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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR004859
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 14 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.236s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0279609.1
n.a. PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max] gi|356576739|ref|XP_003556487.1| chr0 145134862 145143808 +
2 domain predictions
2 GO terms
Lj0g3v0279609.2
n.a. PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max] gi|356576739|ref|XP_003556487.1| chr0 145134862 145143808 +
2 domain predictions
2 GO terms
Lj1g3v4957670.1
n.a. PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max] gi|356505926|ref|XP_003521740.1| chr1 60445179 60452305 +
2 domain predictions
2 GO terms
Lj5g3v0175560.1
n.a. PREDICTED: 5'-3' exoribonuclease 3-like [Glycine max] gi|356562399|ref|XP_003549459.1| chr5 1569459 1580433 +
2 domain predictions
2 GO terms
Lj5g3v0175560.2
n.a. PREDICTED: 5'-3' exoribonuclease 3-like [Glycine max] gi|356562399|ref|XP_003549459.1| chr5 1569459 1580433 +
2 domain predictions
2 GO terms
LotjaGi1g1v0778800.1
n.a. 5'-3' exoribonuclease; TAIR: AT1G54490.1 exoribonuclease 4; Swiss-Prot: sp|Q9FQ04|XRN4_ARATH 5'-3' exoribonuclease 4; TrEMBL-Plants: tr|I1JRL0|I1JRL0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0778800 LjG1.1_chr1 135073176 135082756 +
2 domain predictions
2 GO terms
LotjaGi1g1v0778800.2
n.a. 5'-3' exoribonuclease; TAIR: AT1G54490.1 exoribonuclease 4; Swiss-Prot: sp|Q9FQ04|XRN4_ARATH 5'-3' exoribonuclease 4; TrEMBL-Plants: tr|A0A151TXT7|A0A151TXT7_CAJCA 5'-3' exoribonuclease 4; Found in the gene: LotjaGi1g1v0778800 LjG1.1_chr1 135073176 135083484 +
2 domain predictions
2 GO terms
LotjaGi1g1v0778800.3
n.a. 5'-3' exoribonuclease; TAIR: AT1G54490.1 exoribonuclease 4; Swiss-Prot: sp|Q9FQ04|XRN4_ARATH 5'-3' exoribonuclease 4; TrEMBL-Plants: tr|A0A151TXT7|A0A151TXT7_CAJCA 5'-3' exoribonuclease 4; Found in the gene: LotjaGi1g1v0778800 LjG1.1_chr1 135073577 135075929 +
2 domain predictions
2 GO terms
LotjaGi3g1v0472700.1
n.a. 5'-3' exoribonuclease 3; TAIR: AT1G75660.1 5'-3' exoribonuclease 3; Swiss-Prot: sp|Q9FQ03|XRN3_ARATH 5'-3' exoribonuclease 3; TrEMBL-Plants: tr|V7AFU3|V7AFU3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0472700 LjG1.1_chr3 88988511 88993915 +
2 domain predictions
2 GO terms
LotjaGi3g1v0472700.2
n.a. 5'-3' exoribonuclease; TAIR: AT1G75660.1 5'-3' exoribonuclease 3; Swiss-Prot: sp|Q9FQ03|XRN3_ARATH 5'-3' exoribonuclease 3; TrEMBL-Plants: tr|V7AFU3|V7AFU3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0472700 LjG1.1_chr3 88988511 88993915 +
2 domain predictions
2 GO terms
LotjaGi5g1v0007100.1
n.a. 5'-3' exoribonuclease 3; TAIR: AT1G75660.1 5'-3' exoribonuclease 3; Swiss-Prot: sp|Q9FQ03|XRN3_ARATH 5'-3' exoribonuclease 3; TrEMBL-Plants: tr|I1MY22|I1MY22_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0007100 LjG1.1_chr5 1548227 1562036 -
2 domain predictions
2 GO terms
LotjaGi5g1v0007100.2
n.a. 5'-3' exoribonuclease 3; TAIR: AT1G75660.1 5'-3' exoribonuclease 3; Swiss-Prot: sp|Q9FQ03|XRN3_ARATH 5'-3' exoribonuclease 3; TrEMBL-Plants: tr|A0A0B2PTI7|A0A0B2PTI7_GLYSO 5'-3' exoribonuclease 3; Found in the gene: LotjaGi5g1v0007100 LjG1.1_chr5 1549921 1562030 -
2 domain predictions
2 GO terms
LotjaGi5g1v0214900.1
n.a. 5'-3' exoribonuclease; TAIR: AT1G54490.2 exoribonuclease 4; Swiss-Prot: sp|Q9FQ04|XRN4_ARATH 5'-3' exoribonuclease 4; TrEMBL-Plants: tr|I1NIU3|I1NIU3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0214900 LjG1.1_chr5 52030097 52040920 -
2 domain predictions
2 GO terms
LotjaGi5g1v0214900.2
n.a. 5'-3' exoribonuclease; TAIR: AT1G54490.1 exoribonuclease 4; Swiss-Prot: sp|Q9FQ04|XRN4_ARATH 5'-3' exoribonuclease 4; TrEMBL-Plants: tr|I1NIU3|I1NIU3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0214900 LjG1.1_chr5 52030097 52040920 -
2 domain predictions
2 GO terms