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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0135000 |
| Transcript ID | LotjaGi5g1v0135000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DNA-(apurinic or apyrimidinic site) lyase; TAIR: AT2G41460.1 apurinic endonuclease-redox protein; Swiss-Prot: sp|P45951|ARP_ARATH DNA-(apurinic or apyrimidinic site) lyase, chloroplastic; TrEMBL-Plants: tr|K7K9G6|K7K9G6_SOYBN DNA-(apurinic or apyrimidinic site) lyase; Found in the gene: LotjaGi5g1v0135000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:31929476..31938027) extracted from Lotus japonicus Gifu genome v1.2.
CACCATCATTTCCCGAGCTTACCCTCTATTTTTTTTTTCTTCTTTACTATCATTTAAAAGAAAATTTCATAAATATTTAT TGTTTTAGAAAAATATATATTAACAAATTCCTTGCCCCTCTCATGTCCCAGGCCCTATTCTTTCTCAGCCTGTTGGCGGT TCTTTTTCTCTTGTTCGGTGTTTACCTGACATGAAACAACTCCTGCACTTGGTGCATACCAGCTCTATCAATCTCATCAG GTTTCTTTTCTGTTGCGCCTCTTCTTCATTTTCATATCCCAAAACTGCGTGAAAATTAAAATTGATTTATTCTGTTCTTC TTTTACGGGAAAGGTTTTATTTTTTTTATTTTCCCTTTTTCAAAACATATTCAAAAATGTAGTACTTGTACCACCCTTTT TGGAATTTCAAGTTACAGGGTTACTGAACTGACTGAGAATATTGTTGTAGTTTTGCAGTGGTTTATAAGCATTTGAACAC TAAGACATTGGTTTGTCCCACCCTGAAAGCAATGGGGTCTCAGAGACTTTTTTCAAATTCTTCACAACCCATGTTACCAT TTGTTGAGGAAAAGAAGGATATGAAGCTTAATAAAGGGTTGGAAGCAAGTCCAGGTTCCAAGAAGCATGTTATTAAGGTC TAATTAGTGTTTCAGTAATATTGTCATTCTTATGCTACTTAGTGAATTGTATTCCTCTTTTTTTTTTGGTTATTCATTAT AATTTGTTAATATAGGGAAATGATGCTAATAGCTATTCCATTGAGATTGAGAGGTTAAGAAATGACCCCTCCATTGTAGA CACAATGACTGTTCAGGAACTCCGGAAAACCTTGAAGTAAGAAGCCATGTCTTTTCCTTATAAAGTAGCTACTTTTTTAG CTCAAGAAATATTTTTTATGTCAGATTTTGGGAATGGTTTTGAATTCTCAGGAGTATCAGGGTCCCTGCCAAAGGTCGTA AAGAAGATCTTTTGTCTACGTTGAAGAGTTTCATGGACAATAATATGGGTGGTATACAATTCTATTTTCATCATCTGAAC TTTTACTGTTTCTGGGGTTGGAAGGTCATGGAGAGTTTTTTTTTAAACATTAATTATTGCATGCAAACTGTCTTTTACTC TATAGCTTTCGATTTGCTCATTTAAAATTTGCTTAAGCTGTATAATTTGAATGGTTAATAGGTTTCTTCATGCACTGCAG AACAGCATCCTCAAATAGAAGAAGAACACGGGCTGTTGATTTCTTCTGAGAATACATCTGTCGAAGTGAAAACTAAAAAG GTAGATGAAGACCATGTTGATGATATCAATGACAATCCAGAGGTATTTGAACATAGCCGGGGTAAGAGAAGGTTAAAACA ATCAGGATCTGAGAGTGAAACTGTCAAAGTTACAACCAAGAAGAAGCTGTTAGTGGAATCAGACGAGGTTTCAGGTTGTG TTGCAGAATATGTAGAGTTCTGATATGTCTACTTTTAAAATGTTTTTAAGCATAACTCTTTTTCATTTTAAATTATTTCT TGATGCTATTTTCTCCCTGACTCGTCAGTTTTGGTTCAAATGTCACTCATTCAACTAGGGATCGAATCTTATGTGGGTGT TTGTTGTCAGATTTTAAGCCTTCTAGGGCAAAGAGAAGAGTATCTTCAGATATTGTCAGGGTTGTTTCACAGTCAGATGA AATCAGTACGACCACTATTCCAACTGAACCTTGGACTGTTCTTGCCCACAAGAAGCCTCAAAAAGATTGGATTGCATATA ATCCGAAAACTATGCGGCCCCAACCTCTTACTCGGGATACAAAATTTGTCAAGCTTTTGTCTTGGAATGTCAATGGATTG AGAGCATTGTTAAAACTAGAAGGGTTCTCAGCCCTTGAACTTGCCCAAAGGGAAGACTTTGATGTATTGTGCTTGCAAGA GACTAAACTGCAGGTAGAATATTGATGTTTGTTTAAGCCTTTCAGAATTGTATTTTCCCATAGTCCACAGTTTTAGTTTG AGGCTTGTATAAAAAAAATAAAATTAGAGAAGTACTTTTTTTCCCTTTATTTTTGCTGGTTTATATGTGCATCTTGTGTT GTGGTTATGTCAAATTATGTATGTTCTGATGGTTGCTGGCTTAGAGATAGCTGATTTCAATACATTGTTTTAATTAATCA AGTTAGTTTTGCTTTTGGGGTTTGTATTTATAAAGATTCATTCTTCAAGTCAATAACATTGTAGATAAGTTGAAAAAGAA AGGAAAAAAAGAAGGGCAGGCACAAACCTTAACACAATGTTTGTGGAGTTATGGATCTATATTGCCTTTGAAATCCTGAT ACACAGATATGCTAGTCATTTAGGTTTTGCTTGACGTTAACTTAAGGTGTTAGTTGTTAATATTTTCGAAGTTTTCTGAT TGTAATCAAACTTTAGCCTGTTATGTAAGATAGTGCAAATAAGATATTGAAATTCAACATTTCTTGTGATATATGATACT TATGCATTTTTCACTCGGTCTTGTTTGCCAATACATTCTGCACCTTCAACTAGTTTGATCTCTATAGAAGTTTGGTGATG GTTTGTGTTAGATAACTTCCAAGTTGCAAGAACTAAAGGGCCTCTAATTTTCATGAAACTGTAGGAACAGATTGTGGGAA CTTAATCTTGTTTTGTTTAGGGCATAAAAGTTTCAAGTATTACTAGTTTATTATAGTTGACTTGGATAATACTAGTTTTG TTTGGTGTCAGGTTCTCTTGGTGATTTGTTGCGTTGGGCCATTTGGGTAAGGTTCTTCTACTTTGATCTCCCCTGTCTCC TTAGTACGATGGTATCTGAGCGTAGGTCTGTTTATTGGAGACCCCCATAAATAGGCCAACCGCGGATGTCCAATCCTGCA AACTTCACATTCCATATGTCTAGCTCTAGGCGTGAGGGTGTGTGTTAAGATGTCCAACATTGACTAGGGATATGACCAAA ATAAGTCCTTATATAGGGTGAAGCAATCCTCACCTCAAAGTTAGCTTTTGGGGTAGAGTTAGGCCTAGCTCAAATTCTAG GACTAAGAAATAAGATATCAAATCATATCTATGAGATTTTGGATGACCTTTTCCTTCTTTACCATTGTTCCTTGTAACTA CACACACACACACACTACTGATCATACAAAGTATGGATGAAATATTCAGTTTCTGTAATTTCAGCTTGGTATGGTATCAG AGTTTTCTGGTCTAGGAACTCTAATTATGTGTTCAGCTGCCGCCAAGGAGGCTGACCCAGTTTCATAACGTCATCGGACA ACCAAGGTAGAATTGTCGTCTGTCTCATAGGCCGGTGTTCAGCCTTCTCTCTAAGAACCGTTACTAGAGACTTTGCCATG GCTCACAGCCTGTGCTGCCTTCACTGGTACGTGTGGTCCTGGCACCACCTTCCCAAAGTCCGTTCGCCGCGTTTCCTATC CTATTTGGTTCATCACCTTTCACTGGTTCCATTGAACCTACTTTCTACTTGTGGGTCTTTTGTTGAAGACGGGTGTATCT TTACTATTTTAACTTGTAACTTCGTTTAATACAACAGATCAAACAACATATCAATAAAATATTCAGTTTGTCTGATTTAC ACTGGTTAAGGTGGTCTTGTTGTTAGGGAGATAGGAATTGTTTGTAGGATATTTTGTTTATGAGATGGAAGATGGATGTT CAACAGTTCAATCCTTTTATAGCAGAAGAACATTAAGGGTAAATGAATTAAATGTAAAATTGCACCATATAATATCAATT ATCAACTATTATAATAGAACTAGGCCTGAAGTTTCTGTATCATAACAGCAAAGAATGTTTATTTGCAAATTGTTAAATAT GTGAATCGTGAGAAGCTAATCATAAGTCTTAGTTGCTGTCTTTAATAGCCTATCAGTCATGATGAAGATGTTTATTTGAA AACTCATAGTGGCTGTATTCTCTCCTATTTATGATTGTTCTAATTTTGTTCACAGGAGAAGGATATTAATGAAATCAAAC GGCAGTTGATAGATGGCTATGAGAACAGCTTTTGGACTTGTAGTGTTTCTAAACTTGGTTATTCTGGAACAGCAATAATT TCAAGGGTGAGTTGACTATGTTTGTCCAGGAACTTTTACTACATAATATTAAATTGTTTTTTATATGCGCAGAAGAAAAG TTTGTTTATAGTAATGACACTCCTTGCAGATTGACTCATTCCAAGTTTTATTATTGAACTTAAAATTTAATGCTGCATGA TTATTAAGTAACAATGTCTTGGTCAATCTTTTCCACATGAAATTTTTGGATAGAGATTAATGTTGATGAAAGAATTACTT TTTTCCCTACTTGAGGTGCATCTTTGGTTTCAGCCTACTTTAGTCATATTCTTTCTTTAGCAGAGATAAATACTAATCAT GTTTTATCCTAAATTACGATTGTTTGGTATTCTGTTGGTTATTCATTTAACTTGTGGAATTGAGATTGGAGCCTGAAAAA GTGAAGACTGAAGATAAAATGATTGTCATTCTAGCAGATAGACTGGCTATTGGATTTTCATTTTATGAATTGCAGTTCAA AGTAGTCATTCTGTCTCTAATATTGGTTTTCTATTAATTGAAATGCTGGCAGATAAAGCCACTTTCAGTTAGATATGGCC TAGGTATATCTGATCATGATACTGAGGGTAGACTTGTGACCGCAGAGTTTGATACATTTTATTTGATATGTGGATACATC CCCAATTCTGGTGATGGCTTGAAAAGACTGGTATTGCGTTCAATTACTTTCCTTTTATATTTTTAAATTATTATATTTTG GCTTAAATACTCTGGAGGTCCCTGAAATTGTCTCCCGTACGAAAATAAGTCCCTGAAATTTTTTTTTCCGATTCCAAATC CCTGGAAATATTTTTTAATCAGAATAAGTCCCTACTCGTGTTTCTAGCCTATGTGGCACAATTTTTGCTGAGTCATTTAT TCCACGTGGCTTTTCTATTTTTTTTAAATACACATGGATTAAAAAAATAAAATTAAATATTTTAATTTTAATTTAAAATC TTTTTAGGGTTAATTAGGTTAATAAGATTTTAATTTTAAATTTAAACATTTAAATTTAAAATTAAAATCTTTTTAGGGAT TTAGGGTTAATTAGATTTAGGGTTAATTAGGTTAATAACATTTTAAATTTAAATTTAAATTTAAATGTTTAATTTTATTT TTTAATATATGTGTATTTAAAAAAATAGAAAAGCCACGTGGAATAAATGACTCAGCAAAAATTGAGCCATATAGGCTGGA AACACGAGTAGAGACTTATTCTGATTAAAAAAATAATTTCAGGGATTCGGAATCGGAAAAAAAAATTCCAGGGACTTATT TTCGTACGGCATACAATTTTAGGGACCTCCAGAGTATTTAAACCTTATATGTTCTATATTTCAATCTGACAATGGTGTAT CCTCATCCAGCTAATCCTTCTGTAATTGAATATAGTCTTACAGGGTGACTCAATGGGATCCTTCTCTCAGCAATTATTTG AAAGTATGTATAGCTCCTTTCCCCTCACCTAATGCGATAATTCTTGATTAATGCTGTAGTAGGTATATATTGCTCCTTTC ATACTATTATATTCCCTTGTCAGAATACACCATCCATCCTAATGTGATGCTACCTTTCTTCTTGTCATTTATGCCAAATT TGGTTAATGATATGCCCTAGATAGAGTTTTTTTTATTCATGTTTGCATGTGTTAGAAAAATTTGTATTGCTAATGTTGTT ATATCAATTATTAAATTCCTTGAAAAACCATTCACAATGTTGGGTATATGGATGGATCACTTTATTTCAACAAAAAAATC GAGGTGCAGGGTGATGCCTCATGTTGTACACCACTACACTCTTTGCCATCTGTGTTTAACTTTTTGTTGATATACTGTGT AAATGCTATTTTCTAAGAAGGAATATCTACATGCTATCAAAAACGTTAGTTGTTTGTATCTATTTTTAGGATTCTTGATT AATTCTATTCTTGATACAGGAGCTGGAAAAGACAAAACCTGTTGTTTTGACTGGGGATCTGAATTGTGCTCATGAAGAGA TAGACATATATAACCCTGCTGTGAGTGATTCTGATTTACTATTCTGATATTCTCCATGAAAACAGTAAATGTTTCACATC GGGATACCTCAGTAAATAATACCAATGAGGCTCAGCACTTGTTTCTTCTAGAAATTACTAGATTTAGTAGAAAAGGGGGA GAAGTAATAAAAAAGTTGTTAATATTTTTGTTAATATGCCTTTGAGAATTTGTGACAGAACCTGATTCAATTTCTGTAAC AAACCCTAATTCCCAAATTGGGAATCAGAGGAGATACATGAGAGAGATACCAAACATCCTCTCTAACCCTAGAAAGAGAA CCACTTCTCTCTCTAAACCCAATTTCTAACTGAATACAAAGATACCCCTAATGTTCACTCATCCCTTATTTATAGGCAAC ATGCCTTATTACTACCTTCTAACTAACTACCTAATATGTGAGTACCTATCAATTTGACTGCAATTATAATTCAATCCTCT CATTATGGCTTGCTATAAAAATTGAAAGAAAATTTCAACATTACATATCAATGTTTACAAGTGGAGGAGTATTAACGTAA TCTTCTAAAAACTACTTAACACTATGATAGTCCATTTTAAAAAATGCCAATACAGTTTAAGAAGTGATCAATTAAGAAAG CTGCCATCGGCAAAGGGAAATGCTTGTTTGGAACTTGGCACAAGGAATGCCTTCACGAAAGCGCACGACACATTACCTGT TATTTTTTATTTAGCAGTTACTAAATTCAACCTGTAATTATGTAATGTTATCAACAACTGTGATTGGCCATTTGCTTTTC GTCAAGGCTATCGTGCTGTGAGTGTCGTGCCAAATAGCATGACTGATAGGTTAATATATGAACTACTGAAAAGTGTGCTA ATCCAACCGATCTTGCTTGGTTTATCTCCATCGAATCAAATTAGCAAAAGTTGTGTGGTCATAGGCCGTGCTTGCTATAT GTATGTAGAAAATAAAAAACAAGATGGAATTTTAAAAAATAATCTATCTGTTAATCAATATCATGAATAATCAAATGGAG TGTTGAAGTTTCCAAGAGCACAAAGATCAGTGTTTTTAATCTATTCTGACTGTTACGTATATCCACAGGGTAACAAAAAA AGTGCTGGGTTTACAGATGAAGAAAGAAAATCATTTGCAGCAAACTTCTTATCTAGGGGATTTGTTGATACCTTCCGTAG GCAGCATCCTGATGTCGTTGGATATACATATTGGGGCTATCGGCATGGTGGGCGCAAGACTAACAGAGGTAATTTTATCA CACTCCTACAATTGTTTTCTTGCATATTTGTAGTTTGTATAAAATGATCTGGTGATGTTATGTGTGAAAATTGATAAATA GAAAATGACAATTAGATTGATAACTACTTATTACATGATTTTTGCTCATGTGGTACTGTGGTAGTTCCCCTTGACTTTTC CCCTTACCCCTTTGCATATGTTCCCGAATTTGTTTGCTGGATGGGAGTCTTTTAAATGCTTTTTCCTTTTGTGGAGATAA TTGCAACCAATAGGAAAAAACTTAGTTACCCACTACTTGATATTTTATTATGATGATAATTTCCTGAACTACCCTTTTCT AGGCCGTGTGTCATGTTCTAGTTGAGCAACTATAAAAATTGCACACATGAAACTGTACTTAAGTTTTGTCCTTTTACGAA AGCGTCTAATTTCAATTTGCAAATGTTTTGGAAGAATTATCTAGAAGAAGCACACACAAGACTCATTTTTGTGTATATCT ATCTCATTTTAGTAGTGAATAGTCAATTTGCAATATGTTTTATGAGAATGACCTTTACAATAAGGTTTCTTCTGTGTTCT CTCAATAGTTTGTTTCAACATTTGAAACAGGATGGCGTCTTGACTATTTCCTTGTCTCAGAATCCATAGCAGACAAAGTT CATGATTCATACATTCTCCCTGATGTTATGGGTAGTGATCATTGTCCTGTTGGCCTCATTATCAAGCTTTAGTTCTATGA ATGCAGCACCCAGTCTGAATCTGTAAGGAATGTTTGCTTGAAATTGTAATCTATGAGCAAGCAGGGATTTTACATTTTTT TTGTCTGGCTTGCGTCATCTTTGAAAATTAGCAACCTTGTGCATTCTAATCCATGATTTCAACCAAGCTATCAGAATGGT GTACGGGGTATCAAATCATGTGATGTTAATTGAAAGAACATAAAGAAACTAGAACCTATAACAAAAATTGGGAGTAAGCA ATTATCTACAAGTCAAAAGGAAATAAAAAAGTGCAGGTAAAGAAAATGAACGTACGTGAGTTTCCCATAGTTCATATTTA TTATGCTCGGAACTACATTGTGGATGTGGATAATTAAAAGTATGAATTTACACATTAAAAGTATCAGTGTTTGTTATAAA AAAGTATCAACTTTAAATTGTATTTAGGGTTACCTTAATATAATTCAATACTCTTTCCGTTCCAGAAAGATT
CDS sequence (LotjaGi5g1v0135000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAACAACTCCTGCACTTGGTGCATACCAGCTCTATCAATCTCATCAGTTTTGCAGTGGTTTATAAGCATTTGAACAC TAAGACATTGGTTTGTCCCACCCTGAAAGCAATGGGGTCTCAGAGACTTTTTTCAAATTCTTCACAACCCATGTTACCAT TTGTTGAGGAAAAGAAGGATATGAAGCTTAATAAAGGGTTGGAAGCAAGTCCAGGTTCCAAGAAGCATGTTATTAAGGGA AATGATGCTAATAGCTATTCCATTGAGATTGAGAGGTTAAGAAATGACCCCTCCATTGTAGACACAATGACTGTTCAGGA ACTCCGGAAAACCTTGAAGAGTATCAGGGTCCCTGCCAAAGGTCGTAAAGAAGATCTTTTGTCTACGTTGAAGAGTTTCA TGGACAATAATATGGGTGAACAGCATCCTCAAATAGAAGAAGAACACGGGCTGTTGATTTCTTCTGAGAATACATCTGTC GAAGTGAAAACTAAAAAGGTAGATGAAGACCATGTTGATGATATCAATGACAATCCAGAGGTATTTGAACATAGCCGGGG TAAGAGAAGGTTAAAACAATCAGGATCTGAGAGTGAAACTGTCAAAGTTACAACCAAGAAGAAGCTGTTAGTGGAATCAG ACGAGGTTTCAGATTTTAAGCCTTCTAGGGCAAAGAGAAGAGTATCTTCAGATATTGTCAGGGTTGTTTCACAGTCAGAT GAAATCAGTACGACCACTATTCCAACTGAACCTTGGACTGTTCTTGCCCACAAGAAGCCTCAAAAAGATTGGATTGCATA TAATCCGAAAACTATGCGGCCCCAACCTCTTACTCGGGATACAAAATTTGTCAAGCTTTTGTCTTGGAATGTCAATGGAT TGAGAGCATTGTTAAAACTAGAAGGGTTCTCAGCCCTTGAACTTGCCCAAAGGGAAGACTTTGATGTATTGTGCTTGCAA GAGACTAAACTGCAGGAGAAGGATATTAATGAAATCAAACGGCAGTTGATAGATGGCTATGAGAACAGCTTTTGGACTTG TAGTGTTTCTAAACTTGGTTATTCTGGAACAGCAATAATTTCAAGGATAAAGCCACTTTCAGTTAGATATGGCCTAGGTA TATCTGATCATGATACTGAGGGTAGACTTGTGACCGCAGAGTTTGATACATTTTATTTGATATGTGGATACATCCCCAAT TCTGGTGATGGCTTGAAAAGACTGTCTTACAGGGTGACTCAATGGGATCCTTCTCTCAGCAATTATTTGAAAGAGCTGGA AAAGACAAAACCTGTTGTTTTGACTGGGGATCTGAATTGTGCTCATGAAGAGATAGACATATATAACCCTGCTGGTAACA AAAAAAGTGCTGGGTTTACAGATGAAGAAAGAAAATCATTTGCAGCAAACTTCTTATCTAGGGGATTTGTTGATACCTTC CGTAGGCAGCATCCTGATGTCGTTGGATATACATATTGGGGCTATCGGCATGGTGGGCGCAAGACTAACAGAGGATGGCG TCTTGACTATTTCCTTGTCTCAGAATCCATAGCAGACAAAGTTCATGATTCATACATTCTCCCTGATGTTATGGGTAGTG ATCATTGTCCTGTTGGCCTCATTATCAAGCTTTAG
Protein sequence (LotjaGi5g1v0135000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKQLLHLVHTSSINLISFAVVYKHLNTKTLVCPTLKAMGSQRLFSNSSQPMLPFVEEKKDMKLNKGLEASPGSKKHVIKG NDANSYSIEIERLRNDPSIVDTMTVQELRKTLKSIRVPAKGRKEDLLSTLKSFMDNNMGEQHPQIEEEHGLLISSENTSV EVKTKKVDEDHVDDINDNPEVFEHSRGKRRLKQSGSESETVKVTTKKKLLVESDEVSDFKPSRAKRRVSSDIVRVVSQSD EISTTTIPTEPWTVLAHKKPQKDWIAYNPKTMRPQPLTRDTKFVKLLSWNVNGLRALLKLEGFSALELAQREDFDVLCLQ ETKLQEKDINEIKRQLIDGYENSFWTCSVSKLGYSGTAIISRIKPLSVRYGLGISDHDTEGRLVTAEFDTFYLICGYIPN SGDGLKRLSYRVTQWDPSLSNYLKELEKTKPVVLTGDLNCAHEEIDIYNPAGNKKSAGFTDEERKSFAANFLSRGFVDTF RRQHPDVVGYTYWGYRHGGRKTNRGWRLDYFLVSESIADKVHDSYILPDVMGSDHCPVGLIIKL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 82 | 145 | 64 | 2.5E-6 | ||
| SUPERFAMILY | 98 | 135 | 38 | 4.94E-6 | ||
| SMART | 100 | 134 | 35 | 5.0E-7 | ||
| ProSiteProfiles | 100 | 134 | 35 | 9.487 | ||
| PANTHER | 157 | 544 | 388 | 4.1E-143 | – | |
| PANTHER | 157 | 544 | 388 | 4.1E-143 | ||
| MobiDBLite | 172 | 199 | 28 | - | – | |
| Gene3D | 252 | 543 | 292 | 2.7E-99 | ||
| ProSiteProfiles | 284 | 544 | 261 | 53.641 | ||
| TIGRFAM | 284 | 542 | 259 | 2.6E-94 | ||
| TIGRFAM | 285 | 542 | 258 | 5.5E-77 | – | |
| CDD | 285 | 542 | 258 | 1.19171E-145 | – | |
| SUPERFAMILY | 285 | 543 | 259 | 1.57E-69 | ||
| Pfam | 287 | 535 | 249 | 5.0E-18 | ||
| ProSitePatterns | 314 | 323 | 10 | - | ||
| ProSitePatterns | 503 | 514 | 12 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | Nuclease activity | Catalysis of the hydrolysis of ester linkages within nucleic acids. | ||
| Molecular function | Endonuclease activity | Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks. | ||
| Biological process | DNA repair | The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway. |
Expression pattern of LotjaGi5g1v0135000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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