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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0633700 |
| Transcript ID | LotjaGi1g1v0633700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cytochrome b-c1 complex subunit Rieske, mitochondrial; TAIR: AT5G13430.1 Ubiquinol-cytochrome C reductase iron-sulfur subunit; Swiss-Prot: sp|P49727|UCRI_MAIZE Cytochrome b-c1 complex subunit Rieske, mitochondrial; TrEMBL-Plants: tr|I3SAX8|I3SAX8_LOTJA Cytochrome b-c1 complex subunit Rieske, mitochondrial; Found in the gene: LotjaGi1g1v0633700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:118760469..118765263) extracted from Lotus japonicus Gifu genome v1.2.
CTGGTCAATCACACACGGTCAGAGACGTGTGATTCTGCCCCCTTTTGCGAGCGTGATCGTTTTTTTTTTGTTTTTGTTTA ATTTAATTTTTGTAGTAAAAGAAAAGAAATGCTTCATCATCCTCACGAAGCAAAAATCGAAGGCTGAAGAAGATGTTGAG GGTTGCAGCTAAGAGGCTTTCTTCTTCTCTCTCCTCCTCCTCTCCATGGAGGACCAACCACGCCGCCTCCGCGTTCCTCT CCCGGAACCCCCTCGCTCCACCGTCCTCCACCTCCGATGAACGCGGATCCGACCCGTTCTCTCTCCGACCCGAATTCTTT CTTCCCTTCAGAGGTTAGGGTTTCCCCCTTTTTCCCCGACCCCTATTTCATTTCTGTGATTCAATTCGGGTCTCGAAGTT CGATTCGTTTCGCTGTTGCTTTTATTTGTTCGATTGGTTTGATTTGTTGGATTTAGGGTTCATTTCTGCATGATTTGTGA CGATTTTCGCACTTGATTCGATGGTTTGCTGGTTTTGGATGTTTCTGCTTATTATGTATGATGATGATGAAAAAATTGAG AAGTTTGATGTGGTGGTGGATGATTTACAAGCGTTTGGGTTGTTGATCCCAATTTTGAATCTTCTTCGATAGATTTGGAT TTTGATGTGAAGATTTTCATTTTGTGTTCGTCTTCTTGGGGACAATTTTCATATTTTCATTTTGGAATTTGAAAATTGGA TTCCTAGGCAGAGGCGGTGCGTGATGCTTTTTTGCTTAATTTCGGTGTTTCGATATGCCTAAGTAGTTTTTCTTCTTTTG ATTTTTCTGGGTGTTATTTGGATTTAAGCTGGCTATGTTCTTGTCTCACCTCATTTGGCCTGTTTGGAAAAAATGAAGCC AGCTATTTGTTGCTAAGAATTTAATGGTCAAAATGTTGTCCGTCTAATCCCATTCTAATGGAGTTGTAATTCATTGTGCT TTCATTTTGAAAGTTTAGTTGTTGTTGAACGTTGATTGTTTATCAATTCTGGAAGGGCATCTCTGATACGAGACAGGCTG AATTATGGTAAAAACAATGGATTTTGCGTTTAGGAAATGTGTAGAAGACCCCAAGTGGTGGAACTCTCTTTTTATGTTTG TATGGATACTAACTAGCATGTTAAAGAAGTTGCTGCCTAACCACCTGATATCATTTTCAGTGCCATCGTTAAAACTTCAT TCGGTGAAATCATAAAGTAGACCAATAACTGTTTTTTGCTTTTGATGTTGGCTGCAATGAAGTGGTTTTAAAATGATGAA GACAATTATGGTATATTACTTACTAAGCTGTTTAGTTGGATAGGTGATGAACACGTTTTGAAGGTCTTGAATAGTCATTG TGATTGTTCTGTGTATGCCTAATGATATATTATTGTTCCACCGTTATGAATTACCTTTCTGCTGTATCATTAAATCAACA ATTCATAACATAGAATTATTGATCACATAGACCAGTAGCTGTTTTTTGCTTTTGATGTTGGCTTTAAGGTAGTCATTTTT TTTAATAAAGAAGAAAATTATGGTATATTACTTATTAAGCTGTTTAAGCGGATTGGTGATGAACACGTTTCGATTGGCTT GATAGTCATCGTGATTGTTCTGTGTATGCTGAACCATATATTTTTGTTCCACCATTATGAGCTACCTTTCTTCTGTATCA TTACATCAATAATTCATAACAAATTGTTAAAGAATTCTGTTATTAATAAGGGTTATCTATTCTGGGAGGATTGCTTGTCA AAATTAACAGGTAAACAATTTGCGGTTGTACATTATGTTACTTTGGGGGTGCGCTTTTGCTTGTAATTGTGCCTGTGTTG ATCTTTTTTGATTGTGTTAGTTTCAGGTTTCAGGCTAGCTCTTTCTTCTTTTAATTTGTTATTGTTATCAAACTAAACTT ACTCTATTAATTGATTTGATTCGATTTCATCCAGGATTTGCTACTGAATCGCTGGTGCACACAAAAGAAAACAGCCTTAT TCCTGAAATTCCAGCAACTGTTGCAGCTGTTAAGAACCCTTCTTCTAAGATTGTATATGATGACCACAATCATGAACGAT TTCCTCCAGGTGACCCTAGCAAAAGGGCATTTGCCTACTTTGTCCTAACAGGGGGTAGGTTTGTTTATGCCTCGCTAATC CGTCTCCTTGTCCTCAAGTTTGTGCTTAGCATGTCAGCAAGTAAGGATGTTCTTGCTCTGGCTTCGCTTGAAGTCGATCT CTCTAGCATTGAGCCAGGCACCACCGTGACTGTTAAGTGGCGTGGAAAGCCGGTCTTCATCAGGCGCAGGACAGAAGATG ATATTAAGTTGGCAAACAGTGTTGATGTTGGTTCTCTTCGTGATCCCCAGCAGGATTCAGAGAGAGTCAAGAACCCAGAA TGGCTCATTGTGATTGGGGTTTGCACACATCTTGGTTGCATTCCTTTGCCAAATGCTGGTGACTTTGGTGGATGGTTTTG CCCATGCCATGGTTCACACTATGATATTTCCGGAAGAATTAGGAAGGGACCAGCACCATACAATCTGGAGGTACCAACTT ATACCTTCTTGGAGGAAAACAAGTTGATGATTGGTTGAAAACCTCGCTGCTCTCCTTTGGTGGAATGAGTAATTTTTTTG ATTTATTGATAATGTCGAAATGCGCCACCAGACATATTTGGCCTTGGGTACTTATTTTGTTACGTTAGCAAGTGTTTATG TAACTGAAATTTTAAGTTTTACTGCTTGGCAAGACTTGTATCAATAATCCCCTGGCTTTTTTTCTTATCATCTCAATGTT TAGAAGCTGATGACTTCAGGCATATTGCATTGTATTTTTCATATCATGAATAACATCTGAAAATTTTGCTTAGCATATAA ATTGGGGAATATGGCATTTTGCTTATGCATACATTGTGTTGTGCTGGGTGTATAACGAATCAAAAAAGTAGTCACTGAAC ATGTTGAGAACACACAACTCGAAAGTAAGAATCGTAATTATTTAGTGAACTATACAGTCTATGCTGGTGAGCCTGAGGCG AATCTCAAAATTGTCAGCTGGATTTTTTTTCTTCTCTTTTGGTCTGAATCAACTAGGTGCTTGAACATACTGGTTTACCA CATTTGTTCCAAAGTACAAGCTGTGGCAATTTTTGATAGGCCCACTCGATAATTCCTTTACCTCCTGCTGTGCTGTTTGA TGAAATGGGTCACCTCTCAAGGATGCCTTTAACATAAACCATTCCCTTTTCACTAAACTTGAGATCCTTTCTCATTTCCT CTACTTGTTGGTCATCACCTTGAACAATGATCTCTGATAAGGTCCCATCATCTCCAACTATTAGTTTCACCTTAATCTGC TCCTTTCTAGATGCTCGAGTCCAGTAATAAGCACCTCTGCATAAATGCCCAAGGCATCAAAACTCACAGATATTAGGCCT CTCTGGACTACCTCCCGTTAAACTACCCTCATAAATGCATAAATAAGTCTAATCTAAATTTCAACAAAAAAAGAGTTATT GTCAATGCTTTCACTTACGCCAGTGGACTTAAGATGGTAATCCCAAACCAGTTATTACCAAAATCAGGGACGGTTATGGT AAGCACAAGTGCCACACTTGCAAGGCTGATGCAAGTGCAGAAAGTTAATAGTGCTGCTTGGCCCCTGCTGGGAACCATCA TTCCTTCAAACCTTCACAGAAGAAGAACAAAAACTGGTATTAGATGCATAGCTTCATTAAACTAATCATTAAAAAGAAAA AGAAGAAACAGGAGAAGACTGTAACTTGCTTAACCCACACCAATAAATGCATGTCAGAGACATATGATATAAAATGAAAG AAAATGACTCTTGCACAATACACATTGTTTTATACATTCATCTTAAACCATCACATACAACTATAGGGATTGACTATATA GCACACATTAGCCCCATACAAGGATTAGATTAATAATTTATCACCCAAAACATAAGGATTAAATTAGTAATTTTCAAGTG TCATTGAGTAATGCAATTATTTAACCTGATTACATTAATGGCTAAACGGTACTTACACTTCCAAAACTTGTGTTTTATTT TTAAAGTGGATGCCAAATTTATTCATGCAGATAGATGGTATATAATAACAAAGCTAGAGATGGAAACTGAGGGGGATGTA AAGGTGACATACGTAACTGTTTCTCCTCTATCAGTCACTTGAAAGTTGTTACGAGTGAAGAATGATAGTATCTCCCCTGC AACCTGATTTGGTGGCTTCTTTTCACCTTCACCTATGAAAGTCTTCTTCACAATCTACATTTTCACACTCCAATTGTCAA AAACACAAAACACCATATCAACAACAATAAGAAACCCTCAAAAACAAAAAATGTAACACAATTAGGACTTACTTTGGATT TGACAGAACGTTTGATGAGGGACCAAAGGCCAGGAACAGAGATAACAAAGAGACCAAGAGAAGTGTAATAACTGGCCATG GAATAACCAGCACTCTCTGTAAGCAACAGCAGAGAACTGGGGTTTAGGTGCACAAGAGCTGAAGATGAGGTGGCAGCGTC GTGAAGTGACACGTGGAGCTTCCTTGATCTTGGAGGGTGTTGTTGCTGCAGCTGCTGCCACCCGAGCCATGGTTGTAGTT TGTGGAGGTTGGTGTGAAATGGGAGAGAACAGAGAGGGTGTGGATGTGGGGATGATGATAACATCTTTGCTGCCATAGCT TGTTGCAGAGAAAGGATAAGGGGTGGGGGTTTAACATTTGTATGGTTCGTTTCTGAATGCGTCAGTTGATTTGAC
CDS sequence (LotjaGi1g1v0633700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTGAGGGTTGCAGCTAAGAGGCTTTCTTCTTCTCTCTCCTCCTCCTCTCCATGGAGGACCAACCACGCCGCCTCCGC GTTCCTCTCCCGGAACCCCCTCGCTCCACCGTCCTCCACCTCCGATGAACGCGGATCCGACCCGTTCTCTCTCCGACCCG AATTCTTTCTTCCCTTCAGAGGATTTGCTACTGAATCGCTGGTGCACACAAAAGAAAACAGCCTTATTCCTGAAATTCCA GCAACTGTTGCAGCTGTTAAGAACCCTTCTTCTAAGATTGTATATGATGACCACAATCATGAACGATTTCCTCCAGGTGA CCCTAGCAAAAGGGCATTTGCCTACTTTGTCCTAACAGGGGGTAGGTTTGTTTATGCCTCGCTAATCCGTCTCCTTGTCC TCAAGTTTGTGCTTAGCATGTCAGCAAGTAAGGATGTTCTTGCTCTGGCTTCGCTTGAAGTCGATCTCTCTAGCATTGAG CCAGGCACCACCGTGACTGTTAAGTGGCGTGGAAAGCCGGTCTTCATCAGGCGCAGGACAGAAGATGATATTAAGTTGGC AAACAGTGTTGATGTTGGTTCTCTTCGTGATCCCCAGCAGGATTCAGAGAGAGTCAAGAACCCAGAATGGCTCATTGTGA TTGGGGTTTGCACACATCTTGGTTGCATTCCTTTGCCAAATGCTGGTGACTTTGGTGGATGGTTTTGCCCATGCCATGGT TCACACTATGATATTTCCGGAAGAATTAGGAAGGGACCAGCACCATACAATCTGGAGGTACCAACTTATACCTTCTTGGA GGAAAACAAGTTGATGATTGGTTGA
Protein sequence (LotjaGi1g1v0633700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLRVAAKRLSSSLSSSSPWRTNHAASAFLSRNPLAPPSSTSDERGSDPFSLRPEFFLPFRGFATESLVHTKENSLIPEIP ATVAAVKNPSSKIVYDDHNHERFPPGDPSKRAFAYFVLTGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIE PGTTVTVKWRGKPVFIRRRTEDDIKLANSVDVGSLRDPQQDSERVKNPEWLIVIGVCTHLGCIPLPNAGDFGGWFCPCHG SHYDISGRIRKGPAPYNLEVPTYTFLEENKLMIG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 111 | 111 | - | – | |
| PANTHER | 1 | 274 | 274 | 1.2E-152 | ||
| PANTHER | 1 | 274 | 274 | 1.2E-152 | – | |
| SignalP_GRAM_POSITIVE | 1 | 24 | 24 | - | – | |
| SUPERFAMILY | 91 | 147 | 57 | 1.26E-14 | – | |
| Pfam | 96 | 145 | 50 | 1.4E-11 | ||
| Phobius | 112 | 133 | 22 | - | – | |
| TMHMM | 112 | 134 | 23 | - | – | |
| TIGRFAM | 130 | 274 | 145 | 1.2E-55 | ||
| Phobius | 134 | 274 | 141 | - | – | |
| SUPERFAMILY | 136 | 273 | 138 | 1.7E-40 | ||
| Gene3D | 146 | 274 | 129 | 1.7E-55 | ||
| CDD | 151 | 274 | 124 | 1.34463E-85 | – | |
| Pfam | 157 | 260 | 104 | 2.4E-11 | ||
| ProSiteProfiles | 204 | 272 | 69 | 17.537 | ||
| PRINTS | 212 | 223 | 12 | 2.9E-17 | ||
| PRINTS | 234 | 246 | 13 | 2.9E-17 | ||
| PRINTS | 246 | 258 | 13 | 2.9E-17 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Ubiquinol-cytochrome-c reductase activity | Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: CoQH2 + 2 ferricytochrome c = CoQ + 2 ferrocytochrome c + 2 H+. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Molecular function | Oxidoreductase activity, acting on diphenols and related substances as donors | Catalysis of an oxidation-reduction (redox) reaction in which a diphenol or related substance acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor. | ||
| Molecular function | 2 iron, 2 sulfur cluster binding | Interacting selectively and non-covalently with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi1g1v0633700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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