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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR006203
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 10 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.849s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0357339.1
n.a. PREDICTED: galactokinase-like [Glycine max] gi|356565073|ref|XP_003550769.1| chr0 188139972 188145393 -
2 domain predictions
1 GO term
Lj1g3v4942840.1
n.a. PREDICTED: mevalonate kinase-like [Glycine max] gi|356505870|ref|XP_003521712.1| chr1 60098524 60099386 -
2 domain predictions
1 GO term
Lj1g3v4943880.1
n.a. PREDICTED: mevalonate kinase-like [Glycine max] gi|356505870|ref|XP_003521712.1| chr1 60108917 60112380 -
2 domain predictions
1 GO term
Lj2g3v3413250.1
n.a. homoserine kinase-like [Glycine max] gi|359807161|ref|NP_001241610.1| chr2 43126563 43129195 +
2 domain predictions
1 GO term
Lj4g3v2263880.1
n.a. PREDICTED: galactokinase-like [Cicer arietinum] gi|502150796|ref|XP_004508128.1| chr4 31361898 31367834 -
2 domain predictions
1 GO term
LotjaGi1g1v0000900.1
n.a. Homoserine kinase; TAIR: AT2G17265.1 homoserine kinase; Swiss-Prot: sp|Q8L7R2|KHSE_ARATH Homoserine kinase; TrEMBL-Plants: tr|D2DKF1|D2DKF1_SOYBN Homoserine kinase; Found in the gene: LotjaGi1g1v0000900 LjG1.1_chr1 357693 361368 -
2 domain predictions
1 GO term
LotjaGi1g1v0000900.2
n.a. Homoserine kinase; TAIR: AT2G17265.1 homoserine kinase; Swiss-Prot: sp|Q8L7R2|KHSE_ARATH Homoserine kinase; TrEMBL-Plants: tr|D2DKF1|D2DKF1_SOYBN Homoserine kinase; Found in the gene: LotjaGi1g1v0000900 LjG1.1_chr1 357785 361328 -
2 domain predictions
1 GO term
LotjaGi1g1v0000900.3
n.a. Homoserine kinase; TAIR: AT2G17265.1 homoserine kinase; Swiss-Prot: sp|Q8L7R2|KHSE_ARATH Homoserine kinase; TrEMBL-Plants: tr|D2DKF1|D2DKF1_SOYBN Homoserine kinase; Found in the gene: LotjaGi1g1v0000900 LjG1.1_chr1 360062 361195 -
2 domain predictions
1 GO term
LotjaGi4g1v0332900.1
n.a. Galactokinase; TAIR: AT3G06580.1 Mevalonate/galactokinase family protein; Swiss-Prot: sp|Q9SEE5|GALK1_ARATH Galactokinase; TrEMBL-Plants: tr|I1MRT3|I1MRT3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0332900 LjG1.1_chr4 71191781 71197357 +
2 domain predictions
1 GO term
LotjaGi6g1v0260600.1
n.a. Galactokinase; TAIR: AT3G06580.1 Mevalonate/galactokinase family protein; Swiss-Prot: sp|Q9SEE5|GALK1_ARATH Galactokinase; TrEMBL-Plants: tr|I1MRT3|I1MRT3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0260600 LjG1.1_chr6 57326429 57332243 +
2 domain predictions
1 GO term