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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0104600 |
| Transcript ID | LotjaGi2g1v0104600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cytochrome b-c1 complex subunit Rieske, mitochondrial; TAIR: AT5G13440.1 Ubiquinol-cytochrome C reductase iron-sulfur subunit; Swiss-Prot: sp|P51132|UCRI2_TOBAC Cytochrome b-c1 complex subunit Rieske-2, mitochondrial; TrEMBL-Plants: tr|A0A0L9T7J6|A0A0L9T7J6_PHAAN Cytochrome b-c1 complex subunit Rieske, mitochondrial; Found in the gene: LotjaGi2g1v0104600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:35048191..35053128) extracted from Lotus japonicus Gifu genome v1.2.
GGAGATTTTTTTTTTTGTCAATGATAAATAAGATGAGACTAGGTTGACCGAGTTATCTGGGTCCATTTTCTAACAAAATG ATGGCCCAGCTTGACGGGCCGGATTGCCCCTGTTTTACTAGTTTTGGGAGGAGCCACGTTGAGAGATATACATATTCCAC TCCCTCTTCTCTCTTCAAAGTTTCCACCATATTCTCCCTATTTCTCCTCTCGAAAAGCTGCATCACAACAACAAAACACA CCATTCATTCATATTTTCAGCTCCATTTTTCTGCCAAATAAAAAGAAAGAGAAGGGGGACAAAAAGGGCAAAACAAGATG TTGAGGGTTGCTGCTAGGAGGCTTTCTTCTCTCTCCTCGTCTCCGTGGAGTCCCAGCCACGCCGCCGCCTCCGCCTGCCT CTCTCGTAACTCCGTCGTCGATAGCCACAGATCCGACCCAGGCTCTCATTTCCTTCTTCCCTTCAGAGGTTGGTATTTTA CCTTTTTGCCCCTTCCTATCAGTATATGCTCATAGAAGCTGATCATCACTATGTCATGCTTTGGAATCATTGTAAGTTGA TTCGTTTGTTGCTGATTTCTAGGATTGGGAATTCATGTTCTTTCTCTTTAAATGAAACTTGGTTTTGTGTGTCTTGTGCC ATCTTCCTTATGGAACTGCTTATTGGAAAAGAGTTATAGTATAGTTAATGGTAAACTATTTTGTAGTGGAATGTAAGGTG TGCGGCGCGCTGTAGCTGTAGTATCGGTGCCCGTTCTGATGATGTGAAACTCGTTTGATTTTGTTTGTGAAAACAGACAG GAATTTGTTGTAAACTGATTATTAGTTAGGTGCGAGTGAAAGTGGTAGGTCTTTATAGTTAATGATTTCCACCTCTCTTT TTTACTGATAATGTAAGTTACTTAAGGGTTTTTAGAGTGTGTTTGGATGTTGGGGGGGGGGGGGGGGAAGGGAAGGAAAT GAAGAGAAGACAATGAAAGAAAATGCAGATTTGAGTGGCGATTTTCTTTCTGTTTGTTCAGATGTTTATAATCCTCCAGA AAAATTACCTACTCAGTCTGTTAGTTAAAGTTTATAAAGGATGGTTTTGGAAGATCAGAAAAAGGGAATAGTTATTATTG ATCAGAACTGTAATTCAGGTTCCCTGTAGTACAAATGTCCTGCACGATGCTAAGACAATAGGTTCGACAATCGCTTAACC TTAGGAGGGTACTCCTATTTATAATAAACTAATCCTAATAAGATAACATAACCTCTAGGAAATAATAAAGATATCCTAAC CAAAATAAAAGATAACATCCTAAAATACAATATTAGTTCCTAAAACAAAAGATTGAATCCTAAATTAAAATAAATTAAAT GCTTAATATTTAGATCCTAAGAGATATGAACAAATTGTATGGAGAAATCTCTCCCTTGCCCAATTACTTAGAGTCAACCG CCCAATTACCACAATACCACCCCAAAAATCCAATGACTGATCTCTATCCTTATTATTTATGTCCTTCCTTTTCTCCTCTA ATTTGCTAAATTAACTTATTTTCCTACTAACTAATAGATTGGGCCCTCTTTAACTGAGGTATGATAAGATTTACGGATTT ATCTTAAGGGTTTTTAGAGTGTGTTTGGATGTTGGGGGGGGGGGGGGGAAGGGAAGGAAATGAAGAGAAGACAATGAAAG AAAATGCAGATTTGAGTGGCGATTTTCTTTCTGTTTGTTCAGATGTTTATAATCCTCCAGAAAAATTACCTACTCAGTCT GTTAGTTAAAGTTTATAAAGGATGGTTTTGGAAGATCAGAAAAAGGGAATTGTTATTATTGATCAGAACTGTAATTCAGG TTCCCTGTAGTACAAATGTCCTGCACGATGCTAAGACAATAGGTTCGACAATCGCTTAACCTTAGGAGGGTACTCCTATT TATAATAAACTAATCCTAATAAGATAACATAACCTCTAGGAAATAATAAAGATATCCTAACCAAAATAAAAGATAACATC CTAAAATACAATATTAGTTCCTAAAACAAAAGATTGAATCCTAAATTAAAATAAATTAAATCCTTAATATTTAGATCCTA AGAGATATGAACAAATTGTATGGAGAAATCTCTCCCTTGCCCAATTACTTAGAGTCAACCGCCCAATTACCACAATACCA CCCCAAAAATCCAATGACTGATCTCTATCCTTATTATTTATGTCCTTCCTTTTCTCCTCTAATTTGCTAAATTAACTTAT TTTCCTACTAACTAATAGATTGGGCCCTCTTTAACTGAGGTATGATAAGATTTACGGATTTATCTATAGAACCAGTTCTC CCCTTTCTTTTTCTTCCCTTTTAAGTCTTCAAAATTGCTATAACTAAAATGAAATCAAGATGTGTAATCTTTTGAAATAC TGTCATTTAGGGAGTTGCTTTTTCTTTTTCCTTTTGTTGGTTTAATTTAAATTTCTGTAAATAGTTAAGATTTGTTTTGC TTAAAAGGAAATAAAGAGATAAAAAGGTTGCAGTGATTTGAATAAGCTATGAATCCAGAGTTCATAGTTTTGCTCATAGT TATTAGTATCTTATGATATGTATCTTGATACGATACAAATTCTTGAGGCAGCGATACGTAGAGTGTACTGTGAATCTAAA ATGAAACTGAATATCATTCTGTATCTCCAAGTCGAAGCCAAATCTTACAATTCGCCGTTGAATCTTACAATTCAAATTTG TGTGCATGTTTCACTTCAGTCGAGTCTGGTTGCATGATCTGTATCAGTTTTGGTGCTTTTTGGGCTGACTTTTTAAAGTT TTTAACAAAATAGGCCACAAAATCCTACTAATATTCCTCCAAAAGGCCCACATCACACTTTCATGAAAATCAAACCCTAA TTTGGTCCTCACTACCATCGATTCATTTGACATTTCAGGCTTACCAAAGAAATGCGTCTCCTTTGTTTTATCGGTTCTTG TCCCCTTGTACTTCTCAACACCATCTATTAACGCCTTTCCTGCTGTTATATTTGTTTACTGTAGTTGTGCATTTTTTGTT ATTGCTACATTCTAGTGTTGACCTTGAGGATGATGAGTGACTCAATTCGTTAGGTTATGATTATTTACTAGGATCCAAGT ATAGGAAGTAGGAAAGTAATTTGGATTTTGTTATCTTATTGATGTTTTTTTTAAGGGGTTGAATACTTGAACTTTGTGCA AGCATTCACTATTTTTCTTCTAACTTGATTTGATGCTTGAATCCAAGATTATTTTGAGGTTTATTATATATTATATCATC TTATGTTTCAATTTATTACTTGATTTTTCTGTATCATGTATCTTACAATACATAAAAAGATTTGATTCATGACTTCTGAT TCAAGATTCGAATCTCAATTCAATAACCAGTTCTTCTTTCTTTTATTCTTTTTCATATTGAATTTATTTGAATGTAGGCT GAAACTGAACACATCTATTTAGGTTTCTGTGTTTGCTACTGTTGTAAGGTGCTTTTCTTCACTGTTGGTGAATCAATCAT ATTTGCAAATTATTTTATTCTAGCGGTTTAGTTTGTAGTTTTTGATTGTGCCTATTCTTTTGGTTATTCAAAAAGGTTAA AGCATTTTCTTCAGTAATTTATATTGTTTTATTTGATTATTATTCATCGAACTAAAGGAAACTCTAGTGATTGATGTAAC TTTATTTCGTCCAGGTTTTGCTAATGAATCAGTGATCGATACAAGAGAAAACAGCATATTTCCTGAGATTCCCGCAACCA TTGCTGCTGTCAAGAACCCTAGTGCTAAGATTCTTTATGATGAGCACAACCATGAACGATTTCCCCCAGGTGACCCAAAC AAGAAGGCATTCGCCTACTTTGTCCTTACAGGTGGCAGGTTTGTTTATGCCTCTCTGGTCCGTCTCCTTGTACTCAAGTT TGTGCTTAGCATGTCTGCTAGTAAGGATGTTCTTGCTCTTGCTTCGCTTGAGGTCGATCTCTCCAGCATTGAGCCCGGCA CTACAGTGACTGTTAAGTGGCGTGGAAAGCCGGTATTCATCAGGCGGCGAACAGAGGATGATATTAACCTGGCAAATAGT GTTGATGTTGGATCCCTTCGTGATCCACAACAGGATTCCGATAGAGTCAAGAACCCAGAATGGCTCGTTGTGATTGGGGT CTGCACACATCTGGGTTGCATTCCATTGCCAAATGCTGGTGACTATGGTGGATGGTTTTGCCCATGCCACGGTTCCCATT ATGATATTTCTGGCAGAATTAGGAAAGGACCAGCACCATACAATCTGGAGGTTCCCACTTACACTTTCTTGGAGGAAAAC AAGTTGTTAATTGGTTGAAACTTGAAAATGATGGCTTTGTCCTGATTACAATTTTTTGTGATGGTTTTGCATCCTGGTGG GATGAGTTTACAGTTTCTTTTTTATTGCATAATGTTAAAATGTACCTTTTGGGCGTTTTTTTTGACCTTTCAAGTCCTTG GGTACTGTCCAGGAAGTGGTTTTTGTATGTCGGAATTTGTAACTATTACTGTTTGGCGCGACTTTTACCAATAATCGCCT TTCTTTTGCTTAGGTTTGAGCTGCTACTTGGTAGTTGGTACCCCATCTGAATGAATTTCACTGGTGTTATTGAGGGACTT ATTGCTGCTTCATATCTCTAATTATCTGTTTGCTGTTTGCTCTGTTCTTTCATGTTCTCTTTAATTTCTTACTTAGAATT GAGCTGCTTCTTTGTAGTTGGCACCCCTTGTGCTCCTATTGATACATGTCTGGGGAATATTGCATCGTGTAAAAGCTACT ATTTGGGGAATACTGCATCGTGTTAAACAATTTGAATTTGGTTTAACAAATTAGGGCCTGTTTAGTTTGAGAAAACATTT TCTGTTTTCATTTTCTGATTTCATTTTGTGAAAATGATTTTCATTTTCAAGACCTGCC
CDS sequence (LotjaGi2g1v0104600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTGAGGGTTGCTGCTAGGAGGCTTTCTTCTCTCTCCTCGTCTCCGTGGAGTCCCAGCCACGCCGCCGCCTCCGCCTG CCTCTCTCGTAACTCCGTCGTCGATAGCCACAGATCCGACCCAGGCTCTCATTTCCTTCTTCCCTTCAGAGGTTTTGCTA ATGAATCAGTGATCGATACAAGAGAAAACAGCATATTTCCTGAGATTCCCGCAACCATTGCTGCTGTCAAGAACCCTAGT GCTAAGATTCTTTATGATGAGCACAACCATGAACGATTTCCCCCAGGTGACCCAAACAAGAAGGCATTCGCCTACTTTGT CCTTACAGGTGGCAGGTTTGTTTATGCCTCTCTGGTCCGTCTCCTTGTACTCAAGTTTGTGCTTAGCATGTCTGCTAGTA AGGATGTTCTTGCTCTTGCTTCGCTTGAGGTCGATCTCTCCAGCATTGAGCCCGGCACTACAGTGACTGTTAAGTGGCGT GGAAAGCCGGTATTCATCAGGCGGCGAACAGAGGATGATATTAACCTGGCAAATAGTGTTGATGTTGGATCCCTTCGTGA TCCACAACAGGATTCCGATAGAGTCAAGAACCCAGAATGGCTCGTTGTGATTGGGGTCTGCACACATCTGGGTTGCATTC CATTGCCAAATGCTGGTGACTATGGTGGATGGTTTTGCCCATGCCACGGTTCCCATTATGATATTTCTGGCAGAATTAGG AAAGGACCAGCACCATACAATCTGGAGGTTCCCACTTACACTTTCTTGGAGGAAAACAAGTTGTTAATTGGTTGA
Protein sequence (LotjaGi2g1v0104600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLRVAARRLSSLSSSPWSPSHAAASACLSRNSVVDSHRSDPGSHFLLPFRGFANESVIDTRENSIFPEIPATIAAVKNPS AKILYDEHNHERFPPGDPNKKAFAYFVLTGGRFVYASLVRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWR GKPVFIRRRTEDDINLANSVDVGSLRDPQQDSDRVKNPEWLVVIGVCTHLGCIPLPNAGDYGGWFCPCHGSHYDISGRIR KGPAPYNLEVPTYTFLEENKLLIG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 264 | 264 | 1.9E-145 | – | |
| Phobius | 1 | 8 | 8 | - | – | |
| PANTHER | 1 | 264 | 264 | 1.9E-145 | ||
| ProSiteProfiles | 1 | 27 | 27 | 6.0 | – | |
| SignalP_GRAM_POSITIVE | 1 | 22 | 22 | - | – | |
| Phobius | 1 | 22 | 22 | - | – | |
| Phobius | 9 | 17 | 9 | - | – | |
| Phobius | 18 | 22 | 5 | - | – | |
| Phobius | 23 | 264 | 242 | - | – | |
| SUPERFAMILY | 82 | 137 | 56 | 1.85E-14 | – | |
| Pfam | 86 | 135 | 50 | 1.1E-11 | ||
| TMHMM | 102 | 124 | 23 | - | – | |
| TIGRFAM | 117 | 264 | 148 | 1.3E-55 | ||
| SUPERFAMILY | 126 | 263 | 138 | 3.54E-41 | ||
| Gene3D | 136 | 264 | 129 | 1.4E-55 | ||
| CDD | 141 | 264 | 124 | 2.15649E-87 | – | |
| Pfam | 147 | 250 | 104 | 5.0E-12 | ||
| ProSiteProfiles | 194 | 262 | 69 | 18.08 | ||
| PRINTS | 202 | 213 | 12 | 2.0E-17 | ||
| PRINTS | 224 | 236 | 13 | 2.0E-17 | ||
| PRINTS | 236 | 248 | 13 | 2.0E-17 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Ubiquinol-cytochrome-c reductase activity | Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: CoQH2 + 2 ferricytochrome c = CoQ + 2 ferrocytochrome c + 2 H+. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Molecular function | Oxidoreductase activity, acting on diphenols and related substances as donors | Catalysis of an oxidation-reduction (redox) reaction in which a diphenol or related substance acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor. | ||
| Molecular function | 2 iron, 2 sulfur cluster binding | Interacting selectively and non-covalently with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi2g1v0104600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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