic or apyrimidinic site) lyase; Found in the gene: LotjaGi1g1v0231200 LjG1.1_chr1 54177619 54185018 +
n.a. Endonuclease/exonuclease/phosphatase family protein; Swiss-Prot: sp|P27695|APEX1_HUMAN DNA-(apurinic or apyrimidinic site) lyase; TrEMBL-Plants: tr|A0A061DW40|A0A061DW40_THECC Uncharacterized protein; Found in the gene: LotjaGi1g1v0664400 LjG1.1_chr1 122627622 122632871 +
n.a. Endonuclease/exonuclease/phosphatase family protein; TAIR: AT4G36050.2 endonuclease/exonuclease/phosphatase family protein; Swiss-Prot: sp|P37454|EXOA_BACSU Exodeoxyribonuclease; TrEMBL-Plants: tr|A0A0B2RQP7|A0A0B2RQP7_GLYSO Uncharacterized protein; Found in the gene: LotjaGi2g1v0080500_LC LjG1.1_chr2 21432687 21441594 +
n.a. Endonuclease/exonuclease/phosphatase family protein; TAIR: AT5G05520.1 Outer membrane OMP85 family protein; Swiss-Prot: sp|P37454|EXOA_BACSU Exodeoxyribonuclease; TrEMBL-Plants: tr|A0A0B2PJ66|A0A0B2PJ66_GLYSO Uncharacterized protein; Found in the gene: LotjaGi2g1v0087300_LC LjG1.1_chr2 25381219 25387112 -
n.a. Endonuclease/exonuclease/phosphatase family protein; TAIR: AT2G41460.1 apurinic endonuclease-redox protein; Swiss-Prot: sp|Q73GP1|PYRB_WOLPM Aspartate carbamoyltransferase; TrEMBL-Plants: tr|A0A072VJ84|A0A072VJ84_MEDTR Endonuclease/exonuclease/phosphatase family protein; Found in the gene: LotjaGi2g1v0107400_LC LjG1.1_chr2 36589604 36594142 +
n.a. Endonuclease/exonuclease/phosphatase family protein; TAIR: AT1G40390.1 DNAse I-like superfamily protein; Swiss-Prot: sp|B9EAS8|RF3_MACCJ Peptide chain release factor 3; TrEMBL-Plants: tr|A0A151TSI2|A0A151TSI2_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0176000_LC LjG1.1_chr2 59447879 59453013 +
n.a. Endonuclease/exonuclease/phosphatase family protein; TAIR: AT5G02310.1 proteolysis 6; Swiss-Prot: sp|F4KCC2|PRT6_ARATH E3 ubiquitin-protein ligase PRT6; TrEMBL-Plants: tr|K7MS60|K7MS60_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0198800_LC LjG1.1_chr2 63438169 63439280 -
n.a. Endonuclease/exonuclease/phosphatase family protein; TAIR: AT2G41460.4 apurinic endonuclease-redox protein; Swiss-Prot: sp|P37454|EXOA_BACSU Exodeoxyribonuclease; TrEMBL-Plants: tr|K7MR81|K7MR81_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0208200_LC LjG1.1_chr2 65363904 65372059 +
n.a. Endonuclease/exonuclease/phosphatase family protein; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P51173|APEA_DICDI DNA-(apurinic or apyrimidinic site) lyase; TrEMBL-Plants: tr|A0A151QNL1|A0A151QNL1_CAJCA Putative ribonuclease H protein family; Found in the gene: LotjaGi3g1v0081100_LC LjG1.1_chr3 9033046 9033912 -
n.a. Endonuclease/exonuclease/phosphatase family protein; TAIR: AT3G21530.4 DNAse I-like superfamily protein; Swiss-Prot: sp|P51173|APEA_DICDI DNA-(apurinic or apyrimidinic site) lyase; TrEMBL-Plants: tr|A5B9F0|A5B9F0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0183000_LC LjG1.1_chr3 25640515 25642018 +
n.a. Endonuclease/exonuclease/phosphatase family protein; TAIR: AT2G36910.1 ATP binding cassette subfamily B1; Swiss-Prot: sp|Q9ZKR8|QUED_HELPJ 6-carboxy-5,6,7,8-tetrahydropterin synthase; TrEMBL-Plants: tr|I3T1C0|I3T1C0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0319000_LC LjG1.1_chr3 67688282 67689794 -
n.a. Endonuclease/exonuclease/phosphatase family protein; TAIR: AT1G40390.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P09030|EX3_ECOLI Exodeoxyribonuclease III; TrEMBL-Plants: tr|A0A151QNL1|A0A151QNL1_CAJCA Putative ribonuclease H protein family; Found in the gene: LotjaGi3g1v0349400_LC LjG1.1_chr3 72738721 72741282 -
n.a. DNA-(apurinic or apyrimidinic site) lyase; TAIR: AT4G36050.3 endonuclease/exonuclease/phosphatase family protein; Swiss-Prot: sp|F4JNY0|APE2_ARATH DNA-(apurinic or apyrimidinic site) lyase 2; TrEMBL-Plants: tr|A0A151QUY4|A0A151QUY4_CAJCA DNA-(apurinic or apyrimidinic site) lyase; Found in the gene: LotjaGi4g1v0128100 LjG1.1_chr4 18676315 18685137 +
n.a. Endonuclease/exonuclease/phosphatase family protein; TAIR: AT4G36050.2 endonuclease/exonuclease/phosphatase family protein; Swiss-Prot: sp|F4JNY0|APE2_ARATH DNA-(apurinic or apyrimidinic site) lyase 2; TrEMBL-Plants: tr|A0A0B2R0X2|A0A0B2R0X2_GLYSO Mediator of RNA polymerase II transcription subunit 25; Found in the gene: LotjaGi5g1v0120300_LC LjG1.1_chr5 25105875 25106425 -
n.a. DNA-(apurinic or apyrimidinic site) lyase; TAIR: AT2G41460.1 apurinic endonuclease-redox protein; Swiss-Prot: sp|P45951|ARP_ARATH DNA-(apurinic or apyrimidinic site) lyase, chloroplastic; TrEMBL-Plants: tr|K7K9G6|K7K9G6_SOYBN DNA-(apurinic or apyrimidinic site) lyase; Found in the gene: LotjaGi5g1v0135000 LjG1.1_chr5 31929476 31938027 +
n.a. Endonuclease/exonuclease/phosphatase family protein; TAIR: AT4G01480.1 pyrophosphorylase 5; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|F4NCL3|F4NCL3_BETVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0035400_LC LjG1.1_chr6 6731443 6735652 -
n.a. Endonuclease/exonuclease/phosphatase family protein; TAIR: AT4G36050.3 endonuclease/exonuclease/phosphatase family protein; Swiss-Prot: sp|O00370|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr|A0A151QNL1|A0A151QNL1_CAJCA Putative ribonuclease H protein family; Found in the gene: LotjaGi6g1v0039500_LC LjG1.1_chr6 7633793 7638403 +
n.a. Endonuclease/exonuclease/phosphatase family protein; TAIR: AT2G41460.1 apurinic endonuclease-redox protein; Swiss-Prot: sp|P51173|APEA_DICDI DNA-(apurinic or apyrimidinic site) lyase; TrEMBL-Plants: tr|A0A151QNL1|A0A151QNL1_CAJCA Putative ribonuclease H protein family; Found in the gene: LotjaGi6g1v0319200_LC LjG1.1_chr6 63620816 63625562 +