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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0214900 |
| Transcript ID | LotjaGi5g1v0214900.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 5'-3' exoribonuclease; TAIR: AT1G54490.1 exoribonuclease 4; Swiss-Prot: sp|Q9FQ04|XRN4_ARATH 5'-3' exoribonuclease 4; TrEMBL-Plants: tr|I1NIU3|I1NIU3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0214900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:52030097..52040920) extracted from Lotus japonicus Gifu genome v1.2.
TTTCGGGTTCAATCCCCACACAATACACTATGGGTTGAGAAATGATGAACCTTAATTGTAACTAAATCTTGAATCTGATG GCATCCGAAGGGTGACGGGATGTTTATAAATAAAAATAACTTACATAAAAATATCATTTATATTTACCTCTTGTAGTTTT ATATACAGAACATCTGGGGAAGACAAATTGAATGAAGTACTAGAACTGTACCGACAAGTCGTCCCAGATTCCGAACAGCG CCGTAATTATGGGAGTGCCAGCGTTTTACCGGTGGCTCGCCGACCGCTACCCGCTCTCGATCTCCGATGTACTGGAGGAC GAACCCGCCGTCGTCGGCGACGGCGTTCACCTCCCAATCGACCTGACAAAACCCAACCCCAACGGCATGGAGTTCGACAA CCTGTACCTGGACATGAACGGCATCGTTCACCCTTGTTTTCACCCTGATGGCAAGGTGCGTGCGGCTCGAATTTTCTGAA TTCAATTCGATTTACTGTTGCATAATGTGGTTATTGATTGAACTGGAGTTTCTGATTCCTTTGATTATTGATTCTTTTGA ATGCAGCCAGCACCTGCTACCTATGATGATGTGTTCAAATCCATATTTGACTATGTTGACCATCTCTTCTCGTTGGTTCG TCCAAGGAAGCTTCTCTACCTTGCAATTGGTATGAATTCTCATTGTGATTTTGGAGCTAAAGGAGTGTATTGACATCTAG CAGTTTGGTTCTCAAAACCCTTTTTCTGTTTCTTTTCTTTTCTGGATTTTATTGAACAAAAAAACAAACTACCCCATATC CAATTTTCAGAATGCTACAATCTATTTTGTTAGTCTGCGATGTTAAGAGTCTTAGTTCTATAGCGTTTAGGCCTCCTTTG GAAGAGCTTATTTGAGCTTATCTGATAGCATAAGCGCTTATGTCAATGTTTGGCAGAGCATATGCAAACAGCTTACGGCC TACCAAAAGCTGTTTTGAGCTTATTTTCATAAGCTACTCAGGATAGCTTATGAAAAAGCGCTTATGCTTTAAGCGTTTAA TTAAGCTGTTTTCCCAAACGGGACCTAATCTTCAAACTGATAATTCCCTGCTTCTGTTTTTACTTTAAACCACTTTCATC ATTTTACCTGTTTCAGAAAGCTACTATCTTTTTTTGTTAGTCTGCAGTGTTAAGAGTCTTAGTTAGTTCTATTGCGCTTA ATCTTCAAACTGATAATTCTCTGCTTCTGTTTTTACTTTAAACCACTTTCATCATTTCGCCTGTTTCTTTTCACATGTAC TTTTGTTGCCCCTTAAGCTTTTTCCATTTGTTTCTTTACTTTGAAATTTTCAGATGGTGTTGCGCCGAGGGCCAAAATGA ATCAGCAACGTTCTCGGCGTTTCCGTGCTGCCAAGGAGGCAGCTGAGGCTGTAAGAATTTTAATATGCTACTGCTTTCAA GGGGCTCGTAGTTTTTTTGTGTGTGGTGAAGTTTGAGTTACCATGCTTATGCCTAAACATTGTAGGAAGCTGAAGAGGAA AGGCTCAGGAAAGAATTTGAGGGCGAGGGAAATCTTTTATCGCCTAAAGAAAAGACTGAGACTTCAGACTCAAATGTCAT TACCCCTGGAACTCAATTTATGGCAGCACTGTCGGTGGCTCTTCAGTATTATGTACAATCTAGATTGAACCACAACCCTG GCTGGCAGAAAATAAAGGTGTGATTGACATCTCATTCTATTAATTCATTATACTGCTCGATCCCTTCAAGATTGGATAAT TCCTGTCTTGTGGAATAATCCTGTCTTTTCTTTTCCTTTATACATCTGATTTTCAGGATGCTTTGTCTCTATATATTTAT TTATGGGGCTGCATTGGGTGATTAATTATTTGAAGGTTATACTTACTGATTCAAATGCACCTGGTGAGGGAGAGCATAAA ATAATGGAATACATCCGGTTACAACGAAACCTTCCCGGTTTCAATCCAAATACTCGACATTGTTTGTATGGATTGGTGAG TTTTTGTCCTATTTTGAATTTTCATCTTCTTTCTTTGGGGTCTTTATCATTTCCTTGATTTTGAATGCTATTTTATTTTC TTTAAACCAGGATGCTGATTTGATTATGCTCTCCTTAGCTACACATGAGGTTCATTTTTCAATATTGAGGGAGGTTAGTT TCCAATGTGTGAATTTTCTGGATGATATTGTTAGCTCATTGATCTTAATGTATAGTCTAAAATGATTGATAACCTGGTGA ACAGGTAATCACTTTACCAGGACAACAGGATAAGTGTTTTTCTTGTGGCCAAGTTGGCCATTTCGCCGCTGATTGTCGGG GTAAGCCAGACACTAAAACTGAGGACTGGAATCGTGCTGATGATATCCCAATTCACAAGAAAAAGTATCAGGTTGGAGGA TTAGAGTCCAGCTTCGCGATCCGAATCTTCATTTTACTTTTCGTCGTATTTTTAATTTTAAACTAATTCATTGTATTACT ATTCGCAGTTTCTTAACATCTGGGTGCTGCGTGAATATTTGCAATATGAATTGGAGATTCCCAACCCTCCTTTTGAAATC GACTTTGAACGAGTAGTGGATGATTTTGTATTTCTTTGCTTCTTTGTTGGCAATGACTTTCTTCCACATATGCCAACCCT AGAGATCAGGGAGGTATGCATCTTCCGACACCTGTGTTATACTAACCTAACAGAAACTGTGACATTGTCATCTGCTTCTT GCTATCTCATTGCTTTGGCTGTGGGATCTTAACATGCTTTGGTTGTGCCCCTTTTATTTGTCTTTATACTTAATGGTCAG TGCTGTTCTATTTAATAGACGTTATACTATTTCAGGGAGCTATAAATTTATTGATGCATATATATAGAAAGGAATTTACT GCTGTGGGGGGCTATCTTACTCATGCGGGTGAGGTAAATTTCTCGTTTTGCAGTCCTACTAAGTTGTGTTCATCTTTCGC CAGCAATTATCTCTTCACTTCTTCTGTTGCTTGTTTGTGCTTAGGATAATGCTAATCATCAATTTGAAAATCTTTTTTTT ATAATGAGTGTTGCAATGTGAACATCGTTATGCCTCCTAGGTTTGCTTGGATAGATTGGAACATTTTATCCAGTCCGTTG CTGTTCACGAAGATCAAATCTTTCAGAAACGAGTTCGAGTTCAGCAGGTATTGTGCTTTTTAATTAACTTCATGAACTGA TATGCATTAGCCGTGTTCCTTAAATATGCTTTTATAAGCTGTTTCTTGACATTTAATTCTTGCGATTGCATTTACAGGTT ATGGAAAATAATCAAGAGATGAGAGCTAGGGCAAGAGGAGTAATGCCTGAAGAGCCACGAGCCTCACTTGTGGATAAGGT TCAGTGTTAAGATTTATTGCCAGAATAATTTCTGCATTTTTCTTTGTTAAATTTAGCTTTTATATTGTTGACTTACTACT GTACGTCTTGGAACTCCACCAGAATTGTTTTTCTGGATTGTCTAAGTAATTTTATTGGTTTTCCCAAACATGCACCAAGG GTAGCTTGTCTCTGACAGCAATTCTAGGCCAATGTTGGACTACATCAAATCAAATCTAATGACATGACCAAACTAGAAAT CCTGACACAATTTTCATAATGAGCTGAATATTTCTTATTTTTTCAGGTTAAGTTAGGGGATCCTGGATACAAGGACAGGT ATTATGTTGAAAAGTTTGGTGTGTCAAGTCAGAAGGAGATTGATAAAATTAAGAAGGATATAGTAAGTTTATCAATTTAT CGGGCTTAAGTCTCATAAACTTTGTTGAGGTTTTTGTTGTTCTTGGATAACATTATCTACAGATTCTATACTAATTTAAA TCTGCCCTATGGATCGCCATGCGCGGTAAACTTTTTCCTCTGAAATGGCATTTCTGTAATATCGGTACAAATTGATCAAT TTTGATTGGTGGATCGAGTTGCTTTTTTTTAGTATGTTTCCATGCAATGAACAGGCCTGCTACTCTCTGGTGTGCTTATA TATTGTTACAGATATAATATAAAAAACATTCATATATTTTCACCTAGCAGTTTAAGCATTTGTAGTAGTTGGTTCATGAC ATGGTATTGAAGTCTTTATCACCAAGTGGCCTAGAGTTTGATCTTTGTCGCTCCCATTTTTCAATAAAAAGGTTAATTTA GCATTAAATAGGTGGGGCTGTGCATTGTCCACACTAAAAGTTTAAAACACCATTGTTTTAGGTTGTGTGTTAGACATTGA TAGGACTTGTACCAAGCCAGGAAGATGAGAGAATAGAACGAATATGTGTTTTACTGCAGAAAACCCTAATTCCCAACTGG CTCAATGTAGACAGATTTAGGCATAGAGCCAATGATACAATGGTGTTTCTGAGAAACTTTGAGAGGCTCATCCCTCTCCT CATGCATCTCATTTCACTCCCTTCACCCTCTATATATCTTCCTTACTAACTAGCTATTTGCACTAAAGTCAGTCAGTTAG TTTCACATTGATGTTGAGTTGTTGACAGTTAGGGGTGTGGTCGCCTACTTCCCTCCTATTCCTCTTTCATAGATTTTTGT AATTGGAGGCCTAATCCATGGGTTAAGACTATCCGTATCGATACCTCAAGGTGGAGAGTAGGAAATGCTTCAAGTTGGGT AGACAGTCATTCCCAGATGTCCTCAAATTCAGAGAGATTCTTCCACTTCGCTAACACTTTATTTTCTCCAAAATTAGTTC TTTTATTGCTAGCAGATCTTCCTGTTGAACTTGCAATTCACACTCTGCAGAAAACATGGGATGGAGAGTTTGGTCCTGCT TGTGGGCTGCTATTGTGTTAGGACCCAATTGCAAGGTATGGGACTCGAGTCCCACATTGGAAGTATGAGATTCTAATGTG GGGTTTATAAGGCCTTGGGCTCTCCAACTATTACAGCTAGCTTTTGTGGTGTGGTTCTCCCAAGGTTCTTATCAATTGGT ATCAGAGCCTTCCACCATGTCTCTCAGCTGCAAACGAGCGGCGCGGGTGGTGACGTCGGCATTGCAGTGTTCGCCCGGGA CTAGTCAAGGGACTAGTGCACAGCCAGCCCGCGTGGGCGCCGGGGCTGCGGAGCGTGGTGGGATGTTAGGACCCAATTGC AAGGTATGGGACTTGAGTCCCACATTGGAAGTATGGGATTCTAATGTGGGGTTTATAAGGCCTTGGGCTCTCCAACTACA ACAGCTAGCTTTTGTGGTGTGGTTCTCCCAAGGTTCTTATCATATTGCTTTCTTCAGCAGATAAATGTGAAAAACCGGCT GAGTGCTGCTGCCACTGAGAAGCTCCAACTAATAATCTACCTGACCAATCCGTTCTAGCACCTTAAATAGACCCCAATTC CTCTCTGAACTTGTGACTTAAACTCCTAAGGCTGCTTTAGGTTAACCATATCACCAACTTGAAACACCAGTGGTCTTCTA TGCTTGTTAGCATGAATCTGCATGTGATCCTGAGCCTTTAACAAATCGGTCCTCAACTCATGTTGCAATTCATCCAGCTG CTGGGCGAACATGATCACTTCCTCCACCTTGGAGGGGATAGTTGTGCCTTTCATCAAAAGGGGAGGATCTTGGCCATATT GTGCTTTGAATAGTCATTTTGGAAACTTGTTAGGCACTTTGGTCTTGTTTAATGCCCTATACTCCTATAGTACAGGACTG GTACCAAGGAACATGAGAGAATAGAACGAATCTGTGTTTGCTGAAAACCTAATTCCCTGCCTGCCCAATGTAGACAGCAT CAGGAATAGAGCCAATGATACAATGGTGTTGCTCAGAAACTTCTCGAGGCTCTGCCCTCTCCTCAAATCCCAATTTTACA ATCTAGATACCTCCCAATTCATGCCCTTCGCCCTCCATATATCCTCCTAACTAGCTAGCTACCTTTAACTAATTGTTTGC ACTAAAGTCGGTCTGTCTTAACTGGTGTAAATCAAACTCAACTTGACACCAAAGAACAATTTTTCACAGGACAAATATTT CACAAAATCCAATGTTGGATAGAAAGTATGCATCATGCATATTCTTAATATTGATAGATGGATTAGTTGATTTTAAATAT TTTGCTTTCTTACGACACTTATCCTGCTTATCCCTTTTCTGGCTATTGACAAAATATGTATTACATTAGAATACAGCTCA TTGTTCTCATTTACCTTGTAGGTCTTGAAATATGTGGAAGGCCTTTGTTGGGTTTGCCAGTATTATTATAATGGTGTAAG CTCATGGAAATGGTTAGTGGCTTTTTTGTGTGTTAATGATTGACATGGTACATTTGTATATTTACATGCATGATATACTG TTAGTAACAACTATCAGATTTTGGTAAATAGCACCACAGACTCCTTTTAGACTCGTGCTCAGAAATCATGAAGTTATCCC ACTGCTGGTCTCAGACGATCAAATTTGACCTGTTGTAGGGTTAAAAGCTGTTTGTTAGGATGTTTAATTGTGCATATGGT TATTCTGTTGCTTAATAATATCCTAGGATAATGGATGCGATGTATTAAGGTGATCTGAACATTATAATGTTTCACTTGAA GTTGTAGAGGATCACAAGATGGTGGAATTATTCTTTTTTCATAATTATGTTAAATTAAATGGTCACTCAATCAATGTCTT GACCTCCAGGCTTCTAAGTTTCATTAAACCCTGTTACAGTCCCAAAGATAGTTAGGTGCTTCTAGTTGTTATTTTAGAAA CAATTTAATATAACATAATATAGACTGGATGCCCTGATGGCTGGGATGTCAGATATAATATCATCGAAGTTGCATGTCGA CAACGGATGTGAATTGCTAGGAGGTCTCTTTCGTTTTAGTCGAATTATTACCCTTGACCATTGTTCAATGTGCTCACGAT TGATATCGTTTCTTCAGGTACTACCCATATCATTATGCTCCCTTTGCTTCTGATCTTAAAGATCTACCTGATCTAGAAAT ACATTTCTTTCGGGGAGAGCCATTTAAACCATTTGATCAGCTCATGGGGGTCCTACCTGCTTTAAGGTTTCTTCCCTTTC CTGTCCTTGGATGTGCTTTACCGTGCTTTCTGTCCTGATACTTACTATTTTTTTGTTACAGTTCAAATGCACTGCCTAAA AAATATAGGGATTTGATGACTGATTCTTCACCAATTTTACACTTCTACCCTGCTGGTGAGATCGCTTGTTTATTGACTAA TTATTCTGCAATGTTTTTACATATTTTCTTATTCTGGTATTATATGGGATACCTTTTTGACAGATTTCGAGATTGATATG AATGGAAAACGATTTGCATGGCAGGTATTACACTTATACAGTATACACATTAGAACTGCCTTAGAATTAAGTGGGAGTTA AGGTTGATTTTTAAAATTTCTGTTGGGGAATCTTTTCAGGGTGTTGCCAAATTGCCGTTCATTGATGAGAAGAAATTGCT TGCTGCCACAAGGAAGATTGAAGACACATTAACGGTCTGGAAATTAAGTTTTTTCTTGTTTTTGTTTTTGTTTGGTTTGT GTGTGTGTGGCAGTAGAGAGGGGTTTTTACGATAGTCATGACTAATAATACTTGATTCGTGATCTAAAATTGTTGGCCTT CAAATTCACCAAAAAATAAACTGTAAGATTAAGCCTGCCTTTTTCTTCTGGAACTCTAGGAAATTTTCAACATTTAGGAT AATGCAGAACTTATTATGCAAACACTAATTGTTTATCTCCGGAGATTATTAATTTATTTTACAAGCACTCTTGAAATAAG AGAAGAGTTGGATTAAGGTGTGCTCTGCAGCATGGCAACCCGAAATCCAGCTGTGCAACTCTTGAAATAGGAATTGCTGA ATGTTGATCGTCTGTCGCCATTTTTTGAATTGATATATTTTGAAGTGTTAATAATCCTCTGTTGTATGTTTGCTAACCAA TTAGTGGAAGATTTTTGCTTCAGATAATTTTTACAATTTTTCAAATGGGTTGATTTTGAGATGCATTTAAGAGTTCTTCA TGTTTTACAGAAAAAGAATTCATTAAAGCAGCTAATCATTATTTGTGTCTTTAGTGCTTAATTTATGTTTTGTTATGTGC AGGAGGAAGAACAGCTTCGGAATAGTGTGATGCTTGATTTGCTTTATGTCAACCGGGCGCATGATTTGGCTCCTCATATT TTATTGTACTGCAAAGCTTATAGTCAGTCACCCTCACATGAAAGATGTGTTTCTCCAATTGCCACAAATGCTAGGTTGGT AAATATGCTAACCGTCGTCACTCATAGTTCATGAATTTTGGTAGCTGTTTTGGAGGCTCATATACTTGTTTTGTTATCTT TGTTAGCAGTGGTGGGATGAATGGATATCTTTGGTTATGTGAGAGAAATGTTTTCAGCAGTATTGTATCTTCTCCCATCA ATGGATTGCAAGATCTCGAGTCTAATCAAGTCTTGTAAGTTTGGTCCTCTGCAGTCTACACCTACCTAATATTTTGAAAT CTTTGGTGGAGAACTCATGTTGAGTGTTCTTGAATTTCAGAAATATTACATATCTTCATCCTAGTAGACATAGACATATC CCTGAACTTCCAGATGGTGTAGTAATACCCGAAAAGGTTTGTATACACTGACTGCTCTTCGCATCTTACTTAAGGTTGAT TGCTTCATCTAGTGGATGGAGCTCCATGACTATTAGATTATTCATGTACATAATTAACCAGATCCTTTTGGCTATAACTA TGCTCAGATAGTTGTCATGGAAGGAATAATCTGTTCTGCTCTATTATTTCGTCCTACTGTTTTTTTTTCTTAAAAGGAAA GTAGATGTTGATACCTTTTGTTTCCTTATTTTATCAATTTTACAAACCACTTACTTTGCCAGTGTTTTTATTGCAGATAA TAAAAGCCATTGATATCAAACCTGTTCCTGTGCTATGGCATGAAGACAATGTTGGTCGGCAACAGCAAAGCAGACAAAGG TGAGAATCTATTCCTACGCGGATGTCAGGTTGCTGCAGTATAATTTTCATGTTCTTGTTGGCTGGGATTCAAACATACAA GATTACAATTTACAACTATGCTAAAACTGATGGTTAAGTTTACTGTTCGATATGATAAGGGCACACCATTATTTCCTTGC CATACTGTGATGAAATTGTGGGAATTGATCATCAGTATTTTCTTCAAGCTATACATTTGTGGAAAATCCTGAAAAATCAA TCTCTGAGGAGGTTGAAAAGTTCTCATGGCTATCAATTTAAGCATGTGAGTTTCTTGAAGCAAGAATCTTACCCTTTTCT GTGTGATGCTTCTGACAGGCTGCAAGTACCTGGAGCAATTGCTGGACCTCAACTAGGAGATGCAGCTCATCGTCTTGTCA AAAACACCCTTAACATCAAATTGAATAATACTTCACGTGGATTTTTGGAGCAACCTCCAGCCCACCATACAACGAACAGA TTCCGGGCAGCTGGACCCTCTAGATATGAAAGATATGATGGCGAGAACACAAATGGTTATTATGGACAACCTAATCACCA TGGTGTTATGGCTAGACCTAGATATCCATTCACATCTAATGGTGGACAGAACGACAGACACAATTTTAGGACACAATTTA GGTCACAGCATCAAGAACAGTCTTACAATGTGAAGGCTGGGTTTTCTGCTTTAACAATGGAAGAAGGAGTGAGACCTAGG TCATCGAGGCTTCCAAATTCTGGACCAATCAATTTAGAACCCCGATTTGTGCAGAACATGGGTCGTCCAGTACCACCTCC AAAGTGGATTACTAAAGCACCGCCTGCGAATGAAATGTACAGTAGGCATCAAGAAGCTGCATCGGGGGCAGTACCTTATG ATAAGCAGACAAAGGCTTACCAAGTTAAAAAACAGGAGCCCCAAGATACTCCTGATTGTGGGAATTGATAGTGGTCGCCG TGGATCTTATTTGCCTTGTGTTTGACATGTCTTTGTTGCTCATCGCCCGTTCCTCAAACTGAAACTATGAACTCTATGGG CACTCTGGTTCAATATTGGATTATAGGGGTTCCTCAAACTGAAGCTATGAACTCTTTATGGTCACCCTGGTTCAATATTG GATTATAGGGGCACTTATCGATATCCCAATGCAATTGAGGGAGCAGTGATGTTCAAAGTTTTCTATGACACTTATGTGTA GTGAAGGTGCTGCTCTGATTCGCCTTGAAGAGACGTTGTATGTACCTCACTGATAGTTGTCCAGGCTTTGGAAAGATGCA AGAACCTTGCATAAAAGAAATTCTCGATTTTTCTTGCATTAGCATGGAGCTGGTATAGGCCGATGGAGAACATCAACTTG CTTGTTGTTAATCAGAATCGTGCAAGAGTTATTCTGTTCCATGGCATGGAACTAAGTTGTTGTGTTCTGCATGTGGATCC CGTTGGGCTTAGTAGTAGCTCTGTTTAACAACAGTTTACTTGTACATATCTGATGTAATAAAACTCGATTTGCTTAATGG AGAATGTAGCATTTGTATTTTACATAGGACATAAAAAAATGGAAACGAGGAGGTTGTTGTGTTTGATATTCAGTTCTAAC TGCATTGGGTATTTCGGATGGGATTGAAATGGTCAATAAGTTTAGTTTTTTGATAGAATTTATTATGAAAGGATTGTGTT GAATGAACTAATGTTAAAAAGATGATTGTCTAAAAATTATATTTTAAGGATAACAGTAATAATCAAAGTCTCGTCTTACT TTTTTCTCTTACGAAATGGAATGAGTTTCATAGACGAGATGACATTCTGTCAAAATTTGATTAGAATGGTAGAATAAAAA TATTGTTGAAAATATGAATATAAG
CDS sequence (LotjaGi5g1v0214900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAGTGCCAGCGTTTTACCGGTGGCTCGCCGACCGCTACCCGCTCTCGATCTCCGATGTACTGGAGGACGAACCCGC CGTCGTCGGCGACGGCGTTCACCTCCCAATCGACCTGACAAAACCCAACCCCAACGGCATGGAGTTCGACAACCTGTACC TGGACATGAACGGCATCGTTCACCCTTGTTTTCACCCTGATGGCAAGCCAGCACCTGCTACCTATGATGATGTGTTCAAA TCCATATTTGACTATGTTGACCATCTCTTCTCGTTGGTTCGTCCAAGGAAGCTTCTCTACCTTGCAATTGATGGTGTTGC GCCGAGGGCCAAAATGAATCAGCAACGTTCTCGGCGTTTCCGTGCTGCCAAGGAGGCAGCTGAGGCTGAAGCTGAAGAGG AAAGGCTCAGGAAAGAATTTGAGGGCGAGGGAAATCTTTTATCGCCTAAAGAAAAGACTGAGACTTCAGACTCAAATGTC ATTACCCCTGGAACTCAATTTATGGCAGCACTGTCGGTGGCTCTTCAGTATTATGTACAATCTAGATTGAACCACAACCC TGGCTGGCAGAAAATAAAGGTTATACTTACTGATTCAAATGCACCTGGTGAGGGAGAGCATAAAATAATGGAATACATCC GGTTACAACGAAACCTTCCCGGTTTCAATCCAAATACTCGACATTGTTTGTATGGATTGGATGCTGATTTGATTATGCTC TCCTTAGCTACACATGAGGTTCATTTTTCAATATTGAGGGAGGTAATCACTTTACCAGGACAACAGGATAAGTGTTTTTC TTGTGGCCAAGTTGGCCATTTCGCCGCTGATTGTCGGGGTAAGCCAGACACTAAAACTGAGGACTGGAATCGTGCTGATG ATATCCCAATTCACAAGAAAAAGTATCAGTTTCTTAACATCTGGGTGCTGCGTGAATATTTGCAATATGAATTGGAGATT CCCAACCCTCCTTTTGAAATCGACTTTGAACGAGTAGTGGATGATTTTGTATTTCTTTGCTTCTTTGTTGGCAATGACTT TCTTCCACATATGCCAACCCTAGAGATCAGGGAGGGAGCTATAAATTTATTGATGCATATATATAGAAAGGAATTTACTG CTGTGGGGGGCTATCTTACTCATGCGGGTGAGGTTTGCTTGGATAGATTGGAACATTTTATCCAGTCCGTTGCTGTTCAC GAAGATCAAATCTTTCAGAAACGAGTTCGAGTTCAGCAGGTTATGGAAAATAATCAAGAGATGAGAGCTAGGGCAAGAGG AGTAATGCCTGAAGAGCCACGAGCCTCACTTGTGGATAAGGTTAAGTTAGGGGATCCTGGATACAAGGACAGGTATTATG TTGAAAAGTTTGGTGTGTCAAGTCAGAAGGAGATTGATAAAATTAAGAAGGATATAGTCTTGAAATATGTGGAAGGCCTT TGTTGGGTTTGCCAGTATTATTATAATGGTGTAAGCTCATGGAAATGGTACTACCCATATCATTATGCTCCCTTTGCTTC TGATCTTAAAGATCTACCTGATCTAGAAATACATTTCTTTCGGGGAGAGCCATTTAAACCATTTGATCAGCTCATGGGGG TCCTACCTGCTTTAAGTTCAAATGCACTGCCTAAAAAATATAGGGATTTGATGACTGATTCTTCACCAATTTTACACTTC TACCCTGCTGATTTCGAGATTGATATGAATGGAAAACGATTTGCATGGCAGGGTGTTGCCAAATTGCCGTTCATTGATGA GAAGAAATTGCTTGCTGCCACAAGGAAGATTGAAGACACATTAACGGAGGAAGAACAGCTTCGGAATAGTGTGATGCTTG ATTTGCTTTATGTCAACCGGGCGCATGATTTGGCTCCTCATATTTTATTGTACTGCAAAGCTTATAGTCAGTCACCCTCA CATGAAAGATGTGTTTCTCCAATTGCCACAAATGCTAGTGGTGGGATGAATGGATATCTTTGGTTATGTGAGAGAAATGT TTTCAGCAGTATTGTATCTTCTCCCATCAATGGATTGCAAGATCTCGAGTCTAATCAAGTCTTAAATATTACATATCTTC ATCCTAGTAGACATAGACATATCCCTGAACTTCCAGATGGTGTAGTAATACCCGAAAAGATAATAAAAGCCATTGATATC AAACCTGTTCCTGTGCTATGGCATGAAGACAATGTTGGTCGGCAACAGCAAAGCAGACAAAGGCTGCAAGTACCTGGAGC AATTGCTGGACCTCAACTAGGAGATGCAGCTCATCGTCTTGTCAAAAACACCCTTAACATCAAATTGAATAATACTTCAC GTGGATTTTTGGAGCAACCTCCAGCCCACCATACAACGAACAGATTCCGGGCAGCTGGACCCTCTAGATATGAAAGATAT GATGGCGAGAACACAAATGGTTATTATGGACAACCTAATCACCATGGTGTTATGGCTAGACCTAGATATCCATTCACATC TAATGGTGGACAGAACGACAGACACAATTTTAGGACACAATTTAGGTCACAGCATCAAGAACAGTCTTACAATGTGAAGG CTGGGTTTTCTGCTTTAACAATGGAAGAAGGAGTGAGACCTAGGTCATCGAGGCTTCCAAATTCTGGACCAATCAATTTA GAACCCCGATTTGTGCAGAACATGGGTCGTCCAGTACCACCTCCAAAGTGGATTACTAAAGCACCGCCTGCGAATGAAAT GTACAGTAGGCATCAAGAAGCTGCATCGGGGGCAGTACCTTATGATAAGCAGACAAAGGCTTACCAAGTTAAAAAACAGG AGCCCCAAGATACTCCTGATTGTGGGAATTGA
Protein sequence (LotjaGi5g1v0214900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGVPAFYRWLADRYPLSISDVLEDEPAVVGDGVHLPIDLTKPNPNGMEFDNLYLDMNGIVHPCFHPDGKPAPATYDDVFK SIFDYVDHLFSLVRPRKLLYLAIDGVAPRAKMNQQRSRRFRAAKEAAEAEAEEERLRKEFEGEGNLLSPKEKTETSDSNV ITPGTQFMAALSVALQYYVQSRLNHNPGWQKIKVILTDSNAPGEGEHKIMEYIRLQRNLPGFNPNTRHCLYGLDADLIML SLATHEVHFSILREVITLPGQQDKCFSCGQVGHFAADCRGKPDTKTEDWNRADDIPIHKKKYQFLNIWVLREYLQYELEI PNPPFEIDFERVVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHIYRKEFTAVGGYLTHAGEVCLDRLEHFIQSVAVH EDQIFQKRVRVQQVMENNQEMRARARGVMPEEPRASLVDKVKLGDPGYKDRYYVEKFGVSSQKEIDKIKKDIVLKYVEGL CWVCQYYYNGVSSWKWYYPYHYAPFASDLKDLPDLEIHFFRGEPFKPFDQLMGVLPALSSNALPKKYRDLMTDSSPILHF YPADFEIDMNGKRFAWQGVAKLPFIDEKKLLAATRKIEDTLTEEEQLRNSVMLDLLYVNRAHDLAPHILLYCKAYSQSPS HERCVSPIATNASGGMNGYLWLCERNVFSSIVSSPINGLQDLESNQVLNITYLHPSRHRHIPELPDGVVIPEKIIKAIDI KPVPVLWHEDNVGRQQQSRQRLQVPGAIAGPQLGDAAHRLVKNTLNIKLNNTSRGFLEQPPAHHTTNRFRAAGPSRYERY DGENTNGYYGQPNHHGVMARPRYPFTSNGGQNDRHNFRTQFRSQHQEQSYNVKAGFSALTMEEGVRPRSSRLPNSGPINL EPRFVQNMGRPVPPPKWITKAPPANEMYSRHQEAASGAVPYDKQTKAYQVKKQEPQDTPDCGN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 1 | 254 | 254 | 7.4E-97 | ||
| PIRSF | 1 | 436 | 436 | 4.9E-241 | ||
| PANTHER | 1 | 939 | 939 | 0.0 | – | |
| Gene3D | 1 | 146 | 146 | 5.6E-40 | – | |
| PANTHER | 1 | 939 | 939 | 0.0 | ||
| CDD | 52 | 314 | 263 | 4.92334E-138 | – | |
| Coils | 112 | 143 | 32 | - | – | |
| MobiDBLite | 134 | 159 | 26 | - | – | |
| MobiDBLite | 134 | 150 | 17 | - | – | |
| Gene3D | 155 | 351 | 197 | 4.7E-50 | – | |
| SUPERFAMILY | 260 | 285 | 26 | 9.24E-7 | ||
| SMART | 264 | 280 | 17 | 1.6E-4 | ||
| Pfam | 264 | 278 | 15 | 9.2E-6 | ||
| ProSiteProfiles | 264 | 279 | 16 | 10.18 | ||
| Pfam | 327 | 425 | 99 | 1.4E-40 | ||
| PIRSF | 421 | 879 | 459 | 1.1E-122 | ||
| Pfam | 436 | 720 | 285 | 4.6E-115 | ||
| Gene3D | 517 | 611 | 95 | 1.4E-30 | – | |
| MobiDBLite | 863 | 943 | 81 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Molecular function | Exonuclease activity | Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end. | ||
| Molecular function | 5'-3' exoribonuclease activity | Catalysis of the sequential cleavage of mononucleotides from a free 5' terminus of an RNA molecule. | ||
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. | ||
| Biological process | Nucleobase-containing compound metabolic process | Any cellular metabolic process involving nucleobases, nucleosides, nucleotides and nucleic acids. | ||
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. |
Expression pattern of LotjaGi5g1v0214900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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