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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0279609 |
| Transcript ID | Lj0g3v0279609.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max] gi|356576739|ref|XP_003556487.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 5 | 679 | 675 | 0 | ||
| PANTHER | 5 | 679 | 675 | 0 | – | |
| Pfam | 35 | 246 | 212 | 1.20E-88 | ||
| Coils | 111 | 131 | 21 | – | – | |
| MobiDBLite | 130 | 151 | 22 | – | – | |
| SUPERFAMILY | 252 | 277 | 26 | 6.28E-07 | ||
| Gene3D | 253 | 272 | 20 | 1.40E-05 | ||
| ProSiteProfiles | 256 | 271 | 16 | 10.18 | ||
| SMART | 256 | 272 | 17 | 1.60E-04 | ||
| Pfam | 256 | 270 | 15 | 5.80E-06 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Molecular function | Exonuclease activity | Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end. | ||
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. |
Expression pattern of Lj0g3v0279609.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0279609.2, powered by CORGI.
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