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LotjaGi3g1v0446400.8

Overview

Field Value
Gene ID LotjaGi3g1v0446400
Transcript ID LotjaGi3g1v0446400.8
Related isoforms 8
Lotus japonicus genome version Gifu v1.2
Description Aminotransferase-related family protein; TAIR: AT5G53970.1 Tyrosine transaminase family protein; Swiss-Prot: sp|Q9FN30|TAT2_ARATH Probable aminotransferase TAT2; TrEMBL-Plants: tr|A0A072VBJ4|A0A072VBJ4_MEDTR Tyrosine/nicotianamine family aminotransferase; Found in the gene: LotjaGi3g1v0446400
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:85979147..85984041) extracted from Lotus japonicus Gifu genome v1.2.

AAGAGAATGGAGGCAAGAATGAGGTGGTTGAAAATACCAAAGGAAATGAGTCTGCATTTGAAGATCATGTAGATGAAGAT GGAGATCTCACAATGTCTTGGCCAGAGTTGTTTGCACTGCAGTTGAGAACGGGATCCTGGTTCCCATCACAGGAACAAAT CCAGACGCTTTCCAATACAATCTACAAGGATTAATGATTATTTTGAAAACTATGATGTTAAGTACATACTCCTAGATACT AAACTGTTAATATGTAGCGGGTCTAGGACAACATAGTCTCTGTCTTTGATTATACTTTAGTATAGTTGATTCAATTTAAA GAAGCTTCTCATTCATGACCAAATCCTCTGAATTTTGATTATGGTTCTATTTGATTGTTGTTCACATCTAAATATCTAAT GACAACAAATGCATAAACTTGAGATCTGAATGGCTTGTCACAAAAACTGTTTACATGTCCACTATGTAAAACTTGAAAAA TGAAATTAATTACTATGAAAATTTCTAATATGAACTGAAAATTTTCCAACATCATCATCTACCAACACATATATATCCTT CAAGAGCTGGCCTAACTCCCATGCCTCCACCACCGCCGGTCATCCCCACCGTGCCGCAAAGGCGCAAACCTCCTAGCATC TGCTGCTGAACCATCACTGTCCAATTCAAACCCCACTCACTTCACTAGGCATTAGAATGTAAAAAGCATATAAAAACAAG AGAATGGAACCCACCACAGACACTGATAATACACAAGTGGGGTTTGTTTGTCGTTCACGATTGGCATTTCCTTCCTTTGG TTCATCGCTCTTCTGCTTCAGTTCTCATCACTTGTATTGGTTCACCAATCTCAGATAGACAGAGTGAATGGATAACGGAA GCGAGAGGTGGAATTTCCAAGGTAACAAAGGGCTCAATGCTTCAACCGTCTCTGTGAGTGGGGTCTATAGCATGCTCATG GATAGCATCAGCAACAATGTAGACAACAAAAAACCTCTGGTTCGCCTCTGTCGTGTTGATCCTACTGATAATCCATTGTT AAGGACTACCCATGTTGCTCCTGATGCTGTTGCAACTGCTGCTCACTCCATTAACTTCAATTGTTACCCTCCCACTGTTG GCTTACCTGATGCAAAGAGGTGTGTTTCCCCTCATCAATTATAGATAAAAATGCTATTAGTTTATCATGAAGTCATAGTA ATGTCTTTAGTAATTGACTAATTGGTAAGAAACTAAAAGGTTTTGTGGTTCAATAGAGATTTATACACACCCAAATTGCA TGTCCACATCCAAGCTTGGAGGATATAGGAATAGAAAAGAGAGAAGTAATATGATAGGTAAAGAAGAGAGATATGAAGAA AAAGTATGTGGAAATATGATGGAAGAGAAAACGAGTGTGAATGTATAAAAACTGTGTGGTTATATATTTTTGATGTGGAC AAACTTTGGTAAGTCTATGTTGGATTGATGAATGAGTCTCACATAGAATAAAAATGAATATGTTGAACAACGTACAAGTA GAGGACCATTTACTTAAAACTTTAAGGTTTTGAGTGAAGTGTATAGTATGCGAGGTGAAGGAAGAAGAGCTATGTACTGA ACAAGAAAATTGAAAGAGAAGCTTTTCACTGCTATTGTGCTGCGCCCCTCTTCTCTTTATAGTCCTTTATGGGAAAGGAA GGGGTTGAATCAATTGAATAGATATCCTGATTTGGGTGTGTTTTGTGAGTTGAGTTTTTGAGGCGAGAGAAGTGAGGAAG AGGCTTCCATTGTTTGAGTTTTTAAGAGGGGGGAAGGGTTTGGAGAATTTTTTAAAACCCTCCTAGACCCCCAAGACCCA CCATTAGTTGTTTTTTGGAGTTCCCCCAAATTGGAGGGTTTAGAGGAATTTGGAACTTGCAGACAAGGGAAGGGCTTACC CCTCTTCCCCCCCACTTCCCCTTCCCTTCAAAGCCTTCCCTTCTCCTCCACTAAAAACTCGCAAACAAGCCTTAAGCAAG TTCTCAGGTTCTCCATAGGGAAATCTAGCCTCACTTTGAAGAATGTTCCCGACTCAAACATATGATTGTCTCGAATTGAG GATAAATGTGATGGTCCAATTTTTTTTTCAGTGTACTCTCTGTTGGGTTAGTCACAGATGAAAATCAGTTTTCAACCTTT TCTGTCTCTTTTTGTGTCCTAATAAAAACATAATAGTTCCCTGAAATAATTTGACAACTTGAAGATAAAGGAAATAATTT TTTGTTAAGGTTTTCTATTTTCATTAGAAGGAGTTGGAAAGGAGCAGGTGATTTCTGTAATCCATTATTGACATTGGTAT TTCATATTTGCTAATCTTATCTAACACGTGAATATGGAATTTCTGGAGCCAAAAATCTATTAAACATGTTTAAATATGAT AATTTGGTGAAATATTGCCATTTCCTAAACAGGGCTATTGCAAATTATCTCTCTTCAGATCTTCCATACCAGTTATCACC AGACAATGTTTTTCTCACCGTTGGGGGCACACAAGCTATAGATATAATATTACATGTCCTTGCACGTCCTGGTGCCAACA TTCTCCTTCCAAGACCAGGGTACCCACTATATGATGCTCATGCTGCTTGTTGTCTCCTTGAAGTTCGGTACTTTGATCTC TCGCCTGAGAGAGGATGGGAGGTTGACCTTCATTCCCTTGAGGCTCTAGCAGATGAGAACACTGTGGCCATGGTTATAAT CAATCCAAGCAATCCATGTGGGAATGTGTGCACGTTGCAGCATTTAAAAAAGGTACATAATAGTCTTAAACTTCATTGTT TCAGAGTAGAGGAAACAAAATACTAAAGGGTGGCTGTTTAGGTTGTACTTTGATTCCTCGTAAATGTAAGGTCTCGGGCT CGAGTTATGAAGTAAACCTCTGTTGGGAGATCTAGCTAGCCTCACCTAGATGCGGATGTTCTGACTCGAACATGATTGAC TCCCATGAATGATACTTGTATTAGACTAAGAAAAGAGTAGGAAACAAAATGTGACAATTTTTCAGGACTCTTGTAGGTTG CTGAGACTGCGAGGAAACTTGGAATCTGTGTAATTTCTGACGAAGTTTATGCCCATGTAGCTTTTGGAAGCAATCCATTT GTGCCAATGGGAGTGTTTGCATCAATAGTGCCAGTTATCACAATTGGGTCCTTATCAAAAAGATGGTTAGTTCCTGGTTG GAGAATTGGCTGGATAGCCACAATGGACCCCCACGAAATTTTTCAAAAAACTGGGGTTAGTGTTTTTTTTACCTTTTGTT TTCAATCTTTTTATCCTTAAAATTTATCAGTCTAAGAGATTTCTCTTTTATCAAGATCAATTGGAGTAAAGATTTTTCAC AGCTTAGAAAACCTGATATTTGAATGATTATGCAATTGTTTTCTTTCTTTATCAGATCAAGACAAATATCATCAGCTATT TGGAGATCACTTCTGACCCTCCAACCTTCATGCAGGTAACAAATGGAAACTATAGCATAAGCAAAACGCAAAAGTAACAG AAAAAAACCAACTAGTATTCTTCGGCCGATCGAATAGATCAACAAAAGCATATATTCAGAATTTAATACGTGTTTGTTTG CTTATGCTTGTATCCTTTTTTGTTCATTTTGTTTTCCCTAAAACAAAAATGACAGAAAGTTAGGCTTGCAGGCTGCAATA CCTCAAATCCTTGAGAGAACAAATGATGATTTCCATTTTAAGAATCTGAATATGATGAGAGAGGCTGCAAACATATTCTA TGATGTATGTAAGGAGATCCCTTGCTTGACATGCCCTCACAAACCCGAAGGAGCCATGGCTGCAATGGTAAGTGGCATAA AGAATTCTTAGGCTTTCATCATGCTATAAATTTAACATGGGGTCATCTTACTCATGATCAATTGACAGTAAATTGAATGA ATCAGGTGAAGATTAACTTTTCAAAAGTTAAGGACATTGTTGATGATTTGGATTTCTGTGTCAAGCTGGCCAAAGAGGAA TCTGTAATTCTTCTTCCTGGTAAGAATTCAATTGGTAAATTGAATAAAGTCATATATGACGAGAGTTTCTCTTTATTGGT GTTATTATACTTGCTTGCAGGTGTTACTGTTGGACTAAAGAATTGGCTTCGGATTAGTCTTGCTGTTGACCCTTCTGATC TTGAAGAGGGCCTAAGCAGGATGAAAGCATTCAGCCTTCGGTATGCCAAGATGTCATAAATCATGTCACACGGGAGGGTG TGTTGAATCTTAGGTCTGAGATATCTCCTAATGAGCCATCTTTAAGGCAAGATATATGTATCAAGAAACTGCATTTTATA TTATGTTTCATGATGCTCTAGGTTCAAACTTGAATTATGGCTTTTCTATTTGTCTGATCTGATGGAAATATCAGAACAAA TTTCCTTATCAAAATGGAATAAAAAAACAAATAGACTCAGTGAGATCTGGAGGAGAAACTCATCTTGAACCAGTGAAACT CGACACACTGATCCAACTTCATATAAATGTGAAATCTGTATAGAAAATGACCTCCTTTTCCTTTCTCTAACCATTCCTGA CCTGACCACTCGTTGGGAATATGTTAGAGCAGTTAGACTGTTGCTTGTAGGGGTGTATGCTCTAACCTACATCAGTAATC TGACCAGACTAGTAACTTGGCAATTAAAGGCCAGGTCATACATCTCAGCACTCACCATCTATGATGACTAGAGTTACGAG ACTCCTGAATAATTTAGCAACTCCCTTCCGTCAATCACCTACGCTTCTCTAGTCAGGACGAGCCGAGCCAATCATGGATT ACCCCCGACCATGTTGTCCTGAAACTTGTTGAATCTCTTGGACTTGCTATTCTTTGGGGTAACCAACCAACACATCCCTC TCTATTGTCAACGAG
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0446400.8) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGATAACGGAAGCGAGAGGTGGAATTTCCAAGGTAACAAAGGGCTCAATGCTTCAACCGTCTCTGTGAGTGGGGTCTA TAGCATGCTCATGGATAGCATCAGCAACAATGTAGACAACAAAAAACCTCTGGTTCGCCTCTGTCGTGTTGATCCTACTG ATAATCCATTGTTAAGGACTACCCATGTTGCTCCTGATGCTGTTGCAACTGCTGCTCACTCCATTAACTTCAATTGTTAC CCTCCCACTGTTGGCTTACCTGATGCAAAGAGGGCTATTGCAAATTATCTCTCTTCAGATCTTCCATACCAGTTATCACC AGACAATGTTTTTCTCACCGTTGGGGGCACACAAGCTATAGATATAATATTACATGTCCTTGCACGTCCTGGTGCCAACA TTCTCCTTCCAAGACCAGGGTACCCACTATATGATGCTCATGCTGCTTGTTGTCTCCTTGAAGTTCGGTACTTTGATCTC TCGCCTGAGAGAGGATGGGAGGTTGACCTTCATTCCCTTGAGGCTCTAGCAGATGAGAACACTGTGGCCATGGTTATAAT CAATCCAAGCAATCCATGTGGGAATGTGTGCACGTTGCAGCATTTAAAAAAGGTTGCTGAGACTGCGAGGAAACTTGGAA TCTGTGTAATTTCTGACGAAGTTTATGCCCATGTAGCTTTTGGAAGCAATCCATTTGTGCCAATGGGAGTGTTTGCATCA ATAGTGCCAGTTATCACAATTGGGTCCTTATCAAAAAGATGGTTAGTTCCTGGTTGGAGAATTGGCTGGATAGCCACAAT GGACCCCCACGAAATTTTTCAAAAAACTGGGATCAAGACAAATATCATCAGCTATTTGGAGATCACTTCTGACCCTCCAA CCTTCATGCAGGCTGCAATACCTCAAATCCTTGAGAGAACAAATGATGATTTCCATTTTAAGAATCTGAATATGATGAGA GAGGCTGCAAACATATTCTATGATGTATGTAAGGAGATCCCTTGCTTGACATGCCCTCACAAACCCGAAGGAGCCATGGC TGCAATGGTGAAGATTAACTTTTCAAAAGTTAAGGACATTGTTGATGATTTGGATTTCTGTGTCAAGCTGGCCAAAGAGG AATCTGTAATTCTTCTTCCTGGTGTTACTGTTGGACTAAAGAATTGGCTTCGGATTAGTCTTGCTGTTGACCCTTCTGAT CTTGAAGAGGGCCTAAGCAGGATGAAAGCATTCAGCCTTCGGTATGCCAAGATGTCATAA
Download CDS Sequence

Protein sequence (LotjaGi3g1v0446400.8) extracted from Lotus japonicus Gifu v1.2 Proteins.

MDNGSERWNFQGNKGLNASTVSVSGVYSMLMDSISNNVDNKKPLVRLCRVDPTDNPLLRTTHVAPDAVATAAHSINFNCY PPTVGLPDAKRAIANYLSSDLPYQLSPDNVFLTVGGTQAIDIILHVLARPGANILLPRPGYPLYDAHAACCLLEVRYFDL SPERGWEVDLHSLEALADENTVAMVIINPSNPCGNVCTLQHLKKVAETARKLGICVISDEVYAHVAFGSNPFVPMGVFAS IVPVITIGSLSKRWLVPGWRIGWIATMDPHEIFQKTGIKTNIISYLEITSDPPTFMQAAIPQILERTNDDFHFKNLNMMR EAANIFYDVCKEIPCLTCPHKPEGAMAAMVKINFSKVKDIVDDLDFCVKLAKEESVILLPGVTVGLKNWLRISLAVDPSD LEEGLSRMKAFSLRYAKMS
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PIRSF
PIRSF000517
1 419 419 2.6E-175
IPR005958
PANTHER
PTHR45744:SF11
6 418 413 1.7E-202 –
PANTHER
PTHR45744
6 418 413 1.7E-202 –
TIGRFAM
TIGR01265
8 414 407 7.8E-155
IPR005958
SUPERFAMILY
SSF53383
40 411 372 1.46E-81
IPR015424
Pfam
PF00155
46 407 362 2.3E-55
IPR004839
Gene3D
G3DSA:3.90.1150.10
47 411 365 1.4E-110
IPR015422
CDD
cd00609
55 410 356 1.2806E-80 –
Gene3D
G3DSA:3.40.640.10
62 307 246 1.4E-110
IPR015421
ProSitePatterns
PS00105
249 262 14 -
IPR004838

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0006520
Biological process Cellular amino acid metabolic process The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells.
Subterm of
GO:0008483
Molecular function Transaminase activity Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid.
Subterm of
GO:0009058
Biological process Biosynthetic process The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
Subterm of
GO:0030170
Molecular function Pyridoxal phosphate binding Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0446400.8, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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