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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR008905
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 10 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.613s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0108599.1
n.a. PREDICTED: eukaryotic translation initiation factor 3 subunit C-like [Cicer arietinum] gi|502076739|ref|XP_004485443.1| chr0 46963629 46964896 +
2 domain predictions
4 GO terms
Lj0g3v0236679.1
n.a. PREDICTED: eukaryotic translation initiation factor 3 subunit C-like [Glycine max] gi|356505465|ref|XP_003521511.1| chr0 122663961 122665209 -
2 domain predictions
4 GO terms
Lj1g3v4763830.1
n.a. PREDICTED: eukaryotic translation initiation factor 3 subunit C-like [Glycine max] gi|356524672|ref|XP_003530952.1| chr1 57166257 57170553 +
2 domain predictions
4 GO terms
Lj1g3v4763830.2
n.a. PREDICTED: eukaryotic translation initiation factor 3 subunit C-like [Glycine max] gi|356512984|ref|XP_003525194.1| chr1 57166257 57170553 +
2 domain predictions
4 GO terms
Lj1g3v4763840.1
n.a. PREDICTED: eukaryotic translation initiation factor 3 subunit C-like [Glycine max] gi|356524672|ref|XP_003530952.1| chr1 57166257 57171008 +
2 domain predictions
4 GO terms
LotjaGi1g1v0742700.1
n.a. Eukaryotic translation initiation factor 3 subunit C; TAIR: AT3G56150.1 eukaryotic translation initiation factor 3C; Swiss-Prot: sp|Q9XHM1|EIF3C_MEDTR Eukaryotic translation initiation factor 3 subunit C; TrEMBL-Plants: tr|A0A0L9U9H6|A0A0L9U9H6_PHAAN Eukaryotic translation initiation factor 3 subunit C; Found in the gene: LotjaGi1g1v0742700 LjG1.1_chr1 131631878 131636875 +
2 domain predictions
4 GO terms
LotjaGi1g1v0742700.2
n.a. Eukaryotic translation initiation factor 3 subunit C; TAIR: AT3G56150.1 eukaryotic translation initiation factor 3C; Swiss-Prot: sp|Q9XHM1|EIF3C_MEDTR Eukaryotic translation initiation factor 3 subunit C; TrEMBL-Plants: tr|A0A0L9U9H6|A0A0L9U9H6_PHAAN Eukaryotic translation initiation factor 3 subunit C; Found in the gene: LotjaGi1g1v0742700 LjG1.1_chr1 131632455 131636452 +
2 domain predictions
4 GO terms
LotjaGi5g1v0284500.1
n.a. Eukaryotic translation initiation factor 3 subunit C; TAIR: AT3G56150.1 eukaryotic translation initiation factor 3C; Swiss-Prot: sp|Q9XHM1|EIF3C_MEDTR Eukaryotic translation initiation factor 3 subunit C; TrEMBL-Plants: tr|A0A0L9U9H6|A0A0L9U9H6_PHAAN Eukaryotic translation initiation factor 3 subunit C; Found in the gene: LotjaGi5g1v0284500 LjG1.1_chr5 60112015 60118612 +
2 domain predictions
4 GO terms
LotjaGi5g1v0284500.2
n.a. Eukaryotic translation initiation factor 3 subunit C; TAIR: AT3G56150.1 eukaryotic translation initiation factor 3C; Swiss-Prot: sp|Q9XHM1|EIF3C_MEDTR Eukaryotic translation initiation factor 3 subunit C; TrEMBL-Plants: tr|A0A0L9U9H6|A0A0L9U9H6_PHAAN Eukaryotic translation initiation factor 3 subunit C; Found in the gene: LotjaGi5g1v0284500 LjG1.1_chr5 60112299 60118117 +
2 domain predictions
4 GO terms
LotjaGi5g1v0284500.3
n.a. Eukaryotic translation initiation factor 3 subunit C; TAIR: AT3G56150.1 eukaryotic translation initiation factor 3C; Swiss-Prot: sp|Q9XHM1|EIF3C_MEDTR Eukaryotic translation initiation factor 3 subunit C; TrEMBL-Plants: tr|I1JQD9|I1JQD9_SOYBN Eukaryotic translation initiation factor 3 subunit C; Found in the gene: LotjaGi5g1v0284500 LjG1.1_chr5 60112616 60118118 +
2 domain predictions
4 GO terms