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LotjaGi1g1v0000900.2

Overview

Field Value
Gene ID LotjaGi1g1v0000900
Transcript ID LotjaGi1g1v0000900.2
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Homoserine kinase; TAIR: AT2G17265.1 homoserine kinase; Swiss-Prot: sp|Q8L7R2|KHSE_ARATH Homoserine kinase; TrEMBL-Plants: tr|D2DKF1|D2DKF1_SOYBN Homoserine kinase; Found in the gene: LotjaGi1g1v0000900
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:357785..361328) extracted from Lotus japonicus Gifu genome v1.2.

ATATTGATATCCTATTAATTAATAACGATTAATAACAATACTACTAGTACTAATACAGTAATACTTATACTTGGATCGAT CATTCAATCATCCAACAGACCAACACCAAGAGGAAGAGGCAGCACTGCACACGATGGCGGCAACCACATCTTCATGGTTA TTATGTCCACTGAATTTTAAAGGCAGCAGCAGCAACAGGATGGGAATCCCTCCAACAACAATCAGAATCAGATGCAACCT CTCTGCGAACCACAAGTCCACCACACTTGCGACGACGGAGTCCGAGCCTAAACCAATTTACACATCGGTCAAAACCTTTG CTCCGGCCACCGTGGCAAATCTAGGTCCGGGCTTCGATTTCCTCGGCTGCGCGGTCGATGGCCTTGGGGACACTGTCTCA CTCAGGGTGGACCCGCAAGTTCATCCGGGTGAGATTTGCATCTCACACATTTCCGGCCAAAACCCTAACAAGCTCAGCAA AAACCCTCTTTGGAATTGCGCTGGTATCGCCGCCATTGAAGTCATGAAAATGCTTGGCATTCGATCCGTTGGTCTCTCAC TCTCCCTCGACAAGGGTTTGCCCTTAGGAAGCGGTCTGGGTTCCAGCGCTGCCAGCGCCGCCGCCGCCGCCGTCGCTGTC AATGAGATTTTCGGCAACAAATTGACCGTTGACGACCTTGTTCTTGCTTCCTTAAAATCCGAAGAGAAGGTTTCTGGTTA TCACGCCGATAACGTCGCACCCTCCATCATGGGGGGTTTTGTGCTCATTCGCGGTTACGAGCCATTGGACTTGATGCCGT TGAAGTTCCCCCCCGAGAAGAACTTGTTCTTCGTGCTTGTCACTCCTGAATTCGAAGCTCCCACCAAGAAGATGCGAGCG GCACTCCCTGCTGAGATTGGTATGCCGCACCATGTGTGGAATTGTAGTCAAGCAGGTGCTCTGGTGGCATCGGTGTTACA AGGGGATTTGGTGGGCTTGGGCAAGGCTTTGTCCTCCGATAAGATCGTTGAGCCGAGGCGAGCCCCTTTGATTCCTGGCA TGGAGGCTGTCAAGAGGGCTGCCATTGAGGCTGGGGCTTTTGGTTGCACCATCAGTGGTGCTGGCCCCACCGCTGTTGCT GTCATTGATGATGAGCACGCAGGACACCTGATTGGGAAACATATGGTTGAGGCTTTTCTCAAGGACGGAAATTTGAAAGC TTCTGCAAATGTTCAGCAGCTTGATCGGGTTGGTGCTAGACTTATTAGTAGCAGTAACGAAAATTGAAGCCTCTTATTTG GTATGTTCTGCTCCTCTCCTAGCAAAGCCAATTTTTTAAGTGTTTTATGTTAATAATCAATGTGCACTGTGCTGTGGTTT ATAGACTGATCAATGTTCTGGTTTACTATTGACTTCCATGCACTTGCTCCAAATGAGCATAATTATTTGTGAATGCTTTG ATCCGTGGCACTTTTAGGAGTGTGGTTATCTGGAGAGAACTGGATAATTTCATTCTCGTTTTGGTGATGATTGCTTGTCT GCTAGCGGGATTTTACTGATAAAAATACATCAGCTGATTCATATCACACTTTTTCTTGGACAATCTTTGACTCTTTGCTT TGCTAAAGGTGGATTATTGTTTGTGATTTTTGAGTTGCCATGATATAAAGCACTCTAAGTGCTCTGTCATTTACATTTGT TTGTTTAAATTATAATGGATCTCCCTTCTGGAGCAATTTGGGGACTCTGTTAATAGAATGTATCAAGTGTGTGTATTTTT TTTGGGGGGGGGGGGGGCATCTACAAACTTGTAAGTGATCTAAGTTACAGCCAACCTCTACTTTCTTCTTTAGCCTAGGT CAGCCTCTACCTCTAAAAAATGGAGAACATTATACAGAACAGAGCTGAAGGAAACCAAACTCTTTCCTAGTGTCCTATGA ATGTTACTTGTTTGAGGATGTGATAATGTTATTTTAAATACCTGTACCCTTGTGATTTTGTGAACTACCTTAAAATCAAT CATGAACTTCATTTCTAAAGAACAATTTCTGTACTGTTAGTTTCCTTCTCAATATTTGATATACCTGATTCATTTTATGT CAGGAAAGTCCACAGGCACTTTGTTCACAATCCCACCCATTTATGTTCCTAGCTTCTTGAAATTGATTATAATATTAAGC CTCTAGATTACAAAATTTGGATGAGTATTGCATAAGTTTTCCTTCATTTAAAGTGAATTTCATGGCTGAAGTTCCCTAGA AATCTGGCACAGCTTTTCTTATTTCTTGCAAGCGAGTATTTCTCAATTTGGTTTGCATATTTGCATCAGCTTACTGATAT CTAACTTCAATATGCTTACCAGAGACTTTGTGCAGGTTTTAAATATTGGATTTTTCTAGACTTTTCTGGAGCACTACAAG TGCTGACCTGTCACGTGCATTTGATCAACAAAGCAGCATTCGAGTGTGGAGGTCTGAATGAAAAGAGAAACATTAGAACC AATATGGGTGCTGGTTTTAGGAGACAATAATTTAATTAGTTGAATAATGATGAAAGACCACGATTTGGTCAATTTATGGT GAACCCTAAGACATCTTTAGAGAAATGCTTTCTATGCTTCTGTTCTTTTCTTCATCTTGCTACTTGAGAAAAAGTCCTCA GCAGTCTTTCCTTCATTGTTAATATTGCTTTCAAGTAGCATGTAGAATGTTTGTCATTAATTGTTCTTTTTCAATTTATC ATTTCAAAGCCAATGTTCTATGATTCTTTCTTGGTAAAATCTTAGCAAAGTTTGGTGTATAATTGTGGTAATTAAGTTTT AGCAAAAAGATGGGTTGACCTAAACTGAGTAGAATGTCATCAACTTGGATTGTTTCGATGAACTTGATAATCCAAATCCA ACTAATGTAATTGATTCATATTTTCTTGCTTAATCTGCTCACTTAACGAGACACAAGAAGAGATGAGAAGAGTTAAGGCG CGTTGCGTGGAATTGGATTTGGACCTGGATCTAATTTTGACTTTTCTTGGCAGTTCTCACTCCTTCGCGAGCTTTGGAGA GAGGAGGGTATGCTTTGCTTTCGATTGTGATCTTCGCGAATTTTATGTGAGGGGTATCAAGGCAACATTTGCACCTGAAG TGTCTGTTTTGTGAGGTTTTGGAGTGGCGTTTAGACTGGTCTCTCCTCGTCTCTTGTGCGCCCAACATTAGATTAACCAA TGTAATTGTTTTAGGTTGCGATGTCAGTGGCTCTTGGCTATGATCTCGTTGTATTGGATGCTGATTCGCCCGAGTCGATG CGTGCACGTGCGATGTCAATGGCTCTTGCTGCTGGAGTTTGTCATGAGGTTGTTGTTCTCGCGCCTGAAGCTATGACCGT TGGTTCTCTTCTCTTATGTTTTTGGGTTTTTAGCTTTGATGTTGTTGCCATTGGTAGAATTTTGTGTATTTTGCGTTTTT GGCTTATTTCGATGTTTTCTTTGGTGGGCCATTATCTTGCCTAGGTTGTGTATCGTACTTTGCTTACTTTGTTGGCGTTC GCGTTGTACTTCAAGAGGATTTGT
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0000900.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCGGCAACCACATCTTCATGGTTATTATGTCCACTGAATTTTAAAGGCAGCAGCAGCAACAGGATGGGAATCCCTCC AACAACAATCAGAATCAGATGCAACCTCTCTGCGAACCACAAGTCCACCACACTTGCGACGACGGAGTCCGAGCCTAAAC CAATTTACACATCGGTCAAAACCTTTGCTCCGGCCACCGTGGCAAATCTAGGTCCGGGCTTCGATTTCCTCGGCTGCGCG GTCGATGGCCTTGGGGACACTGTCTCACTCAGGGTGGACCCGCAAGTTCATCCGGGTGAGATTTGCATCTCACACATTTC CGGCCAAAACCCTAACAAGCTCAGCAAAAACCCTCTTTGGAATTGCGCTGGTATCGCCGCCATTGAAGTCATGAAAATGC TTGGCATTCGATCCGTTGGTCTCTCACTCTCCCTCGACAAGGGTTTGCCCTTAGGAAGCGGTCTGGGTTCCAGCGCTGCC AGCGCCGCCGCCGCCGCCGTCGCTGTCAATGAGATTTTCGGCAACAAATTGACCGTTGACGACCTTGTTCTTGCTTCCTT AAAATCCGAAGAGAAGGTTTCTGGTTATCACGCCGATAACGTCGCACCCTCCATCATGGGGGGTTTTGTGCTCATTCGCG GTTACGAGCCATTGGACTTGATGCCGTTGAAGTTCCCCCCCGAGAAGAACTTGTTCTTCGTGCTTGTCACTCCTGAATTC GAAGCTCCCACCAAGAAGATGCGAGCGGCACTCCCTGCTGAGATTGGTATGCCGCACCATGTGTGGAATTGTAGTCAAGC AGGTGCTCTGGTGGCATCGGTGTTACAAGGGGATTTGGTGGGCTTGGGCAAGGCTTTGTCCTCCGATAAGATCGTTGAGC CGAGGCGAGCCCCTTTGATTCCTGGCATGGAGGCTGTCAAGAGGGCTGCCATTGAGGCTGGGGCTTTTGGTTGCACCATC AGTGGTGCTGGCCCCACCGCTGTTGCTGTCATTGATGATGAGCACGCAGGACACCTGATTGGGAAACATATGGTTGAGGC TTTTCTCAAGGACGGAAATTTGAAAGCTTCTGCAAATGTTCAGCAGCTTGATCGGGTTGGTGCTAGACTTATTAGTAGCA GTAACGAAAATTGA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0000900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MAATTSSWLLCPLNFKGSSSNRMGIPPTTIRIRCNLSANHKSTTLATTESEPKPIYTSVKTFAPATVANLGPGFDFLGCA VDGLGDTVSLRVDPQVHPGEICISHISGQNPNKLSKNPLWNCAGIAAIEVMKMLGIRSVGLSLSLDKGLPLGSGLGSSAA SAAAAAVAVNEIFGNKLTVDDLVLASLKSEEKVSGYHADNVAPSIMGGFVLIRGYEPLDLMPLKFPPEKNLFFVLVTPEF EAPTKKMRAALPAEIGMPHHVWNCSQAGALVASVLQGDLVGLGKALSSDKIVEPRRAPLIPGMEAVKRAAIEAGAFGCTI SGAGPTAVAVIDDEHAGHLIGKHMVEAFLKDGNLKASANVQQLDRVGARLISSSNEN
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:3.30.230.10
53 228 176 3.8E-44
IPR014721
PANTHER
PTHR20861
54 372 319 7.7E-140 –
PANTHER
PTHR20861:SF1
54 372 319 7.7E-140 –
SUPERFAMILY
SSF54211
58 220 163 8.35E-29
IPR020568
Hamap
MF_00384
59 371 313 26.758
IPR000870
TIGRFAM
TIGR00191
61 371 311 1.7E-62
IPR000870
PRINTS
PR00958
66 81 16 2.6E-29 –
Pfam
PF00288
143 208 66 8.5E-12
IPR006204
ProSitePatterns
PS00627
149 160 12 -
IPR006203
PRINTS
PR00958
156 171 16 2.6E-29 –
PRINTS
PR00958
195 208 14 2.6E-29 –
Gene3D
G3DSA:3.30.70.890
229 359 131 7.3E-34
IPR036554
SUPERFAMILY
SSF55060
230 339 110 1.6E-28
IPR036554
PRINTS
PR00958
235 252 18 2.6E-29 –
Pfam
PF08544
272 337 66 1.5E-9
IPR013750
PRINTS
PR00958
315 330 16 2.6E-29 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004413
Molecular function Homoserine kinase activity Catalysis of the reaction: L-homoserine + ATP = O-phospho-L-homoserine + ADP + 2 H(+).
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006566
Biological process Threonine metabolic process The chemical reactions and pathways involving threonine (2-amino-3-hydroxybutyric acid), a polar, uncharged, essential amino acid found in peptide linkage in proteins.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0000900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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