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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR010304
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 5 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 7.637s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj4g3v0013170.1
n.a. PREDICTED: survival of motor neuron-related-splicing factor 30-like [Cicer arietinum] gi|502126585|ref|XP_004499363.1| chr4 160903 166842 +
2 domain predictions
4 GO terms
Lj4g3v0013170.2
n.a. PREDICTED: survival of motor neuron-related-splicing factor 30-like [Cicer arietinum] gi|502126585|ref|XP_004499363.1| chr4 160903 166842 +
2 domain predictions
4 GO terms
LotjaGi2g1v0336800.1
n.a. Survival motor neuron protein; TAIR: AT4G16570.1 protein arginine methyltransferase 7; Swiss-Prot: sp|Q9VV74|SMN_DROME Survival motor neuron protein; TrEMBL-Plants: tr|I1J4R1|I1J4R1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0336800 LjG1.1_chr2 81396372 81399325 +
2 domain predictions
4 GO terms
LotjaGi4g1v0001700.1
n.a. Survival of motor neuron-related-splicing factor 30; TAIR: AT2G02570.1 nucleic acid binding/RNA binding protein; Swiss-Prot: sp|Q6DEY1|SPF30_XENTR Survival of motor neuron-related-splicing factor 30; TrEMBL-Plants: tr|I3SL72|I3SL72_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0001700 LjG1.1_chr4 344459 349509 +
2 domain predictions
4 GO terms
LotjaGi4g1v0001700.2
n.a. Survival of motor neuron-related-splicing factor 30; TAIR: AT2G02570.1 nucleic acid binding/RNA binding protein; Swiss-Prot: sp|Q6DEY1|SPF30_XENTR Survival of motor neuron-related-splicing factor 30; TrEMBL-Plants: tr|I3SL72|I3SL72_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0001700 LjG1.1_chr4 344523 349049 +
2 domain predictions
4 GO terms