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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR006712
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 9 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 8.744s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v4350060.1
n.a. PREDICTED: homeobox-leucine zipper protein HAT14-like [Glycine max] gi|356530687|ref|XP_003533912.1| chr1 51143540 51145985 +
2 domain predictions
1 GO term
Lj2g3v1989250.1
n.a. Homeobox-leucine zipper protein HOX17 [Medicago truncatula] gi|357482123|ref|XP_003611347.1| chr2 29825512 29827431 -
2 domain predictions
1 GO term
Lj3g3v0515110.1
n.a. PREDICTED: homeobox-leucine zipper protein HAT3-like [Glycine max] gi|356504593|ref|XP_003521080.1| chr3 5937976 5941117 -
2 domain predictions
1 GO term
Lj4g3v1218330.1
n.a. PREDICTED: homeobox-leucine zipper protein HAT4-like [Glycine max] gi|356563350|ref|XP_003549927.1| chr4 18141092 18142531 -
2 domain predictions
1 GO term
Lj4g3v1218330.2
n.a. PREDICTED: homeobox-leucine zipper protein HAT4-like [Glycine max] gi|356563350|ref|XP_003549927.1| chr4 18141092 18143209 -
2 domain predictions
1 GO term
LotjaGi1g1v0279600.1
n.a. Homeobox associated leucine zipper protein; TAIR: AT5G06710.1 homeobox leucine zipper protein; Swiss-Prot: sp|P46665|HAT14_ARATH Homeobox-leucine zipper protein HAT14; TrEMBL-Plants: tr|I1L2K9|I1L2K9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0279600 LjG1.1_chr1 68230913 68233671 -
2 domain predictions
1 GO term
LotjaGi2g1v0421000.1
n.a. Homeobox associated leucine zipper protein; TAIR: AT5G47370.1 Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein; Swiss-Prot: sp|P46601|HAT2_ARATH Homeobox-leucine zipper protein HAT2; TrEMBL-Plants: tr|B7FJ62|B7FJ62_MEDTR Homeobox associated leucine zipper protein; Found in the gene: LotjaGi2g1v0421000 LjG1.1_chr2 91897586 91900145 -
2 domain predictions
1 GO term
LotjaGi3g1v0065200.1
n.a. Homeobox associated leucine zipper protein; TAIR: AT3G60390.1 homeobox-leucine zipper protein 3; Swiss-Prot: sp|P46602|HAT3_ARATH Homeobox-leucine zipper protein HAT3; TrEMBL-Plants: tr|A0A151RB95|A0A151RB95_CAJCA Homeobox-leucine zipper protein HAT3; Found in the gene: LotjaGi3g1v0065200 LjG1.1_chr3 6876562 6880669 -
2 domain predictions
1 GO term
LotjaGi4g1v0200100.1
n.a. Homeobox associated leucine zipper protein; TAIR: AT4G16780.1 homeobox protein 2; Swiss-Prot: sp|Q05466|HAT4_ARATH Homeobox-leucine zipper protein HAT4; TrEMBL-Plants: tr|A0A151SKY7|A0A151SKY7_CAJCA Homeobox-leucine zipper protein HAT4; Found in the gene: LotjaGi4g1v0200100 LjG1.1_chr4 46354635 46357922 -
2 domain predictions
1 GO term