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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0007100 |
| Transcript ID | LotjaGi5g1v0007100.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 5'-3' exoribonuclease 3; TAIR: AT1G75660.1 5'-3' exoribonuclease 3; Swiss-Prot: sp|Q9FQ03|XRN3_ARATH 5'-3' exoribonuclease 3; TrEMBL-Plants: tr|A0A0B2PTI7|A0A0B2PTI7_GLYSO 5'-3' exoribonuclease 3; Found in the gene: LotjaGi5g1v0007100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:1549921..1562030) extracted from Lotus japonicus Gifu genome v1.2.
AAAATAAATATCTAGCGGCGTATGCCTAGGGTACTTCCTCTAGAAAAAGGTGTGTGACGATATGATATTCACAAACCTAA ACCGCTAAGTCGGTTTGTATTTGCAGAAAGAGGCTTCCATTTCACTGTTGAATTTGAAAAGGGTAATATTGTCCCGTTAT TATTCACCCTAACACACACACACACACGCAAGTGGTTGATACAGAAACAGAGATAGGTCCCGCCGCAGCAGAATCGTTAA TTGCACTCTGTTCGGCATATTCTCTCGAATTTGGGATCTGAGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATGGGA GTTCCGGCGTTCTACCGGTGGCTGGCGGAGAAATATCCCATGGTAATCGTCGACGCCGTGGAGGAGGAGCCTGTGGAAAT CGAAGGCGTTCAAATCCCCGTCGACACCAGCAAGCGAAACCCTAACAACATCGAATACGATAACCTCTATCTCGACATGA ACGGCATCATTCACCCTTGCTTCCACCCCGAAGATAGGGTAACTATTTCTCTTTGTTTTTGTATTTTCGGATTCTGAAAT TCAAAATTGTGAACGAGTTTTCACGTTGTTGTTTGTTTGAATTGCAGCCATCTCCTACCTCTTTCGATGAGGTGTTTGAG TGTATGTTTGATTACATTGATAGGCTATTTGTCATAGTTCGGCCTCGGAAGCTGCTCTACATGGCTATTGGTTTGTGTTT TCTTAGTTTTGATTTGTGTGAATTTGCTTGCTCTGTTTGTGATTGGTGGTGGTTAATTGTTAATTATGTTTTTGGCGGTT TGGATTTGAAGACGGTGTTGCGCCGAGGGCTAAGATGAATCAGCAACGTTCGAGGCGGTTTAGGTCAGCCAAAGACGCAT CTGATGCGGTATGTTTGTGCTCGATGTTTACATTCGTTAATTTTTGGTGTGGTTTGAACTGTTTTGGATACACTCATTGG GGTGAATTGTTTGTAGTTCAGATTATTACAGAACATTCTAACATATGCTCCAATACTGTTGAATGTCATGCAGTAATAGT TGATATTGGAAAGCTTTAACTGCAAAATTGACTTATTACTGTTGAATATTGAAGTATTTAATACTCTGGTCTTGGATATT TGCATACTGCGTTTTTTACTCAGGGGACGTCAGTGTATTAGTATATTTGGGAGATAGTGCTAGTATAAATCCTTTCATAA TAATTTCTGGGACGTCGTGTATAGTATAAACTCTTTGTATTCCTGGCTTTGTGATTACTATTGTTGTGTGCTTATCTTAC TTAGCTTATGTACATGTTTGCAACTTTCATCTCTCTGGAAAATGATTAAATATTTGAAAAGATACATTGATGGATATGAT TTGCCCTTGTCTGTCTGCTTTTCTCTTGTGTGAGATAGGCTGCTGAAGAAGCAAGGTTAAGGGAGGAATTTGAGAGGGAG GGCAGAAAGCTTCCTCCAAAAGAAGAGTCGCAGGTCTTCGATTCGAATGTCATTACACCTGGAACTGAATTTATGGCTGT TTTGTCGATTGCACTTCAGTACTATGTTCATCTTAGGTTGAACAATGATCCTGGTTGGAAAAATATTAAGGTAGAGAGTC ATTGTATCTTAAATTGTATGGCTACAGCATATGCGTCTCGATGGAGCGGAAAATCTTAACACCATGTTTATTTCTGAAGG TTATTCTTTCTGATGCAAATGTCCCTGGCGAAGGGGAGCATAAGATTATGTCCTATATTCGCTTGCAAAGAAATCTTAAA GGCTATGATCCAAATACACGACATTGCCTGTATGGTTTGGTATATATCTTCCAATAATTTGTTTTTCTTGAAAATTCATT TTCCTTTTGACTTCCACACAATGCCTGCTTGTTCTTATCATTTCGGGTCCTGTGACAGGATGCTGATTTGATTATGTTGG CTCTGGCTACCCATGAAGTCCATTTCTCAATTCTTAGGGAGGTTTGTGTCTACTGAGATTTATTTGAGTCTCTCATTTAG AGCATATCAGGATATTAAAATAATCACATGATGTTAATAGTGAAAAATGATTGTTATTAATGCATTATGCATATGCAATA TTTTTGGCTTCTTTCTACCAGGCTTTACATTGGTAAATAATTGGTTTTTGCAGGTTGTATTTACTCCTGGACAAGACAAA TGCTTCATATGTGGCCAAATGGGTCATATGGCTGCAGCCTGTGAAGGAAAGGCAAAAAGGAAAGCAGGAGAGTTTGATGA AAAAGGAGATGCTAATGTGGCTAAAAAACCCTACCAGGTCAGGATCAGGGATAAATAATGTAATACGTATGTCGTATAGT TTTTTTATAGTACAACAACTATATCCAAGCTGTTTGCCTCTAGGTGGGGTTGGCCTTGGAAGTATGGAACAATAGAGTGT TGGTTCTTCAGTCCATGATTCTCACTTTTGTTCATATCTTTTGTAGTTTCTAAATATTTGGGTTCTGAGGGAATATCTGG AATATGAGATGAGAATGCCTAATGTTCCATTCAAGATTGATTTTGAACGCATTGTGGATGATTTTATCTTCATCTGTTTT TTTGTCGGCAATGATTTCCTACCACATATGCCTACTTTAGAAATTCGTGAGGTATGTTATTCTAGACCTGTTGTTCTTTT CGTCTGTCTTTTCTATTTTGTATGTAGTTGGCAAATCATATTTTAGGACTGCTCTTGGAAATTCTGGCTATGACAAAAAA TTTAAGCTGTTGGAGGTACATAAATGGTTTAATATCTTTAATAGGCTTTCTCATATGTAACACTTTGGGCTTGAAACTGA AAACTGAAATAGTGCAAGCCCTCTGTACCTTGTGCTCAAATTCGATATAATGTGTAGAATGTTGATTGCTGGGGGTCAGA CTGCTAACCAAGTGGTTGATAGGTACCAGAAGAAAATAAGAAGGAAAAGGGAATTGAAATGTTATAGTATTGATTTGTTC TAGAAACTGAGAAATTCTCAGGTCCAGTTTAGGAAAATTCAAGAAGAAAGAAAGAACTGATACAGGCAAAATCGAGCATG CCTATCCCTTTTACCCCTTCTAACATACACTTTTAGTAATCAGGGAAATTCTACATCAGGGGTCAAGGAAGATTTTACAG TGTAGGATACTAGGATTAGGTACCAACTACCCAAAAGCTCATCCTTTTTATATTTCAACATGGAAATAAAGTCTGAAGTG AGGCTCGAAACTTGCATGCATTTTTTAGTCAAACTTTTATATGGTATGAATAAGTTTTAACTTGTAACAGACTGAGGGAT ATATTATTTACTTAATAAAAAACTGAAAGCAAATAAGCAATACATGTCTTATATAAAATACATTACTTACTAACCAATCC AGCAAGTAACTTCATATCCTAAATCATAATAACCAAACCTGTTATTATTCTAGCCTCTATCTAATTGCATTATATCACTA TCTATTAGCTAGGTTAATATTTGAATTAAATCCACAATAAATCTGACAAGCCAGAGTATCAGTTCCTTTTAGTGTTATTA GTGGTTTCTTTATTACAAGTCTTGAGAATGTAATTTTTTATTCTAGCCCCAGTAATTCTCGGTATGTTAACCAATTTAGA TAAAAAGTTATGGTGAAAGTTGTTCTATTTTTGTATGACATAATTCATTGCCTAATAATCTTGTAAGTACAGAGAAATGG ATGAGAATCAATTTCCGCCCTCTAAATTTGATGAATTGTCACTTTGTCAGAATATCATGGCAAGAGAGAAGTCATAATAT TTGACATATTTTTAAAACTGTTAATTTAGTTTGATGTTTGAATATATCTATAGGTTTATCTGTTACGATATTGGCCATCT ATCATCTGATGGGAGTGTAATTTTTTTATGCTGATTTAGGTTATGTAACTGATGTATTTTTTGCAAATTTCATTATTTTC AAATAGGGTGCAATTAACTTGTTGATGGCAGTATACAAGAAGGAACTTGGGGCAATGGGTGGTTATTTAACTGATGGAAG CAAGGTACTTGATGGTAATTTGGGTTGATATATTCCATGTGCCATGTGGTATGCTTTGTTGCTTTTCATCTTAATAACTT TGTGTGTAATTTGTCTCTTTCCCCCCGCATTTCACAGCCAAATTTGAGCAGGGTGGAACATTTTATTCAGGCTGTTGGAT CTTATGAAGATACAATATTCCAGAAAAGAGCTAGATTGCATCAGGTCTGTCATCATTACTCATGTCTTGTATGATCTTAA AGATGTAAAGAAGTTAACCCTAAGGCTTTGGTATGCTAGCATTTAAAATTGTCAAGTGGTCTGGCTGCATGATATGGAAA TTTACATTATTCAGATTTTTTTCATGATTATATTGTAACACCAAATGTGGTTCACGCTAGATATTGCCATTTACCATTGT ATCTAGTTGCATTTCTTTCCCCTATATTAGGAAAGGTAGAGTAGGCACCATCAGTTTATACCAGTGGCTGTGTGTGTCAC ACCGCCATTGCAGGAGAGTGGGTGTTCATTGTGTTACTTTCTCACATTTTCTGTCCTGGTAGTATATAAATAGAATAATG TTCGAAACAGAGTGACAGACAAATGTTTATACCCGTATGTAGTTTATCTTGTTCTTAGAAAGTTATTTTGACTGTATCTG AAGTGATTCTTCCTGTGTTTATTGTTGTCTCTTCAGCGACAAGCAGAAAGAATTAAGCGTCAAAAGGCACAAGCAAGAGG AGATGATGCTCAACCTCAAGCTCAACCTGAGACTCTTGTTGCAATTTCAAAATTCCATGGTTCTCGTCTGGCTTCAGCTC CAACGCCTTCACCATTTCAAGCACCTGGGCGGTATGATTCTCATGCGTCTGCATCAGTTAGAAAAGGCAATAAAGAAGTC TTTGAGAAGCCCCCTAAAGCTGCTAGGTTGTCTTCCGGAGCATCTGTTGCTGCTGCCATTGTTGAAGCTGAGAATAGTCT TGAAATAGATGTACGTTTTCCTGCTTCTGGAGAGGCATTCTTTAGAACTAATATTTGGGCTAACCTACTAATGGGTATGA GCCTGGCATAGAGTTACATAAGCACTTTGTTATCTTGTTGCATCATTGTTATTCTAAGGGTCCTAATTGGGATATTATCT ATTTGTAGTTCATGCTTTGTAGCGTTCTTTTGCTTTTCAGATTCAAGATAACAAGGATGATTTGAAAACAAAGCTGAAGG AAATACTTCGAGAGAAATCTGATGTATTCAACTCAAAAACTACTGAAAAGGACAAGGTAAAGCCGTAAAGCATAGAATGC ATATAATTGAGTCAAGGGTTTTCATTCTTAAGACTTGGTCGTTAGACAAGTTAACTTCTGTATAAATGATAATCAAAAGA AATTGAAATGATTTAATTAAATAGGCAGTCCCTATTTTTGTCCAATCATGTTGGTCCCCACACTTCACATTTTTCAAATG AGACTTGATTGAACATTCAATATACAGAAAACATGAAAGCAATCTCTAAAATCTTAACCGATGCTTTTGAAATTTACAAT TTGCCTGAGTTATGAATGTGGAGTTATTCTTTACCTGCAAAGAATGGCTTTTGAATTTGGAGTGTTTAGAACTCCGCCTA TGTTTCCATAGCCGGTAAAGGAAGGAATGTTGTTTTAGGCCTTAAGTAGGCAACCTAAAACCAACTCACATCTTTAATAT GGATCAAACACGACAAGCGTCAAGTGATCCATATAGCTGACCTCACTTAGTTAGATAAGGCTTTGTTGTTATTTAACAAG TTAACTTCTGTATAAATGATAATCAAAAGAAATTGAAATGATTTAATTAAATAGGCAGTCCCTATTTTTGTCCAATCATG TTGGTCCCCACACTTCACATTTTTCAAATGAGACTTGATTGAACATTCAATATACAGAAAACATGAAAGCAATCTCTAAA ATCTTAACCGATGCTTTTGAAATTTACAATTTGCCTGAGTTATGAATGTGGAGTTATTCTTTACCTGCAAAGAATGGCTT TTGAATTTGGAGTGTTTAGAACTCCGCCTATGTTTCCATAGCCGGTAAAGGAAGGAATGTTGTTTTAGGCCTTAAGTAGG CAACCTAAAACCAACTCACATCTTTAATATGGATCAAACACGACAAGCGTCAAGTGATCCATATAGCTGACCTCACTTAG TTAGATAAGGCTTTGTTGTTATTTAATTGTGACCTATGCGATTTTTGTTTTTTCCCCCTAGTTATTCTAGGAAAAATACA AGTTGTGGAATACGTGGCCTGACACATAGTGGATCTGAGGCCCTTCTTGTGATGGAAGCTTAGGGCACCAAATCGTCCCT CTTTCTGTGGGACAATGACATTGATTTAATGCCTGCTTTTAATGAATATATGTGTTTGGATATTGTGAGTTGACAATATG TTATTAATGCACATGCTTTGTCTTAGTTGTACTACAATGATTTGGGTTGGCATTTGAAATTTGAAGTATTTAACAACATT TTTCTTTTTGGACGTAGACTGTAGCCTGGTATTTTAGAAGCATGATGTGTCTAAATGTAATGCATGCAACGTTCGTGCAT CACATTTTTAATGTAATTTCTCTTTATCTTGATTAGTTATTTCAATTAATTTTAGCTATTATTTCTTGTTTTAACAGATT AAGCTGGGAGAACCAGGCTGGAAAGAGAGGTATTATGAGGAAAAATTTTCTGCTAAAACTCTTGAGGAACTGGAAGCTAT ACGGAGAGATGTTGTACGTTAACAAATTGAATTGTTATTGGTTTTCGTTTACATAAAGGTCTAGGGTTTCTTATTGCAGT TTATTGTTTAGGTCTTGAAATACACTGAAGGTCTTTGTTGGGTGATGCACTATTATTACGAGGGTGTTTGTTCTTGGAAT TGGTAAGTCCCTTTTCTAATATTCTCTGCAGTGATAGCCGAACCATAAGTTGTGTTGGGTTTCCTTACCTTTGCATTCCT ATCAACTTGGTGAAAAAATGTGATAACCAAATGCTAGCTTTTTCTTTTATTCAATAGAAATTTATCGTTTCTTGCTTGCT AAGAACCTGTTCCTGACTAGCTCTTCAATTGTTTAACACTTTCACTGAAATTTCATTTTTGAACTTCTGATTTGGCATTT TCAGTGAAAGTTGGGTGTGTTAGATCCTTGGAGTCTATGTGCTATTATTAGAGTTTTCATAGCAATGTGGAATCTATGAA TTAGGCTAGAATTTGTGACAATATGTGAGATATTAGCTTTGATTTTTATTGACAGAATACAAGATCAGAGGCCTCTGTTG TAGGGATTGATATGAACTATTTGAAGTTATGCTTTCTTCAGATAATTGCCATATGGGTAAAAAGAATTTCAAAAATAATC ATGGATATCAACACTTAGCTATAATTTGGTGCATTTTGCTGGATTTTAACTATCTTTTGGTGGATTCGTTGGCAATATCA CTTTCGGGATCAATTTTGTTGTTTGGCATCTATTTTAAGTAAAGCACATGGCCTTTTTTATTCTGTTACTTAAGGAATAT ATTAAGAGATTGGGAAGCTTTGTTCTATTGATTTGATTTTTTTCCTGAGTTGTTTTATGTTTTGTTCTTGATTAGGATTA TTTATTATCCTCCTTGCCTCTGCCTCCCTTCATCTCAGTAAATTTTTTCTTTTATCAGAAATTTTGTTTTACGAGATGGA GGAGGAAAAGTACCACTATAATGAGAATAAGAATTTTCTTTATTTCCCCTGACTTGTGATGTTTATATATTTTTAGTTGC ATATTGCATCCCAAGGCTTGTTTCTTGTTTACAATTTTTATTATTTCTTTCTTGGTGCAAAACAGGTTTTATCCTTATCA TTATGCTCCCTTTGCGTCTGATCTCACGGGCCTTGGTGAGCTTAATATTAGCTTTAATCCGGGTACTCCGTTCAAACCAT TTGATCAGCTTCTAGGGGTTTTTCCTGCTGCAAGGTTTGCTTGTTATCATTTCTAGTTTCGTAAAAGTTTATAACTTCCT AAACTTCAGTTGCGGTAACTTGGAAACAATGAATCACTGCAGCTCTCATGCACTTCCTGAGCCATATAGGAAACTTATGA CAGATCCCAACTCACCAATTATTGATTTTTATCCACTTGGTATGTTTTTAATGAACTGTCGTATTGAAAACAAGTTTTAG AACTTTCACCGTATTGTGTGTATATTTAATATTGATTTTATGTCAGATTTTGATGTGGACATGAATGGCAAACGCTTTGC CTGGCAGGTGTGCTCCTCATTTTCGTTTGTTTTCTTACCCTTGGTGTTCTTTAACCTGACAGCAAACTTATTTTATAATA TAATCCTTCCATTTTGTAGGGTATCGCGAAGTTGCCTTTTATTGATGAAACACGTCTTCTTACGGAAGTTCGGAAAATTG AAAACTTGTTAACAGTATATCTCTGTCTTCCATTAAGTTTTAATGCACTTTTGTTTTGTTTGTCGTTCTATACTCCCTCC CTCCCATCATATACTGATTTTAGTTTGTATTTTGTTGATAACTTATCTCTCTATTAAAATAGCCGGAGGAAAAGCGACGA AATGCTGTGATGTTCGACTTGCTTTTTGTGAATTCCTGTCATCCTCTATCTGCATGCATAAGTACACTTGACAACAAATG CAGAAACATGTCAAACAATGAACGTGCTGAGGTCAAGGAAAAAATCGATCCCATGGAAAGGTTGGTGCATAATGTGTTGT ATCTGATGGGTTGTGTGTTAGTAATCTTTCGGGTTCTTTTTAGAAATGGCTCAGTATGTTTATAAGATCAGAACTTAGCG TTGTCATTTAACGCTACATTAAAGTCTATGATAACTGATCAAAACGTGGGTTTAGAATTAGATTATTAGTTTTGGTTAAA CAAAGAGTGATGAAATTCTTAGAAGACAGAATCAGAGCGAGAGAGAATTCTGAAATCTGATTTTTATTAGTTATCAATAA TCTAATCTAATGATACAATATAAATATCTATATATAGACTTGGTACTCGAACATATTACAATTGCTAACAGCTGTCAACA ACTAGCTCTAACTGAATGACAGCTGGTGACTTATCATGTGAATGCAGAAGCTAGCTCTACTCCTTATCACACACATTACA TTAACTAGCTAGCTACAATGCATAAACAAACTCAAGTGAAATAGTTACTCTAATCCAGACAGTGGAGCATGCTATTAGTG TTAACCAAAATGCTGCTGAATTGCTATTTCAGTCCACAGTTAATTCGTTAAAGATCGGAAATGGGGTTAATTTTGTGTAC ATGGCTGTGGGAACCATGGCTAACCTTTTTGAACAATACCTGTCCTTTGTATCGGTGCTAGACCATAAGTAAATTTATCT ACTGGGCTGTTAATATTTAGATGTGCCATATAATTGGGTGACCGGTATAATTTGAAAGTGTTTGTGGTTTTTGTAGCATG TTTTAAATAACAAACATGTTATTCGGTTAGTATAGAATCAACTCTTAGAACATGCAGATGGTGATAATGTTTTTTTACTA AACACAAGCAGAATGGCAGCTTGTTGATGTATCACTTTGCATGAAATTAGAAATTTTGTTTACTTCATTTTTCTGATGTT ATTTAGGTATACATGCAGTGATGGAATGAATGGTTACATATCCTTGTGTGCTGGTGAACCTTGCCCTCCTATCTTTAGGT CTCCTGTTACAAGCATGGAAGATATCATGGACAACCATGTCATGTAAGTCTGTTCAATTTGGGGTTTAATTAATAAGACC ATTATTTATAATCATGGATCTGAAAATTGATGCAATTCTTTCTGTTTGCCGTTTCATGCCCTGGTGCTCAGATGTGCAAT TTATAGACTCCCAGATGCGCATAATCACATTGCCCGACCACCAGAGGGAGTTAAATTTCCAAAAAAGGTATTAAATATTC TAGCTGCTTCGTATTTATTTTTCTTTGAACTCCCAGGTTTCTCTTCCTGATTTTGTTCAATTTCAACTGTTTACTGGTTA AGACTCTGGTATGGTTACCTTAGCACGTTGTGTTTCATCTGCTTTTACGGTTCAATATATAGGCAGAAAATTAAATCATG TGCCTTTTTTACAGATCGTGACAGTTGGGGATCTACAACCTGAACCTGTTTTGTGGCATGAAGATTCTGGTAGGAGGAGA TATGAGGATAGTCGGAGGTAAGGCTTTGGCTTATTTATATTAGACTAAAAGACTTTGTTAAATTTGTGATTCATAGTTGG ATTGCATTCAACATCTTGCCAGCTAGCCTGGAGGGTCCTCGTTGAAATTGTGTTTATCTTATTAAATACTCCCTCCGTCC CTATATATTGTCACTTTAAGGTTTTGACACATATATTAAAAAGTAAGTAGTATTAATGTCCTTGTTTTTGTTAAAATTAT TACTAACTTCCTAATATACCATTTATCTCTTATTAATTGACTCTTTACCATTAAAAATTATCTGCGTTATTGGTAAGAAA TAATCAATGCTCTCTTGAAGCTACAAAAGTGGCATATAAATAGGAACATAAATACTCTCAAAATAGTGACAGATATTAAG GAACAGAGGGAGTAGGTGGAAGGGACCGCTGATTAGTTATGAAGAGAGAGATTGACACAATGTTTCACTTGATATTGTCA TTTTGACATGAGAGGATCCTAATGTGGCTAAAATTGTGACTAAGCTTTGGTTTTCTATTTCAGGAAAAACCCTCCAGGAT CTATTTCTGGTCGGGAGCTTGGAGAGGCAGCACATAGACTGGTTGTCAATTCCTTACAGGTCAAGGTTGATGAAAATGGT TACCGTCGTCCTGCAAATGGACCCCCCATGTCTTATGCTGCACCAATGGGTCATCAGCAACCATTGCCTTCCTATGGTTA TGAATCGCGCCCAGGATATATTGCAAGACCGCCACCTCTGTCAGCTCCACCCGTCCACGGTCAACCACCGTACATACCTT ATAATGCTGCACCACTTTTGTTAGCTGCAGCTATCCTAGGTCAACAACCGTACGTACCTTATAATGCTGTCCCTGCAGCT CCGCCATATGGTTATAACCAACCACACCCACCGCATATGGTGTATGATCCTGTTCAATCAAATTCTTATGAAGGAAATGA TCATCAACACCCTATATCACATCCTTATGTAAGAAATGATCATCAACCGAGAGGAGGAAGTGCAAGGCATAGATACAATT CACAAGGTGCATATGCTAGTCAGCATCACGAATATCCTAGTCAGCATGGTCGCCACCAGAACTGGACTCCCCGGAGTAAC CCCAGTGGCCCTAGGGGATCTGGTCAACATTCGACCAATCAATACGCTCATTTAGATAGAAGAGCAAACAGGAAGCCAAT GCCACCACCTGATTATAGTCGCAGGTAAATTATTTCAGTGGAGTATTTCACCCTGCTTAATGAAACTGTTGTACTTGTAC CATATCTTCTCCCTTTTCTTGAAGCTTGTTAGACATACTAGTGATTTCTGTTCATTATTCATAAACGCCTAAATGTTTGA TAGTTTAACACCCTCCCAAATCTACATTGGATAGAGGAATAGTTAAATTATAACCCTGGAACTCAGGTTCGATAATATTT TTGATGTAATAGGAAATTCTATTTGTGTTATTTGTCCATTGAGGCTCGATTTTAAAGCAATTATGCTTTTATTTCCAGCC CATCAAGTGGCAATTCTAATGTTCTACGATTGGTTCATGGATGGGTAATTTGAGTATGATAAACAGTGCCTATTTATGTT TACTGGAATATCTCAGGTCTGCTTATTTAATCACATTTTGTTAATTTATTTCGAATTCAATAGGCAATTGGCTCATCTAG TTATTTACTTACAACTGTATATACTTCTCATTCAATCACCATTGGAAAGAATATCCAAGGCAGCAGTATGTTGAATATAG GCAGCCGTTTCTTCAATCTGAAAACAATTAGGATTCAATGAAACAAAGTTAGAGAAACAATGATCAACTCGATTTGCCTC ATGCTGGGAATGAGTAATAAATTAAGTTTTAAAATTGCTATTATTTTGATACAATGAAAACAATTAGGCTTAAATATGCT TGAGGTCCCTTTAAAATAAGGGTATTTCGG
CDS sequence (LotjaGi5g1v0007100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAGTTCCGGCGTTCTACCGGTGGCTGGCGGAGAAATATCCCATGGTAATCGTCGACGCCGTGGAGGAGGAGCCTGT GGAAATCGAAGGCGTTCAAATCCCCGTCGACACCAGCAAGCGAAACCCTAACAACATCGAATACGATAACCTCTATCTCG ACATGAACGGCATCATTCACCCTTGCTTCCACCCCGAAGATAGGCCATCTCCTACCTCTTTCGATGAGGTGTTTGAGTGT ATGTTTGATTACATTGATAGGCTATTTGTCATAGTTCGGCCTCGGAAGCTGCTCTACATGGCTATTGACGGTGTTGCGCC GAGGGCTAAGATGAATCAGCAACGTTCGAGGCGGTTTAGGTCAGCCAAAGACGCATCTGATGCGGCTGCTGAAGAAGCAA GGTTAAGGGAGGAATTTGAGAGGGAGGGCAGAAAGCTTCCTCCAAAAGAAGAGTCGCAGGTCTTCGATTCGAATGTCATT ACACCTGGAACTGAATTTATGGCTGTTTTGTCGATTGCACTTCAGTACTATGTTCATCTTAGGTTGAACAATGATCCTGG TTGGAAAAATATTAAGGTTATTCTTTCTGATGCAAATGTCCCTGGCGAAGGGGAGCATAAGATTATGTCCTATATTCGCT TGCAAAGAAATCTTAAAGGCTATGATCCAAATACACGACATTGCCTGTATGGTTTGGATGCTGATTTGATTATGTTGGCT CTGGCTACCCATGAAGTCCATTTCTCAATTCTTAGGGAGGTTGTATTTACTCCTGGACAAGACAAATGCTTCATATGTGG CCAAATGGGTCATATGGCTGCAGCCTGTGAAGGAAAGGCAAAAAGGAAAGCAGGAGAGTTTGATGAAAAAGGAGATGCTA ATGTGGCTAAAAAACCCTACCAGTTTCTAAATATTTGGGTTCTGAGGGAATATCTGGAATATGAGATGAGAATGCCTAAT GTTCCATTCAAGATTGATTTTGAACGCATTGTGGATGATTTTATCTTCATCTGTTTTTTTGTCGGCAATGATTTCCTACC ACATATGCCTACTTTAGAAATTCGTGAGGGTGCAATTAACTTGTTGATGGCAGTATACAAGAAGGAACTTGGGGCAATGG GTGGTTATTTAACTGATGGAAGCAAGCCAAATTTGAGCAGGGTGGAACATTTTATTCAGGCTGTTGGATCTTATGAAGAT ACAATATTCCAGAAAAGAGCTAGATTGCATCAGCGACAAGCAGAAAGAATTAAGCGTCAAAAGGCACAAGCAAGAGGAGA TGATGCTCAACCTCAAGCTCAACCTGAGACTCTTGTTGCAATTTCAAAATTCCATGGTTCTCGTCTGGCTTCAGCTCCAA CGCCTTCACCATTTCAAGCACCTGGGCGGTATGATTCTCATGCGTCTGCATCAGTTAGAAAAGGCAATAAAGAAGTCTTT GAGAAGCCCCCTAAAGCTGCTAGGTTGTCTTCCGGAGCATCTGTTGCTGCTGCCATTGTTGAAGCTGAGAATAGTCTTGA AATAGATATTCAAGATAACAAGGATGATTTGAAAACAAAGCTGAAGGAAATACTTCGAGAGAAATCTGATGTATTCAACT CAAAAACTACTGAAAAGGACAAGATTAAGCTGGGAGAACCAGGCTGGAAAGAGAGGTATTATGAGGAAAAATTTTCTGCT AAAACTCTTGAGGAACTGGAAGCTATACGGAGAGATGTTGTCTTGAAATACACTGAAGGTCTTTGTTGGGTGATGCACTA TTATTACGAGGGTGTTTGTTCTTGGAATTGGTTTTATCCTTATCATTATGCTCCCTTTGCGTCTGATCTCACGGGCCTTG GTGAGCTTAATATTAGCTTTAATCCGGGTACTCCGTTCAAACCATTTGATCAGCTTCTAGGGGTTTTTCCTGCTGCAAGC TCTCATGCACTTCCTGAGCCATATAGGAAACTTATGACAGATCCCAACTCACCAATTATTGATTTTTATCCACTTGATTT TGATGTGGACATGAATGGCAAACGCTTTGCCTGGCAGGGTATCGCGAAGTTGCCTTTTATTGATGAAACACGTCTTCTTA CGGAAGTTCGGAAAATTGAAAACTTGTTAACACCGGAGGAAAAGCGACGAAATGCTGTGATGTTCGACTTGCTTTTTGTG AATTCCTGTCATCCTCTATCTGCATGCATAAGTACACTTGACAACAAATGCAGAAACATGTCAAACAATGAACGTGCTGA GGTCAAGGAAAAAATCGATCCCATGGAAAGGTATACATGCAGTGATGGAATGAATGGTTACATATCCTTGTGTGCTGGTG AACCTTGCCCTCCTATCTTTAGGTCTCCTGTTACAAGCATGGAAGATATCATGGACAACCATGTCATATGTGCAATTTAT AGACTCCCAGATGCGCATAATCACATTGCCCGACCACCAGAGGGAGTTAAATTTCCAAAAAAGATCGTGACAGTTGGGGA TCTACAACCTGAACCTGTTTTGTGGCATGAAGATTCTGGTAGGAGGAGATATGAGGATAGTCGGAGGAAAAACCCTCCAG GATCTATTTCTGGTCGGGAGCTTGGAGAGGCAGCACATAGACTGGTTGTCAATTCCTTACAGGTCAAGGTTGATGAAAAT GGTTACCGTCGTCCTGCAAATGGACCCCCCATGTCTTATGCTGCACCAATGGGTCATCAGCAACCATTGCCTTCCTATGG TTATGAATCGCGCCCAGGATATATTGCAAGACCGCCACCTCTGTCAGCTCCACCCGTCCACGGTCAACCACCGTACATAC CTTATAATGCTGCACCACTTTTGTTAGCTGCAGCTATCCTAGGTCAACAACCGTACGTACCTTATAATGCTGTCCCTGCA GCTCCGCCATATGGTTATAACCAACCACACCCACCGCATATGGTGTATGATCCTGTTCAATCAAATTCTTATGAAGGAAA TGATCATCAACACCCTATATCACATCCTTATGTAAGAAATGATCATCAACCGAGAGGAGGAAGTGCAAGGCATAGATACA ATTCACAAGGTGCATATGCTAGTCAGCATCACGAATATCCTAGTCAGCATGGTCGCCACCAGAACTGGACTCCCCGGAGT AACCCCAGTGGCCCTAGGGGATCTGGTCAACATTCGACCAATCAATACGCTCATTTAGATAGAAGAGCAAACAGGAAGCC AATGCCACCACCTGATTATAGTCGCAGGTAA
Protein sequence (LotjaGi5g1v0007100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGVPAFYRWLAEKYPMVIVDAVEEEPVEIEGVQIPVDTSKRNPNNIEYDNLYLDMNGIIHPCFHPEDRPSPTSFDEVFEC MFDYIDRLFVIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRSAKDASDAAAEEARLREEFEREGRKLPPKEESQVFDSNVI TPGTEFMAVLSIALQYYVHLRLNNDPGWKNIKVILSDANVPGEGEHKIMSYIRLQRNLKGYDPNTRHCLYGLDADLIMLA LATHEVHFSILREVVFTPGQDKCFICGQMGHMAAACEGKAKRKAGEFDEKGDANVAKKPYQFLNIWVLREYLEYEMRMPN VPFKIDFERIVDDFIFICFFVGNDFLPHMPTLEIREGAINLLMAVYKKELGAMGGYLTDGSKPNLSRVEHFIQAVGSYED TIFQKRARLHQRQAERIKRQKAQARGDDAQPQAQPETLVAISKFHGSRLASAPTPSPFQAPGRYDSHASASVRKGNKEVF EKPPKAARLSSGASVAAAIVEAENSLEIDIQDNKDDLKTKLKEILREKSDVFNSKTTEKDKIKLGEPGWKERYYEEKFSA KTLEELEAIRRDVVLKYTEGLCWVMHYYYEGVCSWNWFYPYHYAPFASDLTGLGELNISFNPGTPFKPFDQLLGVFPAAS SHALPEPYRKLMTDPNSPIIDFYPLDFDVDMNGKRFAWQGIAKLPFIDETRLLTEVRKIENLLTPEEKRRNAVMFDLLFV NSCHPLSACISTLDNKCRNMSNNERAEVKEKIDPMERYTCSDGMNGYISLCAGEPCPPIFRSPVTSMEDIMDNHVICAIY RLPDAHNHIARPPEGVKFPKKIVTVGDLQPEPVLWHEDSGRRRYEDSRRKNPPGSISGRELGEAAHRLVVNSLQVKVDEN GYRRPANGPPMSYAAPMGHQQPLPSYGYESRPGYIARPPPLSAPPVHGQPPYIPYNAAPLLLAAAILGQQPYVPYNAVPA APPYGYNQPHPPHMVYDPVQSNSYEGNDHQHPISHPYVRNDHQPRGGSARHRYNSQGAYASQHHEYPSQHGRHQNWTPRS NPSGPRGSGQHSTNQYAHLDRRANRKPMPPPDYSRR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 136 | 136 | 2.5E-41 | – | |
| Pfam | 1 | 253 | 253 | 3.3E-99 | ||
| PIRSF | 1 | 914 | 914 | 0.0 | ||
| PANTHER | 1 | 1034 | 1034 | 0.0 | ||
| PANTHER | 1 | 1034 | 1034 | 0.0 | – | |
| CDD | 51 | 312 | 262 | 4.36227E-146 | – | |
| MobiDBLite | 113 | 152 | 40 | - | – | |
| MobiDBLite | 117 | 151 | 35 | - | – | |
| Coils | 122 | 142 | 21 | - | – | |
| Gene3D | 154 | 348 | 195 | 2.7E-52 | – | |
| SUPERFAMILY | 258 | 283 | 26 | 3.14E-5 | ||
| Pfam | 262 | 276 | 15 | 3.7E-4 | ||
| SMART | 262 | 278 | 17 | 0.0068 | ||
| ProSiteProfiles | 262 | 276 | 15 | 9.224 | ||
| Pfam | 324 | 828 | 505 | 9.5E-170 | ||
| Coils | 407 | 427 | 21 | - | – | |
| MobiDBLite | 450 | 484 | 35 | - | – | |
| MobiDBLite | 470 | 484 | 15 | - | – | |
| Coils | 507 | 527 | 21 | - | – | |
| Gene3D | 617 | 713 | 97 | 1.7E-33 | – | |
| MobiDBLite | 837 | 853 | 17 | - | – | |
| MobiDBLite | 837 | 861 | 25 | - | – | |
| PIRSF | 948 | 1072 | 125 | 130.0 | ||
| MobiDBLite | 969 | 1076 | 108 | - | – | |
| MobiDBLite | 992 | 1008 | 17 | - | – | |
| MobiDBLite | 1031 | 1057 | 27 | - | – | |
| MobiDBLite | 1058 | 1076 | 19 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Molecular function | Exonuclease activity | Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end. | ||
| Molecular function | 5'-3' exoribonuclease activity | Catalysis of the sequential cleavage of mononucleotides from a free 5' terminus of an RNA molecule. | ||
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. | ||
| Biological process | Nucleobase-containing compound metabolic process | Any cellular metabolic process involving nucleobases, nucleosides, nucleotides and nucleic acids. | ||
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. |
Expression pattern of LotjaGi5g1v0007100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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